BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	1,642,639	G→T	intergenic (+41/‑126)	dicA → / → ydfA	Qin prophage; putative regulator for DicB/Qin prophage; uncharacterized protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	1,642,639	0	G	T	100.0%	997.5 / NA	297	intergenic (+41/‑126)	dicA/ydfA	Qin prophage; putative regulator for DicB/Qin prophage; uncharacterized protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (173/124); total (173/124)

Only 100 of 297 total aligned reads displayed.

AATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGC  >  CP009273/1642492‑1642785

aaTCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCt                                                                                                                                                  >  1:3121303/1‑150 (MQ=255)

 aTCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCta                                                                                                                                                 >  2:355333/1‑150 (MQ=255)

 aTCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCta                                                                                                                                                 >  1:632748/1‑150 (MQ=255)

  tCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCtat                                                                                                                                                <  2:401077/150‑1 (MQ=255)

    aGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAg                                                                                                                                              <  1:2085141/150‑1 (MQ=255)

     gAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGc                                                                                                                                             >  1:3369440/1‑150 (MQ=255)

      aaCAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCa                                                                                                                                            >  1:798202/1‑150 (MQ=255)

          ggATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACa                                                                                                                                        >  2:295439/1‑150 (MQ=255)

               cccAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATc                                                                                                                                   >  1:2594524/1‑150 (MQ=255)

                ccAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCa                                                                                                                                  <  1:2547115/150‑1 (MQ=255)

                 cAGCTCGCCGAAATGCGAGCTCGTGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCAc                                                                                                                                 <  2:1779960/150‑1 (MQ=255)

                 cAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCAc                                                                                                                                 <  2:3417322/150‑1 (MQ=255)

                  aGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACt                                                                                                                                >  2:2424484/1‑150 (MQ=255)

                      cGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGAc                                                                                                                            >  2:2533706/1‑150 (MQ=255)

                       gCCGAAATGCGAGCTCGAGTAAAAAACTTCAATACACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGAcc                                                                                                                           <  2:3321373/150‑1 (MQ=255)

                       gCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGAcc                                                                                                                           >  2:2971308/1‑150 (MQ=255)

                             aTGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATg                                                                                                                     >  2:263924/1‑150 (MQ=255)

                              agCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAGGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGt                                                                                                                    >  2:351981/2‑150 (MQ=255)

                                cGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTa                                                                                                                  >  2:679706/1‑150 (MQ=255)

                                cGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTa                                                                                                                  >  2:2381649/1‑150 (MQ=255)

                                 gAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAg                                                                                                                 <  1:1222953/150‑1 (MQ=255)

                                    cTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCa                                                                                                              >  1:2295331/1‑150 (MQ=255)

                                    cTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCa                                                                                                              >  1:1302001/1‑150 (MQ=255)

                                     tCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCAt                                                                                                             >  1:1117806/1‑150 (MQ=255)

                                      cGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATg                                                                                                            >  2:3054349/1‑150 (MQ=255)

                                        aGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCa                                                                                                              <  1:1515864/146‑1 (MQ=255)

                                        aGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGc                                                                                                          >  2:1043891/1‑150 (MQ=255)

                                        aGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGc                                                                                                          >  1:1247727/1‑150 (MQ=255)

                                           aaaaaaCTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTaa                                                                                                       >  1:2774900/1‑150 (MQ=255)

                                             aaaaCTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATc                                                                                                     >  2:148905/1‑150 (MQ=255)

                                                aCTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTg                                                                                                  <  2:1963488/150‑1 (MQ=255)

                                                   tCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTATTCATGGCTCATATTGttt                                                                                               >  1:2343242/1‑150 (MQ=255)

                                                    cAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTg                                                                                              >  2:1948733/1‑150 (MQ=255)

                                                      aTAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCa                                                                                            >  2:3093719/1‑150 (MQ=255)

                                                       tAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCAt                                                                                           <  1:1017287/150‑1 (MQ=255)

                                                         aaCTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCa                                                                                         >  2:2645968/1‑150 (MQ=255)

                                                         aaCTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCa                                                                                         <  2:307381/150‑1 (MQ=255)

                                                           ctctTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAac                                                                                       <  1:296290/150‑1 (MQ=255)

                                                           ctctTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAac                                                                                       <  2:3739301/150‑1 (MQ=255)

                                                               ttGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAacacac                                                                                   <  1:3125876/150‑1 (MQ=255)

                                                                 gaagaaTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCg                                                                                 >  1:3529994/1‑150 (MQ=255)

                                                                 gaagaaTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCg                                                                                 >  2:1368834/1‑150 (MQ=255)

                                                                 gaagaaTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCg                                                                                 <  2:589240/150‑1 (MQ=255)

                                                                   agaaTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCa                                                                               >  1:1737598/1‑150 (MQ=255)

                                                                   agaaTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCa                                                                               >  2:2190703/1‑150 (MQ=255)

                                                                     aaTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACg                                                                             >  2:1182525/1‑150 (MQ=255)

                                                                       ttACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGgt                                                                           >  2:2339178/1‑150 (MQ=255)

                                                                          cTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGtt                                                                        >  2:2863064/1‑150 (MQ=255)

                                                                           tAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtc                                                                       >  1:1957907/1‑150 (MQ=255)

                                                                            aaaaGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtct                                                                      >  1:1934866/1‑150 (MQ=255)

                                                                               aGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAg                                                                   >  2:1102496/1‑150 (MQ=255)

                                                                               aGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAg                                                                   >  1:2655660/1‑150 (MQ=255)

                                                                                   cGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCaaa                                                               <  1:967336/150‑1 (MQ=255)

                                                                                   cGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCaaa                                                               <  2:791095/150‑1 (MQ=255)

                                                                                    gTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAAc                                                              >  1:1677606/1‑150 (MQ=255)

                                                                                    gTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAAc                                                              >  1:1401689/1‑150 (MQ=255)

                                                                                     tCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACa                                                             >  1:1163795/1‑150 (MQ=255)

                                                                                       aGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGt                                                           >  2:3672099/1‑150 (MQ=255)

                                                                                         cGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTc                                                         <  2:413227/150‑1 (MQ=255)

                                                                                          ggACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTcc                                                        <  1:3222080/150‑1 (MQ=255)

                                                                                          ggACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTcc                                                        <  1:1323106/150‑1 (MQ=255)

                                                                                          ggACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTcc                                                        >  1:3137297/1‑150 (MQ=255)

                                                                                           gACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCg                                                       <  2:503842/150‑1 (MQ=255)

                                                                                             cAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCt                                                     <  1:189745/150‑1 (MQ=255)

                                                                                              aaaTAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTa                                                    <  2:1833794/150‑1 (MQ=255)

                                                                                                 tAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTCTGTTATCTATATCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAccc                                                 >  1:514569/1‑150 (MQ=255)

                                                                                                  aaaaGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATATCATACAAAATCACTTAACCGATATGTTAGTCATGACTAAACTTGATTGCAACAACACACCGCACGGAGTTCTCAGCAAACAGTACCGCTCcccc                                                >  1:2131158/1‑150 (MQ=255)

                                                                                                  aaaaGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAcccc                                                <  2:2452099/150‑1 (MQ=255)

                                                                                                  aaaaGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAcccc                                                >  1:3155350/1‑150 (MQ=255)

                                                                                                   aaaGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCa                                               >  1:3518539/1‑150 (MQ=255)

                                                                                                       aTAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGt                                           >  2:1557016/1‑150 (MQ=255)

                                                                                                         aaCATCATCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTa                                         >  2:912256/1‑150 (MQ=255)

                                                                                                           catcatCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAg                                       <  2:2775505/150‑1 (MQ=255)

                                                                                                           catcatCAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAg                                       <  1:886089/150‑1 (MQ=255)

                                                                                                            atcatcAATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAgg                                      <  2:1869770/150‑1 (MQ=255)

                                                                                                               atcaATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGa                                   <  2:2751611/150‑1 (MQ=255)

                                                                                                                tcaATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGaa                                  <  1:3054349/150‑1 (MQ=255)

                                                                                                                 caATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGaaa                                 >  2:2090284/1‑150 (MQ=255)

                                                                                                                 caATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGaaa                                 >  2:1896868/1‑150 (MQ=255)

                                                                                                                 caATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGaaa                                 >  2:2090999/1‑150 (MQ=255)

                                                                                                                 caATGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGaaa                                 >  1:752081/1‑150 (MQ=255)

                                                                                                                   aTGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATg                               >  2:1468624/1‑150 (MQ=255)

                                                                                                                    tGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGa                              <  1:2810745/150‑1 (MQ=255)

                                                                                                                    tGAGTTATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGa                              >  1:2703481/1‑150 (MQ=255)

                                                                                                                     gAGTTATCTTTTACCACCTCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAg                             <  2:43819/150‑1 (MQ=255)

                                                                                                                        ttATCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTc                          >  2:2828846/1‑150 (MQ=255)

                                                                                                                          aTCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAg                        >  1:760664/1‑150 (MQ=255)

                                                                                                                           tCTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGc                       >  1:3753177/1‑150 (MQ=255)

                                                                                                                            cTTTTACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCa                      >  1:335206/1‑150 (MQ=255)

                                                                                                                             ttttACCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCAt                     <  1:1091361/150‑1 (MQ=255)

                                                                                                                                 aCCACATCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGAt                 <  1:3713116/150‑1 (MQ=255)

                                                                                                                                   cacaTCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATAc               >  2:1255313/1‑150 (MQ=255)

                                                                                                                                    acaTCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACt              <  2:3221517/150‑1 (MQ=255)

                                                                                                                                    acaTCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACt              <  1:2424484/150‑1 (MQ=255)

                                                                                                                                     caTCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTa             >  1:1593950/1‑150 (MQ=255)

                                                                                                                                       tCAATTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATc           <  1:2490044/150‑1 (MQ=255)

                                                                                                                                          aTTATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGAt        >  1:2395821/1‑150 (MQ=255)

                                                                                                                                            tATGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCt      <  1:2190703/150‑1 (MQ=255)

                                                                                                                                             aTGTTATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGACATGAGGTCAGCATGGATACTATCGATCtt     >  2:1134112/1‑150 (MQ=255)

                                                                                                                                                ttATCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGc  <  1:679706/150‑1 (MQ=255)

AATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGC  >  CP009273/1642492‑1642785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`