Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 1,683,582 C→A F250L (TTC→TTA)  manA → mannose‑6‑phosphate isomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,683,5820CA100.0% 628.8 / NA 192F250L (TTC→TTA) manAmannose‑6‑phosphate isomerase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (89/103);  total (89/103)

Only 100 of 192 total aligned reads displayed.

TTTAAAATCGGCCCTCGATAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTCGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGCCAAACCGGCTA  >  CP009273/1683435‑1683727
                                                                                                                                                   |                                                                                                                                                 
 ttAAAATCGGCCCTCGATAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCt                                                                                                                                                >  2:1210353/1‑150 (MQ=255)
   aaaaTCGGCCCTCGATAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGa                                                                                                                                              >  2:3652831/1‑150 (MQ=255)
    aaaTCGGCCCTCGATAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGATGAATGTGGTGAAATTGAAACCTGGCGAAGCGATGTTCCTGTTAGCTGaa                                                                                                                                             >  2:1817497/1‑150 (MQ=255)
     aaTCGGCCCTCGATAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGaaa                                                                                                                                            >  1:881389/1‑150 (MQ=255)
         ggCCCTCGATAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACAcc                                                                                                                                        <  2:3484676/150‑1 (MQ=255)
          gCCCTCGATAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCg                                                                                                                                       <  1:1905089/150‑1 (MQ=255)
             cTCGATAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCAc                                                                                                                                    <  1:872860/150‑1 (MQ=255)
              tCGAGAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACg                                                                                                                                   <  2:3222385/150‑1 (MQ=255)
                gATAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCt                                                                                                                                 <  1:2388073/150‑1 (MQ=255)
                 aTAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCtt                                                                                                                                >  2:3216317/1‑150 (MQ=255)
                      cagcagGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTg                                                                                                                           >  1:3416283/1‑150 (MQ=255)
                         cagGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCaa                                                                                                                        <  2:113186/150‑1 (MQ=255)
                          agGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAg                                                                                                                       >  1:2026725/1‑150 (MQ=255)
                            ggTGAACCGTGGCAAACGATTCGTTTAATTTCTGTATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGc                                                                                                                     <  2:1270854/150‑1 (MQ=255)
                            ggTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGc                                                                                                                     <  2:3775877/150‑1 (MQ=255)
                             gTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCg                                                                                                                    >  2:1809259/1‑150 (MQ=255)
                               gAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTg                                                                                                                  <  1:3805001/150‑1 (MQ=255)
                               gAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTg                                                                                                                  <  1:3749558/150‑1 (MQ=255)
                               gAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTg                                                                                                                  <  1:294923/150‑1 (MQ=255)
                               gAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTg                                                                                                                  <  1:2491352/150‑1 (MQ=255)
                                   cGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGgcgc                                                                                                              >  1:3117825/1‑150 (MQ=255)
                                   cGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGgcgc                                                                                                              >  2:636360/1‑150 (MQ=255)
                                   cGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGgcgc                                                                                                              >  1:1216887/1‑150 (MQ=255)
                                    gTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCt                                                                                                             <  1:1647247/150‑1 (MQ=255)
                                       gCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGa                                                                                                          <  2:1026415/150‑1 (MQ=255)
                                       gCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGa                                                                                                          >  1:3644193/1‑150 (MQ=255)
                                        cAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGaa                                                                                                         >  1:3374995/1‑150 (MQ=255)
                                           aCGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTg                                                                                                      >  1:2000425/1‑150 (MQ=255)
                                            cGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGa                                                                                                     >  2:1206449/1‑150 (MQ=255)
                                             gATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGAt                                                                                                    >  2:1939892/1‑150 (MQ=255)
                                             gATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGAt                                                                                                    >  2:2186360/1‑150 (MQ=255)
                                             gATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGAt                                                                                                    >  2:906430/1‑150 (MQ=255)
                                                 cGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCa                                                                                                >  1:3180924/1‑150 (MQ=255)
                                                       aTTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTcc                                                                                          >  1:616808/1‑150 (MQ=255)
                                                       aTTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGAGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTcc                                                                                          >  1:298815/1‑150 (MQ=255)
                                                          tCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGAt                                                                                       >  2:2598239/1‑150 (MQ=255)
                                                          tCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGAt                                                                                       <  2:760033/150‑1 (MQ=255)
                                                             gAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAAc                                                                                    <  2:3725536/150‑1 (MQ=255)
                                                             gAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAAc                                                                                    <  2:2722784/150‑1 (MQ=255)
                                                              aaTTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACg                                                                                   <  1:3395964/150‑1 (MQ=255)
                                                                  ttACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGtgct                                                                               <  2:1739913/150‑1 (MQ=255)
                                                                  ttACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGtgct                                                                               <  1:2226146/150‑1 (MQ=255)
                                                                   tACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGtgctg                                                                              >  2:239323/1‑150 (MQ=255)
                                                                   tACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGtgctg                                                                              >  2:2148660/1‑150 (MQ=255)
                                                                   tACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGtgctg                                                                              <  1:2060932/150‑1 (MQ=255)
                                                                       cGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCtgcgtg                                                                          >  1:401844/1‑150 (MQ=255)
                                                                        ggAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCtgcgtgc                                                                         >  2:2536458/1‑150 (MQ=255)
                                                                        ggAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCtgcgtgc                                                                         <  2:3117825/150‑1 (MQ=255)
                                                                        ggAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCtgcgtgc                                                                         >  1:277061/1‑150 (MQ=255)
                                                                          aaGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCgg                                                                       >  1:1540836/1‑150 (MQ=255)
                                                                           aGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCggg                                                                      <  2:59409/150‑1 (MQ=255)
                                                                            gACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGt                                                                     <  1:3772016/150‑1 (MQ=255)
                                                                             aCAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTc                                                                    <  1:1136601/150‑1 (MQ=255)
                                                                              cAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCt                                                                   <  1:1041272/150‑1 (MQ=255)
                                                                               aGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTg                                                                  <  2:2716661/150‑1 (MQ=255)
                                                                                gCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGa                                                                 <  2:2026725/150‑1 (MQ=255)
                                                                                    tCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGcc                                                             <  1:3799647/150‑1 (MQ=255)
                                                                                     cTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCt                                                            >  1:578809/1‑150 (MQ=255)
                                                                                      tGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTa                                                           >  2:1444254/1‑150 (MQ=255)
                                                                                      tGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTa                                                           <  1:3665147/150‑1 (MQ=255)
                                                                                      tGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTa                                                           >  2:1247013/1‑150 (MQ=255)
                                                                                        ttCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTaaa                                                         <  2:444923/150‑1 (MQ=255)
                                                                                         tctcCCCGCTATTGCTGAATGTGGTGAATTTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAAt                                                        <  2:3131885/150‑1 (MQ=255)
                                                                                         tctcCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTGAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAAt                                                        <  2:3131769/150‑1 (MQ=255)
                                                                                         tctcCCCGCTATTGCTGAATGTGGTGAAATTAAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAAt                                                        >  2:3089414/1‑150 (MQ=255)
                                                                                          ctcCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATa                                                       <  2:2282776/150‑1 (MQ=255)
                                                                                          ctcCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATa                                                       >  1:974236/1‑150 (MQ=255)
                                                                                           tcCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATAc                                                      >  1:3652187/1‑150 (MQ=255)
                                                                                            ccccGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACa                                                     >  2:2948679/1‑150 (MQ=255)
                                                                                             cccGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACAt                                                    >  2:1651939/1‑150 (MQ=255)
                                                                                              ccGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACAtt                                                   <  2:2022269/150‑1 (MQ=255)
                                                                                               cGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTg                                                  <  1:2081218/150‑1 (MQ=255)
                                                                                                gCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGa                                                 >  2:1885518/1‑150 (MQ=255)
                                                                                                  tATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGata                                               >  2:3578022/1‑150 (MQ=255)
                                                                                                   agtGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGatat                                              <  1:3542649/148‑1 (MQ=255)
                                                                                                       cTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCg                                          <  1:3042373/150‑1 (MQ=255)
                                                                                                            tgtgGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACt                                     <  1:3642191/150‑1 (MQ=255)
                                                                                                            tgtgGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACt                                     <  1:3484908/150‑1 (MQ=255)
                                                                                                                 tgAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTg                                >  2:2993106/1‑150 (MQ=255)
                                                                                                                 tgAAATTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTg                                <  1:2212340/150‑1 (MQ=255)
                                                                                                                   aaaTTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGcc                              <  1:2282558/150‑1 (MQ=255)
                                                                                                                     aTTGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCaa                            >  2:1117100/1‑150 (MQ=255)
                                                                                                                       tGAACCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAAtg                          <  2:131774/150‑1 (MQ=255)
                                                                                                                         aaCCCTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAAtgtg                        <  1:2286264/150‑1 (MQ=255)
                                                                                                                           cccTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGaa                      <  1:1809338/150‑1 (MQ=255)
                                                                                                                             cTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGACCTGGTTGCCAATGTGAAAt                    >  2:2586442/1‑150 (MQ=255)
                                                                                                                             cTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAAt                    <  2:2295991/150‑1 (MQ=255)
                                                                                                                             cTGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAAt                    >  2:2045902/1‑150 (MQ=255)
                                                                                                                              tGGCGAAGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAAtt                   >  2:2200774/1‑150 (MQ=255)
                                                                                                                                    aGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGc             <  1:1787703/150‑1 (MQ=255)
                                                                                                                                    aGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGc             >  1:166541/1‑150 (MQ=255)
                                                                                                                                    aGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGc             >  2:2109559/1‑150 (MQ=255)
                                                                                                                                    aGCGATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGc             >  2:2109684/1‑150 (MQ=255)
                                                                                                                                       gATGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGCCaa          >  1:1747476/1‑150 (MQ=255)
                                                                                                                                        aTGTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGCCaaa         >  1:1336634/1‑150 (MQ=255)
                                                                                                                                          gTTCCTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGCCAAAcc       <  2:1692443/150‑1 (MQ=255)
                                                                                                                                              cTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGCCAAACCGGCt   <  2:3374995/150‑1 (MQ=255)
                                                                                                                                              cTGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGCCAAACCGGCt   >  2:2008228/1‑150 (MQ=255)
                                                                                                                                               tGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGCCAAACCGGCTa  >  1:1953852/1‑150 (MQ=255)
                                                                                                                                               tGTTAGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGCCAAACCGGCTa  <  2:3041350/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
TTTAAAATCGGCCCTCGATAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTCGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGCCAAACCGGCTA  >  CP009273/1683435‑1683727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑