| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 1,687,003 | T→A | R36* (AGA→TGA) | uidC ← | putative outer membrane porin for beta‑glucuronides porin protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,687,003 | 0 | T | A | 99.6% | 824.0 / NA | 248 | R36* (AGA→TGA) | uidC | putative outer membrane porin for beta‑glucuronides porin protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (124/123); minor base C (1/0); total (125/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 250 total aligned reads displayed.
AAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGATTATTTTTATTGAATATTA > CP009273/1686856‑1687149 | aaaCATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGa > 1:1043013/1‑150 (MQ=255)aaaCATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTACCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGa > 2:2230315/1‑150 (MQ=255) aCATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATg < 1:2743211/150‑1 (MQ=255) cATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGc > 1:2141466/1‑150 (MQ=255) cATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGc > 2:178815/1‑150 (MQ=255) ataataCGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCg > 2:2552079/1‑150 (MQ=255) taataCGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGt > 1:3074468/1‑150 (MQ=255) gCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTccc > 1:3758751/1‑150 (MQ=255) cccGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGc > 1:2692643/1‑150 (MQ=255) ccGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCt < 1:3250727/150‑1 (MQ=255) cGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCtt > 2:1637540/1‑150 (MQ=255) ccTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCACTTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCa > 2:878679/1‑150 (MQ=255) ccTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCa > 1:1871724/1‑150 (MQ=255) cTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCAt > 1:1413818/1‑150 (MQ=255) cTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCAt < 2:1649427/150‑1 (MQ=255) ttCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATc > 2:2039784/1‑150 (MQ=255) aaCGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTc > 2:1070817/1‑150 (MQ=255) aaCGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTc > 1:2548505/1‑150 (MQ=255) aaCGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTc > 2:2594000/1‑150 (MQ=255) cGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAg > 2:151281/1‑150 (MQ=255) ataataTTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGt < 1:2375381/150‑1 (MQ=255) aataTTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTg > 1:3520020/1‑150 (MQ=255) atatTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgc > 2:2368425/1‑150 (MQ=255) tatTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgcg < 1:1443467/150‑1 (MQ=255) taatGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgcg < 2:1429142/147‑1 (MQ=255) atTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTgcgc > 1:390970/1‑150 (MQ=255) ggAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGcgccgc > 2:922529/1‑150 (MQ=255) ataataACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATa > 2:1462916/1‑150 (MQ=255) taaCCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCa < 1:2051702/150‑1 (MQ=255) aCCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCaga < 1:2584506/150‑1 (MQ=255) aCCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCaga > 2:767895/1‑150 (MQ=255) aCCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCaga > 1:3327926/1‑150 (MQ=255) aCCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCaga < 1:3224163/150‑1 (MQ=255) ccACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCagag < 1:2504257/150‑1 (MQ=255) cACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCGGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAgg > 1:3613635/1‑150 (MQ=255) aCTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGt > 2:937402/1‑150 (MQ=255) tATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTaa > 2:1368993/1‑150 (MQ=255) gAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGcc > 1:1205572/1‑150 (MQ=255) gAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGcc < 1:1497136/150‑1 (MQ=255) aTCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCaga < 2:2767869/150‑1 (MQ=255) tCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCagag > 1:2233468/1‑150 (MQ=255) aGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCa > 2:2094337/1‑150 (MQ=255) gCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAg < 2:3770715/150‑1 (MQ=255) gCAATCCTCCCTGGACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAg < 2:579084/150‑1 (MQ=255) cAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGc > 2:3348993/1‑150 (MQ=255) aaTCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGcc < 2:2984654/150‑1 (MQ=255) ctccCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCa > 2:2190218/1‑150 (MQ=255) ctccCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCa > 2:1287410/1‑150 (MQ=255) ctccCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCa < 1:2594000/150‑1 (MQ=255) ctccCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCATCa < 2:680827/150‑1 (MQ=255) cTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCa < 2:2744647/150‑1 (MQ=255) cTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCa < 2:805996/150‑1 (MQ=255) gCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGcc < 2:3123998/150‑1 (MQ=255) gTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCAt > 1:2805995/1‑150 (MQ=255) aaaTATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATgg > 1:3169890/1‑150 (MQ=255) tctcTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACt < 2:380281/150‑1 (MQ=255) tcgtCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTAt < 1:98725/147‑1 (MQ=255) ctTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTAtt < 1:151400/150‑1 (MQ=255) ttCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTAttt > 1:1696372/1‑150 (MQ=255) tCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTAtttt > 1:2761388/1‑150 (MQ=255) tCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTAtttt > 2:626323/1‑150 (MQ=255) cccGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTAttttt > 1:280013/1‑150 (MQ=255) cgcCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCa < 1:2392769/150‑1 (MQ=255) ccAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATa < 1:178815/150‑1 (MQ=255) ccAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATa < 1:178061/150‑1 (MQ=255) cAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAg < 2:2141466/150‑1 (MQ=255) aGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGt > 2:2586775/1‑150 (MQ=255) aGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGt > 1:769658/1‑150 (MQ=255) aGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGt < 2:211123/150‑1 (MQ=255) gCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGtt > 2:504288/1‑150 (MQ=255) gCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGtt < 1:1880295/150‑1 (MQ=255) gCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGtt < 1:885614/150‑1 (MQ=255) gCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGtt > 2:1192458/1‑150 (MQ=255) cACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTg < 2:1483740/150‑1 (MQ=255) aCTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGc > 1:514570/1‑150 (MQ=255) cTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCATTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCATCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCa < 1:1563669/150‑1 (MQ=255) cTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCa < 1:2747407/150‑1 (MQ=255) gCTTATCCGCCCTGCGCACTGCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCtt < 2:3135229/150‑1 (MQ=255) cTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGTCTGTTGCGCAGCATAAGCAGAGGTAAGGCCAGAGGCAGACTTAAGGAAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCttt < 1:2230315/150‑1 (MQ=255) cTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCttt < 1:2954404/150‑1 (MQ=255) cTTATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCttt < 1:1651086/150‑1 (MQ=255) tATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGa > 2:1602160/1‑150 (MQ=255) tATCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGa < 2:3624732/150‑1 (MQ=255) aTCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGAt < 2:1939160/150‑1 (MQ=255) aTCCGCCCTGCGCAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGAt > 2:2886686/1‑150 (MQ=255) gcgcAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCGGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGatt < 2:1765161/150‑1 (MQ=255) gcgcAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGatt < 2:1843817/150‑1 (MQ=255) cgcAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGatta > 2:726940/1‑150 (MQ=255) gcAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGattat < 1:1843156/150‑1 (MQ=255) gcAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGattat > 1:2928564/1‑150 (MQ=255) cAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGattatt < 2:3737446/150‑1 (MQ=255) cAATTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGGTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGattatt < 1:667570/150‑1 (MQ=255) aTTCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGATTAtttt < 2:2623033/150‑1 (MQ=255) ttCGTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGATTAttttt > 2:339966/1‑150 (MQ=255) gTTTTTCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGATTATTTTTAtt > 2:3021651/1‑150 (MQ=255) tttttCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGATTATTTTTATTg < 2:3557170/150‑1 (MQ=255) ttttCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGATTATTTTTATTGa < 2:2944238/150‑1 (MQ=255) tttCAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGATTATTTTTATTGaa < 2:3520020/150‑1 (MQ=255) cAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGATTATTTTTATTGAatat < 2:3278407/150‑1 (MQ=255) cAGTCAGATGCGTAGTCCCGCTTCATCGTCAGCCAGGTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATACCGGCCATGGCCACTAATTTTCTCATAGTTGCACCTTTGATGTTCTGATTATTTTTATTGAatat < 2:3278493/150‑1 (MQ=255) | AAACATAATACGCCCCGCCTTCAACGCCAATAATATTGGAATAATAACCACTATTGAAATCGAGCAATCCTCCCTGTACCCATGCGTAAATATCTCTTCCCGCGCCAGCACTGGGCTTATCCGCCCTGCGCAATTCGTTTTTCAGTCTGATGCGTAGTCCCGCTTCATCGTCAGCCAGTTGCGCCGCATAAGCAGAGGTAAGGCCAGAGGCAGCCGTCAGGCAAATAACGGCCATGGCCACTATTTTTCTCATAGTTGCACCTTTGATGTTCTGATTATTTTTATTGAATATTA > CP009273/1686856‑1687149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |