| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 1,720,180 | C→A | intergenic (‑3/‑100) | ydhL ← / → nemR | DUF1289 family protein/transcriptional repressor for the nemRA‑gloA operon, quinone‑, glyoxal‑, and HOCl‑activated |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,720,180 | 0 | C | A | 99.6% | 806.5 / NA | 242 | intergenic (‑3/‑100) | ydhL/nemR | DUF1289 family protein/transcriptional repressor for the nemRA‑gloA operon, quinone‑, glyoxal‑, and HOCl‑activated |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (110/131); minor base T (0/1); total (110/132) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 242 total aligned reads displayed.
CTTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGA > CP009273/1720033‑1720325 | ctTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGc > 2:658295/1‑150 (MQ=255) gTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCcct < 2:1379360/150‑1 (MQ=255) tttttCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCcctc < 2:1746626/150‑1 (MQ=255) tttttCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCcctc < 1:2159187/150‑1 (MQ=255) ttttCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCcctcc > 2:3187790/1‑150 (MQ=255) cGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAg < 1:2524803/150‑1 (MQ=255) ccATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGAt > 2:487514/1‑150 (MQ=255) cATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATa > 1:2807789/1‑150 (MQ=255) aTCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATaa > 2:3512988/1‑150 (MQ=255) aTCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATaa > 1:2682539/1‑150 (MQ=255) tCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAg < 1:3343682/150‑1 (MQ=255) gCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGag > 2:3567269/1‑149 (MQ=255) cTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGatt < 1:10075/150‑1 (MQ=255) tCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGatta < 2:514265/150‑1 (MQ=255) cATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGattat > 2:295511/1‑150 (MQ=255) aTTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGattatt < 1:2823082/150‑1 (MQ=255) ttttATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGAttatta > 2:334191/1‑150 (MQ=255) ttttATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGAttatta > 2:1988242/1‑150 (MQ=255) tttATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTAc < 2:1659986/150‑1 (MQ=255) tATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCa > 2:3696530/1‑150 (MQ=255) tATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCa < 1:2194765/150‑1 (MQ=255) aTTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCat < 2:1608900/150‑1 (MQ=255) ttCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCatt < 1:84742/150‑1 (MQ=255) aGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTg > 1:3670738/1‑150 (MQ=255) ttAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGaa < 2:2516152/150‑1 (MQ=255) aaaaCGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGc > 1:1902688/1‑150 (MQ=255) aaCGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTg < 2:419588/150‑1 (MQ=255) aCGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGt < 2:2628840/150‑1 (MQ=255) gCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTa < 2:1777120/150‑1 (MQ=255) cTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTaa < 1:1653968/150‑1 (MQ=255) catcaCGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATg < 2:1286878/150‑1 (MQ=255) atcaCGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAAGTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGt < 1:294411/150‑1 (MQ=255) tcaCGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTc > 1:3116413/1‑150 (MQ=255) cGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCaa > 2:462962/1‑150 (MQ=255) cTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTATTTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGt < 1:3634762/150‑1 (MQ=255) tACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTa < 2:3029545/150‑1 (MQ=255) tACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTa < 2:2346962/150‑1 (MQ=255) tACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTa < 2:1238308/150‑1 (MQ=255) aCGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAg < 2:2214354/150‑1 (MQ=255) aCGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAg < 2:1204426/150‑1 (MQ=255) cGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGc < 1:3019973/150‑1 (MQ=255) gAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCa < 2:73139/150‑1 (MQ=255) gAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCa < 2:1516183/150‑1 (MQ=255) gAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCa > 2:1066354/1‑150 (MQ=255) gAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCa < 2:2855156/150‑1 (MQ=255) aaaaCAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCaa > 1:1343137/1‑150 (MQ=255) aGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTttg > 2:3745221/1‑150 (MQ=255) aGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTttg > 1:1774433/1‑150 (MQ=255) cgcgACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTttgctt < 2:2923274/150‑1 (MQ=255) cgcgACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTttgctt < 2:3130109/150‑1 (MQ=255) cgcgACAAAACCCGCGTTCGTCAGACTGGCAAAGTCCCCGGCACGGGCTCTGGACAGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCACAGTAGCAACTttgctt < 2:1141491/150‑1 (MQ=255) aaaaCCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTa < 1:574480/150‑1 (MQ=255) aCCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGAc > 2:1721281/1‑150 (MQ=255) cccGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGAcc < 2:1808870/150‑1 (MQ=255) cccGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGAcc > 1:462879/1‑150 (MQ=255) cccGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGAcc < 1:807192/150‑1 (MQ=255) ggCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACt < 2:1895593/150‑1 (MQ=255) gCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTc < 1:3750544/150‑1 (MQ=255) aTTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAAc < 2:3677119/150‑1 (MQ=255) aTTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAAc < 2:87022/150‑1 (MQ=255) cccGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCAt > 1:988126/1‑150 (MQ=255) ccGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATg > 1:1549039/1‑150 (MQ=255) cGGGCTCTGGACGGGAAAGAACTCTAAGTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGaacaaa < 1:3382177/150‑1 (MQ=255) gggCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGaacaaac > 2:2551364/1‑150 (MQ=255) gggCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGaacaaac > 2:313847/1‑150 (MQ=255) gggCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGaacaaac > 2:2440604/1‑150 (MQ=255) gggCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGaacaaac > 2:2352152/1‑150 (MQ=255) gCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAacac > 1:1705648/1‑150 (MQ=255) ctctGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAacaca > 1:2348793/1‑150 (MQ=255) ctctGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAacaca < 1:2564418/150‑1 (MQ=255) tGGACGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACNg < 1:2960099/150‑1 (MQ=255) aCGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAAc < 2:930109/150‑1 (MQ=255) aCGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAAc > 1:229172/1‑150 (MQ=255) cGGGAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACa > 2:2083299/1‑150 (MQ=255) gAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGa < 2:2334263/150‑1 (MQ=255) gAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGa > 2:2161309/1‑150 (MQ=255) gAAAGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGa > 2:565409/1‑150 (MQ=255) aaaGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGAt < 2:2053178/150‑1 (MQ=255) aaGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATa < 1:1066354/150‑1 (MQ=255) aGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATAc < 1:2576770/150‑1 (MQ=255) aGAACTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATAc > 1:480479/1‑150 (MQ=255) aaCTCTAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTc > 2:2820843/1‑150 (MQ=255) ctAATTGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGa > 1:3333468/1‑150 (MQ=255) atAATTGCTCCGCCACTTAGACCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTATACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGa < 2:1359826/149‑1 (MQ=255) ttGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACAt > 1:3459172/1‑150 (MQ=255) tGCTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACAtc < 1:885473/150‑1 (MQ=255) cTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTCGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACAtctc > 1:2724110/1‑150 (MQ=255) cTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACAtctc < 2:2375557/150‑1 (MQ=255) cTCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACAtctc > 1:2489356/1‑150 (MQ=255) tCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTcc < 1:3696530/150‑1 (MQ=255) tCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTcc > 1:2327195/1‑150 (MQ=255) tCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTcc < 1:1852784/150‑1 (MQ=255) tCCGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTcc > 2:476450/1‑150 (MQ=255) cGCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTg < 2:2682539/150‑1 (MQ=255) gCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTgg > 2:2383790/1‑150 (MQ=255) gCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTgg > 2:3107321/1‑150 (MQ=255) gCCACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTgg < 1:1129983/150‑1 (MQ=255) cACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCg > 2:3214605/1‑150 (MQ=255) cACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCg > 2:1763752/1‑150 (MQ=255) cACTTAGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCg < 1:1988242/150‑1 (MQ=255) | CTTGTTTTTCGCCATCGCTCATTTTATTCCAGTTAAAACGCTCATCACGACTACGAAAACAGCCGCGACAAAACCCGCGTTCGTCAGACTGGCAAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGA > CP009273/1720033‑1720325 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |