Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 2,015,913 G→T T188T (ACG→ACT)  fliP → flagellar biosynthesis protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,015,9130GT100.0% 897.9 / NA 266T188T (ACG→ACT) fliPflagellar biosynthesis protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (118/148);  total (118/148)

Only 100 of 266 total aligned reads displayed.

GCGTCAGACCCGTGAGGCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACGATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAATTGCTGGTCGG  >  CP009273/2015766‑2016059
                                                                                                                                                   |                                                                                                                                                  
gcGTCAGACCCGTGAGGCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTAt                                                                                                                                                  <  1:2952834/150‑1 (MQ=255)
   tCAGACCCGTGAGGCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTAtttt                                                                                                                                               <  1:2757741/150‑1 (MQ=255)
    cAGACCCGTGAGGCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTc                                                                                                                                              >  1:2978429/1‑150 (MQ=255)
       aCCCGTGAGGCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATc                                                                                                                                           >  2:2088921/1‑150 (MQ=255)
         ccGTGAGGCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCAATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATccc                                                                                                                                         >  2:729550/1‑150 (MQ=255)
           gTGAGGCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCtt                                                                                                                                       <  2:1385972/150‑1 (MQ=255)
            tGAGGCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCttt                                                                                                                                      <  1:2677309/150‑1 (MQ=255)
              aGGCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCttttt                                                                                                                                    <  1:1569959/150‑1 (MQ=255)
              aGGCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCttttt                                                                                                                                    <  1:2107634/150‑1 (MQ=255)
               ggCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCtttttt                                                                                                                                   <  1:613361/150‑1 (MQ=255)
                 cAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGa                                                                                                                                 <  1:1645456/150‑1 (MQ=255)
                  aGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGAt                                                                                                                                <  1:545060/150‑1 (MQ=255)
                  aGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGAt                                                                                                                                <  2:1228691/150‑1 (MQ=255)
                    aTTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTa                                                                                                                              <  2:3008554/150‑1 (MQ=255)
                       tAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCg                                                                                                                           >  1:3388367/1‑150 (MQ=255)
                       tAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCg                                                                                                                           >  1:3388806/1‑150 (MQ=255)
                        aGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGATGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGa                                                                                                                          <  2:970117/150‑1 (MQ=255)
                         gggTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGAc                                                                                                                         <  2:2846281/150‑1 (MQ=255)
                           gttgttTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCt                                                                                                                       <  2:1079513/150‑1 (MQ=255)
                           gttgttTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTGTGAATATCGACCt                                                                                                                       >  2:3128304/1‑150 (MQ=255)
                              gttTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGt                                                                                                                    >  2:2759136/1‑150 (MQ=255)
                              gttTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGt                                                                                                                    <  1:262010/150‑1 (MQ=255)
                              gttTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGt                                                                                                                    <  2:518025/150‑1 (MQ=255)
                                 tGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGAt                                                                                                                 <  2:2383246/150‑1 (MQ=255)
                                 tGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGAt                                                                                                                 <  2:477303/150‑1 (MQ=255)
                                 tGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGAt                                                                                                                 >  2:299268/1‑150 (MQ=255)
                                   ccAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAg                                                                                                               <  2:1092113/150‑1 (MQ=255)
                                    cAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGc                                                                                                              >  1:1746716/1‑150 (MQ=255)
                                     aGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGcc                                                                                                             <  1:3564590/150‑1 (MQ=255)
                                      gACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCa                                                                                                            <  2:1278902/150‑1 (MQ=255)
                                      gACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCa                                                                                                            <  1:2093719/150‑1 (MQ=255)
                                      gACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCa                                                                                                            <  2:236014/150‑1 (MQ=255)
                                             gAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGtt                                                                                                     >  1:1902515/1‑150 (MQ=255)
                                             gAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTGTTTGATTATCGACCTGGTGATAGCCAGCGTGtt                                                                                                     >  2:2124053/1‑150 (MQ=255)
                                              aaTACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTg                                                                                                    >  1:3192298/1‑150 (MQ=255)
                                              aaTACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTg                                                                                                    <  1:445658/150‑1 (MQ=255)
                                               aTACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGa                                                                                                   <  2:3269159/150‑1 (MQ=255)
                                               aTACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGa                                                                                                   >  2:6107/1‑150 (MQ=255)
                                                  ccGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATgg                                                                                                >  1:1257462/1‑150 (MQ=255)
                                                   cGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGc                                                                                               <  2:1208495/150‑1 (MQ=255)
                                                     gCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCAt                                                                                             <  2:1922842/150‑1 (MQ=255)
                                                      cccGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCAtt                                                                                            <  1:2295630/150‑1 (MQ=255)
                                                      cccGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCAtt                                                                                            >  1:2569362/1‑150 (MQ=255)
                                                       ccGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTg                                                                                           <  2:2019797/150‑1 (MQ=255)
                                                        cGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTgg                                                                                          >  2:3088535/1‑150 (MQ=255)
                                                        cGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTgg                                                                                          >  2:3456895/1‑150 (MQ=255)
                                                           tGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGga                                                                                       >  2:2446852/1‑150 (MQ=255)
                                                           tGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGga                                                                                       >  2:2950979/1‑150 (MQ=255)
                                                             cAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGgatg                                                                                     <  2:2564589/150‑1 (MQ=255)
                                                                     tGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGt                                                                             <  1:3797371/150‑1 (MQ=255)
                                                                      gAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGtt                                                                            >  2:3487533/1‑150 (MQ=255)
                                                                      gAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGtt                                                                            >  2:2678628/1‑150 (MQ=255)
                                                                           cGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTccccc                                                                       >  2:922587/1‑150 (MQ=255)
                                                                            gTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCa                                                                      <  2:687107/150‑1 (MQ=255)
                                                                                 gATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGccac                                                                 >  2:1479239/1‑150 (MQ=255)
                                                                                   tGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGccacca                                                               <  1:1465992/150‑1 (MQ=255)
                                                                                    gcgcATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCAt                                                              <  2:1819189/150‑1 (MQ=255)
                                                                                       cATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGc                                                           >  1:1298927/1‑150 (MQ=255)
                                                                                        aTTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGct                                                          <  2:3656256/150‑1 (MQ=255)
                                                                                        aTTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGct                                                          >  1:2469673/1‑150 (MQ=255)
                                                                                         ttttGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGctc                                                         <  2:3568812/150‑1 (MQ=255)
                                                                                          tttGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGctct                                                        <  1:2882543/150‑1 (MQ=255)
                                                                                          tttGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGctct                                                        <  2:173694/150‑1 (MQ=255)
                                                                                           ttGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTg                                                       >  1:2779125/1‑150 (MQ=255)
                                                                                                 ccGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCttt                                                 <  2:1332219/150‑1 (MQ=255)
                                                                                                  cGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTa                                                >  1:1547972/1‑150 (MQ=255)
                                                                                                   ggCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTaa                                               >  1:1975170/1‑150 (MQ=255)
                                                                                                    gCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTaaa                                              >  1:328072/1‑150 (MQ=255)
                                                                                                          gTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATg                                        >  1:3713922/1‑150 (MQ=255)
                                                                                                            gACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCt                                      <  1:2229634/150‑1 (MQ=255)
                                                                                                            gACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCt                                      >  2:848892/1‑150 (MQ=255)
                                                                                                            gACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCt                                      >  1:3646099/1‑150 (MQ=255)
                                                                                                              ccAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGt                                    <  1:3155037/150‑1 (MQ=255)
                                                                                                                aGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGttt                                  <  2:3740170/150‑1 (MQ=255)
                                                                                                                aGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGttt                                  <  1:764363/150‑1 (MQ=255)
                                                                                                                   gAGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTa                               >  1:3100056/1‑150 (MQ=255)
                                                                                                                    aGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTAc                              <  2:1973074/150‑1 (MQ=255)
                                                                                                                    aGTTGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTAc                              >  1:2887456/1‑150 (MQ=255)
                                                                                                                      ttGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACtg                            <  2:3388806/150‑1 (MQ=255)
                                                                                                                      ttGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACtg                            <  2:1162140/150‑1 (MQ=255)
                                                                                                                       tGAAAACCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACtgg                           >  1:2138419/1‑150 (MQ=255)
                                                                                                                         aaaaCCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACtggtg                         <  1:1658582/150‑1 (MQ=255)
                                                                                                                          aaaCCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACtggtgg                        >  2:2488175/1‑150 (MQ=255)
                                                                                                                           aaCCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGa                       >  2:2891181/1‑150 (MQ=255)
                                                                                                                            aCCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGAt                      <  1:1503089/150‑1 (MQ=255)
                                                                                                                            aCCGCATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGAt                      <  1:1694245/150‑1 (MQ=255)
                                                                                                                                cATTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGAtggct                  >  2:863745/1‑150 (MQ=255)
                                                                                                                                 aTTTCAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGAtggctg                 <  1:729550/150‑1 (MQ=255)
                                                                                                                                     cAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCaa             >  1:1355422/1‑150 (MQ=255)
                                                                                                                                     cAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCaa             >  2:3384773/1‑150 (MQ=255)
                                                                                                                                     cAGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCaa             >  1:995523/1‑150 (MQ=255)
                                                                                                                                      aGATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAAt            <  2:399751/150‑1 (MQ=255)
                                                                                                                                       gATAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAAtt           <  2:1691096/150‑1 (MQ=255)
                                                                                                                                        aTAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAATTg          >  1:2938993/1‑150 (MQ=255)
                                                                                                                                        aTAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAATTg          >  2:1587745/1‑150 (MQ=255)
                                                                                                                                        aTAGGCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAATTg          >  2:2172/1‑150 (MQ=255)
                                                                                                                                           ggCTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGCTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAATTGCTg       >  2:1892154/1‑150 (MQ=255)
                                                                                                                                             cTTCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAATTGCTGGt     >  1:112309/1‑150 (MQ=255)
                                                                                                                                               tCACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAATTGCTGGTCg   <  1:1087383/150‑1 (MQ=255)
                                                                                                                                                cACTATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGTGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGATGTTTGTACTGGTGGATGGCTGGCACTTGCTGGTCgg  >  1:847890/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GCGTCAGACCCGTGAGGCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACGATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAATTGCTGGTCGG  >  CP009273/2015766‑2016059

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑