BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	2,122,653	C→T	W160* (TGG→TAG)	wcaE ←	putative glycosyl transferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	2,122,653	0	C	T	100.0%	704.7 / NA	210	W160* (TGG→TAG)	wcaE	putative glycosyl transferase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (119/91); total (119/91)

Only 100 of 210 total aligned reads displayed.

CACAATTCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCCATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGATCATCACGTTA  >  CP009273/2122506‑2122799

cacaATTCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTAt                                                                                                                                                  >  1:2604536/1‑150 (MQ=255)

cacaATTCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTAt                                                                                                                                                  >  1:1934938/1‑150 (MQ=255)

  caATTCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTAttt                                                                                                                                                >  2:1106300/1‑150 (MQ=255)

   aaTTCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTAtttt                                                                                                                                               >  2:69946/1‑150 (MQ=255)

     ttCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTAtttttt                                                                                                                                             <  1:1118060/150‑1 (MQ=255)

     ttCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTAtttttt                                                                                                                                             >  2:660339/1‑150 (MQ=255)

       ccATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCa                                                                                                                                           <  1:3080681/150‑1 (MQ=255)

       ccATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCa                                                                                                                                           >  1:241337/1‑150 (MQ=255)

         atatTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAg                                                                                                                                         >  1:682695/1‑150 (MQ=255)

                 ggtggtAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATAc                                                                                                                                 <  1:2468090/150‑1 (MQ=255)

                  gtggtAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACa                                                                                                                                >  1:1294902/1‑150 (MQ=255)

                       aGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGaa                                                                                                                           >  2:1845945/1‑150 (MQ=255)

                        gATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGaaa                                                                                                                          >  1:197348/1‑150 (MQ=255)

                         aTACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGaaaa                                                                                                                         >  1:606484/1‑150 (MQ=255)

                          tACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGaaaaa                                                                                                                        >  2:633035/1‑150 (MQ=255)

                           aCCCCACCCATGGAAAATTCAGACACCCGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAat                                                                                                                       <  2:316771/150‑1 (MQ=255)

                            ccccACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAata                                                                                                                      >  2:1740891/1‑150 (MQ=255)

                             cccacccaTGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAatat                                                                                                                     >  2:483796/1‑150 (MQ=255)

                                  ccaTGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCt                                                                                                                >  1:2758638/1‑150 (MQ=255)

                                  ccaTGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCt                                                                                                                >  2:2654942/1‑150 (MQ=255)

                                      ggAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCtgatg                                                                                                            >  2:3070774/1‑150 (MQ=255)

                                        aaaaTTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGAc                                                                                                          >  2:343487/1‑150 (MQ=255)

                                           aTTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTgg                                                                                                       >  2:2178915/1‑150 (MQ=255)

                                           aTTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTgg                                                                                                       <  1:3698928/150‑1 (MQ=255)

                                            ttCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGc                                                                                                      >  2:3530077/1‑150 (MQ=255)

                                            ttCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGc                                                                                                      <  1:380677/150‑1 (MQ=255)

                                            ttCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGc                                                                                                      <  2:2288977/150‑1 (MQ=255)

                                             tCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCg                                                                                                     <  1:3340198/150‑1 (MQ=255)

                                               aGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCggg                                                                                                   >  1:290291/1‑150 (MQ=255)

                                                   acCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAgg                                                                                               <  2:432734/150‑1 (MQ=255)

                                                          cATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGAt                                                                                        >  2:2037593/1‑150 (MQ=255)

                                                           aTTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATa                                                                                       >  2:1993602/1‑150 (MQ=255)

                                                           aTTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATa                                                                                       >  2:732100/1‑150 (MQ=255)

                                                            ttGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATaa                                                                                      >  1:1849603/1‑150 (MQ=255)

                                                             tGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATaaa                                                                                     <  2:399615/150‑1 (MQ=255)

                                                             tGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATaaa                                                                                     <  1:2524520/150‑1 (MQ=255)

                                                             tGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATaaa                                                                                     <  1:3277580/150‑1 (MQ=255)

                                                               aGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAata                                                                                   <  2:682695/150‑1 (MQ=255)

                                                                   ttttAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATAcc                                                                               <  2:1487671/150‑1 (MQ=255)

                                                                    tttAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCa                                                                              >  1:3406081/1‑150 (MQ=255)

                                                                    tttAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCa                                                                              <  2:179278/150‑1 (MQ=255)

                                                                    tttAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCa                                                                              <  2:1045251/150‑1 (MQ=255)

                                                                       aaaTGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGcc                                                                           >  2:3716106/1‑150 (MQ=255)

                                                                       aaaTGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGcc                                                                           <  2:1599494/150‑1 (MQ=255)

                                                                       aaaTGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGcc                                                                           >  1:1810713/1‑150 (MQ=255)

                                                                        aaTGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGccc                                                                          <  2:36307/150‑1 (MQ=255)

                                                                         aTGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCg                                                                         <  1:2888809/150‑1 (MQ=255)

                                                                            cATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGtt                                                                      <  1:208748/150‑1 (MQ=255)

                                                                             aTAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGttt                                                                     <  2:451678/150‑1 (MQ=255)

                                                                             aTAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGttt                                                                     <  2:668285/150‑1 (MQ=255)

                                                                               aaCCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTgg                                                                   >  1:1336515/1‑150 (MQ=255)

                                                                               aaCCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTgg                                                                   <  2:2170791/150‑1 (MQ=255)

                                                                               aaCCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTgg                                                                   >  1:3770954/1‑150 (MQ=255)

                                                                                aCCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGgc                                                                  <  1:1213535/150‑1 (MQ=255)

                                                                                aCCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGgc                                                                  >  1:1167499/1‑150 (MQ=255)

                                                                                   ggCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCt                                                               >  1:1047674/1‑150 (MQ=255)

                                                                                     cTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTAc                                                             >  2:334467/1‑150 (MQ=255)

                                                                                      tttATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACg                                                            >  2:2869241/1‑150 (MQ=255)

                                                                                        tataCATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGtt                                                          <  1:1552969/150‑1 (MQ=255)

                                                                                         ataCATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGttt                                                         <  2:770710/150‑1 (MQ=255)

                                                                                         ataCATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGttt                                                         >  1:1743500/1‑150 (MQ=255)

                                                                                         ataCATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGttt                                                         >  1:2166565/1‑150 (MQ=255)

                                                                                          taCATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTa                                                        >  2:876471/1‑150 (MQ=255)

                                                                                            cATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAAt                                                      <  1:3429540/150‑1 (MQ=255)

                                                                                               tttGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAAtttt                                                   <  2:1517088/150‑1 (MQ=255)

                                                                                                 tGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTAt                                                 <  1:965036/150‑1 (MQ=255)

                                                                                                   gCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGc                                               <  1:622657/150‑1 (MQ=255)

                                                                                                         aGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCg                                         >  1:1438275/1‑150 (MQ=255)

                                                                                                         aGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCg                                         <  1:2988053/150‑1 (MQ=255)

                                                                                                             cgTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCaa                                     <  1:1000933/150‑1 (MQ=255)

                                                                                                             cgTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCaa                                     >  1:558592/1‑150 (MQ=255)

                                                                                                              gTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCaaa                                    >  2:2476594/1‑150 (MQ=255)

                                                                                                              gTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCaaa                                    >  1:2018084/1‑150 (MQ=255)

                                                                                                              gTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCaaa                                    >  2:3225168/1‑150 (MQ=255)

                                                                                                                  tCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCTAAATcc                                <  2:2604536/150‑1 (MQ=255)

                                                                                                                  tCGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATcc                                <  2:1356274/150‑1 (MQ=255)

                                                                                                                   cGGAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCca                               <  2:3492188/150‑1 (MQ=255)

                                                                                                                    ggAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCcag                              >  1:3027792/1‑150 (MQ=255)

                                                                                                                    ggAAGAAACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCcag                              <  2:1174255/150‑1 (MQ=255)

                                                                                                                     gaagaaACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCcagc                             <  2:1294902/150‑1 (MQ=255)

                                                                                                                     gaagaaACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCcagc                             >  1:1665872/1‑150 (MQ=255)

                                                                                                                      aagaaACTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCcagca                            >  2:3092892/1‑150 (MQ=255)

                                                                                                                         aaaCTTTATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAgcg                         >  1:1929091/1‑150 (MQ=255)

                                                                                                                             tttATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATc                     >  2:46416/1‑150 (MQ=255)

                                                                                                                             tttATATTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATc                     >  2:1172436/1‑150 (MQ=255)

                                                                                                                                 tatTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCg                 <  1:1109325/150‑1 (MQ=255)

                                                                                                                                 tatTCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCg                 <  1:2654942/150‑1 (MQ=255)

                                                                                                                                    tCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTg              <  1:319792/150‑1 (MQ=255)

                                                                                                                                    tCCAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTg              <  1:934113/150‑1 (MQ=255)

                                                                                                                                     ccAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGa             >  1:3110144/1‑150 (MQ=255)

                                                                                                                                     ccAGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGa             >  2:3218931/1‑150 (MQ=255)

                                                                                                                                     agaGGTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGa             <  2:3803800/148‑1 (MQ=255)

                                                                                                                                        ggTCATAACGCTATTTTTTCAAGCCTGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGatca          <  2:2382017/150‑1 (MQ=255)

                                                                                                                                        ggTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGatca          >  2:2757714/1‑150 (MQ=255)

                                                                                                                                        ggTCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGatca          >  1:299007/1‑150 (MQ=255)

                                                                                                                                         gTCATAACGCTATTTTCTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGatcat         <  1:3218658/150‑1 (MQ=255)

                                                                                                                                          tCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGatcatc        >  2:3569502/1‑150 (MQ=255)

                                                                                                                                          tCATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGatcatc        >  1:3534703/1‑150 (MQ=255)

                                                                                                                                           cATAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGAtcatca       >  2:214187/1‑150 (MQ=255)

                                                                                                                                             tAACGCTATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGATCATCACg     >  1:3353495/1‑150 (MQ=255)

CACAATTCCATATTATTGGTGGTAGATACCCCACCCATGGAAAATTCAGACACCAGGCCATTGAGTTTTTTAAATGCATAACCGGCTTTATACATTTTGGCTGCCAGCGCGTAGTCGGAAGAAACTTTATATTCCAGGTCATAACGCCATTTTTTCAAGCCGGATACAGGGAAAAATATCGCCTGATGACTGGCGGGCAGGCTGTGATAAATATACCAGCCCGGTTTGGCGCTACGTTTAATTTTATGCCCGTCGCCAAAATCCAGCAGCGCATCGCCGGTGATCATCACGTTA  >  CP009273/2122506‑2122799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`