BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	2,240,676	C→A	D446Y (GAC→TAC)	lysP ←	lysine transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	2,240,676	0	C	A	100.0%	610.8 / NA	186	D446Y (GAC→TAC)	lysP	lysine transporter
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (88/98); total (88/98)

Only 100 of 186 total aligned reads displayed.

AAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTCAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAATACGTAACCGCGAC  >  CP009273/2240530‑2240822

aaggGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAAt                                                                                                                                                 >  1:2486109/1‑150 (MQ=255)

 aggGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATa                                                                                                                                                <  2:1048085/150‑1 (MQ=255)

 aggGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATa                                                                                                                                                >  2:2088401/1‑150 (MQ=255)

 aggGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATa                                                                                                                                                <  2:1048066/150‑1 (MQ=255)

 aggGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATa                                                                                                                                                >  1:1648591/1‑150 (MQ=255)

  gggAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAg                                                                                                                                               >  1:889556/1‑150 (MQ=255)

   ggaggaAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGt                                                                                                                                              >  2:2405991/1‑150 (MQ=255)

       gaAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCt                                                                                                                                          <  1:2759017/150‑1 (MQ=255)

       gaAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCt                                                                                                                                          <  2:2171595/150‑1 (MQ=255)

        aaaCTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCtt                                                                                                                                         >  1:1975198/1‑150 (MQ=255)

          aCTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTc                                                                                                                                       >  1:786694/1‑150 (MQ=255)

           cTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCa                                                                                                                                      >  2:2334142/1‑150 (MQ=255)

             tATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAgg                                                                                                                                    >  1:2182502/1‑150 (MQ=255)

              aTTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGa                                                                                                                                   <  1:3324514/150‑1 (MQ=255)

               tttCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGaa                                                                                                                                  >  1:2632/1‑150 (MQ=255)

                ttCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAAc                                                                                                                                 <  1:1576302/150‑1 (MQ=255)

                ttCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAAc                                                                                                                                 <  1:1327036/150‑1 (MQ=255)

                  cTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGc                                                                                                                               >  2:2518152/1‑150 (MQ=255)

                    tATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCtt                                                                                                                             <  1:2399422/150‑1 (MQ=255)

                    tATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCtt                                                                                                                             <  1:2610172/150‑1 (MQ=255)

                     aTCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTc                                                                                                                            <  2:2615094/150‑1 (MQ=255)

                          tCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGt                                                                                                                       >  1:439019/1‑150 (MQ=255)

                          tCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGt                                                                                                                       >  1:3075273/1‑150 (MQ=255)

                          tCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGt                                                                                                                       >  1:1235967/1‑150 (MQ=255)

                               gggAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTgg                                                                                                                  >  2:1227066/1‑150 (MQ=255)

                                ggAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGc                                                                                                                 >  1:2957405/1‑150 (MQ=255)

                                      tCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAg                                                                                                           >  2:309862/1‑150 (MQ=255)

                                           tCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATa                                                                                                      >  2:1873367/1‑150 (MQ=255)

                                             gccgTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAAt                                                                                                    <  2:1433182/147‑1 (MQ=255)

                                               tGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCa                                                                                                  <  1:3055954/150‑1 (MQ=255)

                                               tGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCa                                                                                                  <  1:353000/150‑1 (MQ=255)

                                                gTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAg                                                                                                 >  2:532237/1‑150 (MQ=255)

                                                gTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAg                                                                                                 >  2:2133397/1‑150 (MQ=255)

                                                  aGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGac                                                                                               >  1:2334393/1‑150 (MQ=255)

                                                    cGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGacac                                                                                             <  1:1678814/150‑1 (MQ=255)

                                                        cGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAgaa                                                                                         <  1:1283399/150‑1 (MQ=255)

                                                        cGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAgaa                                                                                         >  1:3754065/1‑150 (MQ=255)

                                                         gAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAgaat                                                                                        >  2:2527859/1‑150 (MQ=255)

                                                            gTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAgaatgaa                                                                                     <  1:1003390/150‑1 (MQ=255)

                                                             tGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAgaatgaat                                                                                    <  2:2873553/150‑1 (MQ=255)

                                                               aGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGc                                                                                  >  2:3745084/1‑150 (MQ=255)

                                                                gTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCg                                                                                 >  1:403227/1‑150 (MQ=255)

                                                                 ttCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGa                                                                                >  2:3657375/1‑150 (MQ=255)

                                                                 ttCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGa                                                                                <  2:2993403/150‑1 (MQ=255)

                                                                  tCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGaa                                                                               <  2:2182726/150‑1 (MQ=255)

                                                                    cTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGa                                                                             >  2:1573838/1‑150 (MQ=255)

                                                                       tAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCg                                                                          <  2:3073096/150‑1 (MQ=255)

                                                                          tCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGcc                                                                       <  1:2890854/150‑1 (MQ=255)

                                                                           cAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGccc                                                                      >  1:1392466/1‑150 (MQ=255)

                                                                               ttGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGt                                                                  <  1:2430134/150‑1 (MQ=255)

                                                                                  tAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTggg                                                               <  2:2543236/150‑1 (MQ=255)

                                                                                   aGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTAGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGga                                                              >  2:2515889/1‑150 (MQ=255)

                                                                                    gCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGgaa                                                             <  1:3288987/150‑1 (MQ=255)

                                                                                       gAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGgaagaa                                                          >  1:3676666/1‑150 (MQ=255)

                                                                                        aaCCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGaaa                                                         >  2:2659048/1‑150 (MQ=255)

                                                                                        aaCCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGaaa                                                         <  2:3113645/150‑1 (MQ=255)

                                                                                        aaCCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGaaa                                                         >  2:181357/1‑150 (MQ=255)

                                                                                        aaCCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGaaa                                                         >  2:1165864/1‑150 (MQ=255)

                                                                                         aCCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAAc                                                        <  1:2088401/150‑1 (MQ=255)

                                                                                          ccAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAAcc                                                       <  2:687517/150‑1 (MQ=255)

                                                                                            aaaTAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTg                                                     <  1:3640159/150‑1 (MQ=255)

                                                                                               taatCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAAc                                                  <  1:2971437/150‑1 (MQ=255)

                                                                                               taatCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAAc                                                  <  1:1069777/150‑1 (MQ=255)

                                                                                                   cAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTa                                              >  2:1727403/1‑150 (MQ=255)

                                                                                                     ggAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACg                                            <  2:1648591/150‑1 (MQ=255)

                                                                                                     ggAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACg                                            <  2:3157490/150‑1 (MQ=255)

                                                                                                     ggAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACg                                            <  1:2073728/150‑1 (MQ=255)

                                                                                                       aaCAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGc                                          <  2:3376326/150‑1 (MQ=255)

                                                                                                        aCAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGGAGAAACCTGAACGGTACGGCa                                         >  2:2863157/1‑150 (MQ=255)

                                                                                                          aGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCTGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGa                                       >  2:3755669/1‑150 (MQ=255)

                                                                                                            cGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATc                                     >  2:919385/1‑150 (MQ=255)

                                                                                                            cGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATc                                     <  1:756370/150‑1 (MQ=255)

                                                                                                             gggATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCg                                    >  2:734130/1‑150 (MQ=255)

                                                                                                             gggATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCg                                    <  1:1801225/150‑1 (MQ=255)

                                                                                                              ggATACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGt                                   <  1:1310558/150‑1 (MQ=255)

                                                                                                                aTACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTa                                 <  1:2527859/150‑1 (MQ=255)

                                                                                                                 tACCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTaa                                >  2:3718952/1‑150 (MQ=255)

                                                                                                                  aacAATATACGTTGCCGCTACGCAGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAATTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAATCCTGAACGGTTCGGCAGATCGTTAAt                               <  1:3219450/148‑1 (MQ=255)

                                                                                                                  aCCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAAt                               >  2:1617853/1‑150 (MQ=255)

                                                                                                                  aCCAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAAt                               >  2:2772958/1‑150 (MQ=255)

                                                                                                                   ccAATATACGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATg                              >  1:1173397/1‑150 (MQ=255)

                                                                                                                           cGTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTcc                      <  2:1277285/150‑1 (MQ=255)

                                                                                                                            gTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTccc                     >  1:3306012/1‑150 (MQ=255)

                                                                                                                            gTTGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTccc                     <  2:2957405/150‑1 (MQ=255)

                                                                                                                             ttGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCt                    >  1:3734850/1‑150 (MQ=255)

                                                                                                                             ttGCCGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCt                    <  2:67121/150‑1 (MQ=255)

                                                                                                                                ccGCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCa                 <  2:3491430/150‑1 (MQ=255)

                                                                                                                                  gCTACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAAt               <  2:2872154/150‑1 (MQ=255)

                                                                                                                                    tACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAATAc             >  2:2295042/1‑150 (MQ=255)

                                                                                                                                    tACGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAATAc             <  2:603188/150‑1 (MQ=255)

                                                                                                                                     aCGCCGCCCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAATACg            <  1:2944898/150‑1 (MQ=255)

                                                                                                                                       gccgccCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAATACGTa          <  2:1362784/150‑1 (MQ=255)

                                                                                                                                        ccgccCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAATACGTaa         >  2:2436843/1‑150 (MQ=255)

                                                                                                                                         cgccCCAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAATACGTAAc        <  2:109409/150‑1 (MQ=255)

                                                                                                                                           ccccAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAATACGTAACcg      <  2:3647416/150‑1 (MQ=255)

                                                                                                                                           ccccAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAATACGTAACcg      <  2:239878/150‑1 (MQ=255)

                                                                                                                                           ccccAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAATACGTAACcg      <  1:532237/150‑1 (MQ=255)

                                                                                                                                            cccAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAATACGTAACcgc     >  1:3209242/1‑150 (MQ=255)

                                                                                                                                             ccAGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAATACGTAACcgcg    >  1:1336163/1‑150 (MQ=255)

                                                                                                                                               aGTAAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAATACGTAACCGCGAc  <  1:2133397/150‑1 (MQ=255)

AAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCCGCTACGCCGCCCCAGTCAATAGTATCTTTCAGGAACGCTTCGTAGTTCTGGCCCAAAGTGATAATCAGACACAGAATGAATGCGAAGATCGGCCCCAGTGGGAAGAAACCTGAACGGTACGGCAGATCGTTAATGTCGTGTCCCTGCAATACGTAACCGCGAC  >  CP009273/2240530‑2240822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`