Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 2,450,339 A→T intergenic (‑48/+155) sixA ← / ← fadJ phosphohistidine phosphatase/fused enoyl‑CoA hydratase and epimerase and isomerase/3‑hydroxyacyl‑CoA dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,450,3390AT100.0% 737.8 / NA 226intergenic (‑48/+155)sixA/fadJphosphohistidine phosphatase/fused enoyl‑CoA hydratase and epimerase and isomerase/3‑hydroxyacyl‑CoA dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (99/127);  total (99/127)

Only 100 of 226 total aligned reads displayed.

CAGGCGAGATTCGTCACAACCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATCTGAAACCAGAGAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCCATTCAGCGCGGATTCATATAGCTT  >  CP009273/2450193‑2450485
                                                                                                                                                  |                                                                                                                                                  
cAGGCGAGATTCGTCACAACCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATAcc                                                                                                                                                 >  2:1651529/1‑150 (MQ=255)
 aGGCGAGATTCGTCACAACCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCa                                                                                                                                                <  1:1610257/150‑1 (MQ=255)
 aGGCGAGATTCGTCACAACCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCa                                                                                                                                                <  1:233792/150‑1 (MQ=255)
    cGAGATTCGTCACAACCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCagat                                                                                                                                             >  1:1704405/1‑149 (MQ=255)
     gagaTTCGTCACAACCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCagata                                                                                                                                            <  1:187983/150‑3 (MQ=255)
      agaTTCGTCACAACCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGataa                                                                                                                                           <  2:1436280/150‑1 (MQ=255)
      agaTTCGTCACAACCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGataa                                                                                                                                           >  1:2289803/1‑150 (MQ=255)
        aTTCGTCACAACCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGataaag                                                                                                                                         <  2:511068/150‑1 (MQ=255)
             tCACAACCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAAc                                                                                                                                    <  2:2838726/150‑1 (MQ=255)
              cacaACCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACg                                                                                                                                   <  1:3233785/150‑1 (MQ=255)
                caACCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAACGAAAACGGt                                                                                                                                 <  2:1981879/150‑1 (MQ=255)
                  aCCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTgg                                                                                                                               <  1:3052665/150‑1 (MQ=255)
                  aCCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCCGCGTCGCCGTGACGCATGATAAAAACTTGCAGATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTgg                                                                                                                               <  1:3052533/150‑1 (MQ=255)
                        aGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGTGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCa                                                                                                                         >  1:1085234/1‑150 (MQ=255)
                             tCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATtgtg                                                                                                                    >  2:2424505/1‑150 (MQ=255)
                                gagGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGcca                                                                                                                 <  2:3451771/150‑2 (MQ=255)
                                gagGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGcca                                                                                                                 <  2:2607078/150‑2 (MQ=255)
                                gagGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCt                                                                                                                 <  2:2278463/150‑1 (MQ=255)
                                   gACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTAt                                                                                                              >  2:3410749/1‑150 (MQ=255)
                                    aCGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATc                                                                                                             <  1:1286489/150‑1 (MQ=255)
                                     cGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATcc                                                                                                            >  2:2061789/1‑150 (MQ=255)
                                     cGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATcc                                                                                                            <  1:2550647/150‑1 (MQ=255)
                                     cGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATcc                                                                                                            <  2:2185461/150‑1 (MQ=255)
                                     cGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATcc                                                                                                            >  2:147547/1‑150 (MQ=255)
                                       aaCGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCAt                                                                                                          <  2:1842409/150‑1 (MQ=255)
                                          ggAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCa                                                                                                       >  1:1387616/1‑150 (MQ=255)
                                           gAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCAc                                                                                                      <  1:2930918/150‑1 (MQ=255)
                                             aTCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCg                                                                                                    >  1:2651029/1‑150 (MQ=255)
                                              tCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGa                                                                                                   <  2:3787263/150‑1 (MQ=255)
                                                aCTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAAt                                                                                                 >  1:2787976/1‑150 (MQ=255)
                                                aCTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAAt                                                                                                 <  2:1870769/150‑1 (MQ=255)
                                                  tGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGa                                                                                               <  2:2914452/150‑1 (MQ=255)
                                                     cggcATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAAc                                                                                            >  2:1193050/1‑150 (MQ=255)
                                                      ggcATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACg                                                                                           <  1:859567/150‑1 (MQ=255)
                                                         aTCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTg                                                                                        <  1:563843/150‑1 (MQ=255)
                                                            gAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGttt                                                                                     <  2:251219/150‑1 (MQ=255)
                                                              gggCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGttttt                                                                                   <  2:2961799/150‑1 (MQ=255)
                                                               ggCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGtttttt                                                                                  <  2:105111/150‑1 (MQ=255)
                                                               ggCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCCTATCCATTCACCGAATGAAACGCTGtttttt                                                                                  <  2:2291264/150‑1 (MQ=255)
                                                                gCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTa                                                                                 <  2:1512428/150‑1 (MQ=255)
                                                                     gTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCa                                                                            <  2:2138444/150‑1 (MQ=255)
                                                                       cGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAAt                                                                          <  1:836218/150‑1 (MQ=255)
                                                                         ccGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATgg                                                                        <  1:287534/150‑1 (MQ=255)
                                                                         ccGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATgg                                                                        <  2:671372/150‑1 (MQ=255)
                                                                         ccGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATgg                                                                        <  2:1116613/150‑1 (MQ=255)
                                                                           gTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCg                                                                      <  1:2861321/150‑1 (MQ=255)
                                                                           gTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCg                                                                      <  1:2860489/150‑1 (MQ=255)
                                                                              aCGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTaa                                                                   >  2:3513561/1‑150 (MQ=255)
                                                                                gCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGt                                                                 >  2:631574/1‑150 (MQ=255)
                                                                                 cATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGta                                                                <  1:1350602/150‑1 (MQ=255)
                                                                                    gATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAg                                                             >  2:3719547/1‑150 (MQ=255)
                                                                                    gATAAAAACTTGCATAGTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAg                                                             <  2:395239/150‑1 (MQ=255)
                                                                                     aTAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGt                                                            <  2:1488873/150‑1 (MQ=255)
                                                                                     aTAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGt                                                            >  1:2015953/1‑150 (MQ=255)
                                                                                     aTAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGt                                                            >  1:104778/1‑150 (MQ=255)
                                                                                     aTAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGt                                                            >  1:843850/1‑150 (MQ=255)
                                                                                     aTAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGt                                                            >  1:3337325/1‑150 (MQ=255)
                                                                                     aTAAAAACTTGCATAGTGCACCGCTTTTGTGAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGt                                                            <  1:3269269/150‑1 (MQ=255)
                                                                                      tAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTc                                                           >  1:626140/1‑150 (MQ=255)
                                                                                        aaaaCTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCaa                                                         >  1:2245589/1‑150 (MQ=255)
                                                                                          aaCTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAata                                                       <  2:2633796/150‑1 (MQ=255)
                                                                                           aCTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAatat                                                      <  1:3606371/150‑1 (MQ=255)
                                                                                           aCTTGCATAGTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAatat                                                      <  1:372357/150‑1 (MQ=255)
                                                                                            cTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATg                                                     <  2:1889177/150‑1 (MQ=255)
                                                                                            cTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATg                                                     <  2:3172739/150‑1 (MQ=255)
                                                                                              tGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCg                                                   >  1:773944/1‑150 (MQ=255)
                                                                                              tGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCg                                                   <  1:147555/150‑1 (MQ=255)
                                                                                                cATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGtt                                                 >  1:1841373/1‑150 (MQ=255)
                                                                                                cATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGtt                                                 >  2:1942836/1‑150 (MQ=255)
                                                                                                  tatTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTa                                               >  2:3282730/1‑150 (MQ=255)
                                                                                                    ttGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGTCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACa                                             <  1:1651529/150‑1 (MQ=255)
                                                                                                     tGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACAt                                            <  1:3386181/150‑1 (MQ=255)
                                                                                                       cACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACAttt                                          <  2:1318062/150‑1 (MQ=255)
                                                                                                       cACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACAttt                                          <  2:3085050/150‑1 (MQ=255)
                                                                                                         ccGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTg                                        <  1:3410749/150‑1 (MQ=255)
                                                                                                         ccGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTg                                        <  1:2225991/150‑1 (MQ=255)
                                                                                                           gCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGAc                                      >  1:1449553/1‑150 (MQ=255)
                                                                                                            cTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGAcc                                     >  1:3252380/1‑150 (MQ=255)
                                                                                                               ttGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAac                                  <  1:529302/150‑1 (MQ=255)
                                                                                                                tGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAaca                                 >  2:2243127/1‑150 (MQ=255)
                                                                                                                tGTTAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATAGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAaca                                 >  1:2287337/1‑150 (MQ=255)
                                                                                                                  ttAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACt                               <  2:843258/150‑1 (MQ=255)
                                                                                                                   tAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTc                              >  2:2219236/1‑150 (MQ=255)
                                                                                                                   tAACCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTc                              >  2:2972010/1‑150 (MQ=255)
                                                                                                                    aaCCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTGTACATTTTGACCAACACTcc                             >  2:2211986/1‑150 (MQ=255)
                                                                                                                     aCCAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTTAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCg                            <  2:1881391/150‑1 (MQ=255)
                                                                                                                      ccAGATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGc                           >  2:1594730/1‑150 (MQ=255)
                                                                                                                         gATTCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCCAt                        >  1:3456466/1‑150 (MQ=255)
                                                                                                                            tCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCCATTCa                     >  1:2089596/1‑150 (MQ=255)
                                                                                                                            tCGCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCCATTCa                     >  1:1171039/1‑150 (MQ=255)
                                                                                                                              gCCCGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCCATTCAgc                   >  1:96911/1‑150 (MQ=255)
                                                                                                                                 cGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGTCATTGTGCCTTATCCATACACCGAATGAAACTCTGAATTTTACCTCAATTGCGTAAGAATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCAATTCATcgcg                >  1:513628/1‑150 (MQ=255)
                                                                                                                                 cGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCCATTCAGcgcg                <  1:2424505/150‑1 (MQ=255)
                                                                                                                                 cGTTTTCTTTCATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCCATTCAGcgcg                <  1:1060586/150‑1 (MQ=255)
                                                                                                                                    tttctttcATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCCATTCAGCGCGGAt             >  2:3194678/1‑150 (MQ=255)
                                                                                                                                    tttctttcATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCCATTCAGCGCGGAt             >  2:3666162/1‑150 (MQ=255)
                                                                                                                                    tttctttcATCTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCCATTCAGCGCGGAt             >  2:2387135/1‑150 (MQ=255)
                                                                                                                                       ctttcATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCCATTCAGCGCGGATTCa          <  1:3513561/150‑1 (MQ=255)
                                                                                                                                        tttcATTTGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCCATTCAGCGCGGATTCat         <  1:3799368/150‑1 (MQ=255)
                                                                                                                                               tGATACCAGATAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCCATTCAGCGCGGATTCATATAGCtt  <  2:1387616/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
CAGGCGAGATTCGTCACAACCATTAGTGGTCAGAGGACGAACGGAATCACTGGCGGCATCGAGGGCTGCGTCGCCGTGACGCATGATAAAAACTTGCATATTGCACCGCTTTTGTTAACCAGATTCGCCCGTTTTCTTTCATCTGAAACCAGAGAAAGAAAACGGTGGCCGGCATTGTGCCTTATCCATTCACCGAATGAAACGCTGTTTTTTACCTCAATGGCGTAAGTATAGTCAATATGCGTTTACATTTTGACCAACACTCCGCCATTCAGCGCGGATTCATATAGCTT  >  CP009273/2450193‑2450485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑