| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 2,610,919 | C→A | intergenic (+3/‑18) | bepA → / → yfgD | periplasmic metalloprotease and chaperone for OM protein maintenance and assembly/putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,610,919 | 0 | C | A | 99.6% | 891.2 / NA | 269 | intergenic (+3/‑18) | bepA/yfgD | periplasmic metalloprotease and chaperone for OM protein maintenance and assembly/putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (149/119); minor base T (0/1); total (149/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 269 total aligned reads displayed.
CGGACGACTCGATCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTCGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACCCGCCGATGCGGCA > CP009273/2610772‑2611065 | cGGACGACTCGATCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGc < 1:938342/150‑1 (MQ=255) ggACGACTCGATCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCa < 1:302280/150‑1 (MQ=255) gacTCGATCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTaa > 2:1278950/1‑150 (MQ=255) gacTCGATCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTaa > 2:1335043/1‑150 (MQ=255) acTCGATCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTaaa > 2:1237105/1‑150 (MQ=255) cTCGATCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAg > 1:2817583/1‑150 (MQ=255) cTCGATCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAg < 2:2930144/150‑1 (MQ=255) tCGATCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAgg < 2:2442738/150‑1 (MQ=255) gATCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGgaa < 1:2215315/150‑1 (MQ=255) tCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGgaaga > 1:372568/1‑150 (MQ=255) tCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGgaaga > 1:522506/1‑150 (MQ=255) cAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGgaagaa > 2:3637242/1‑150 (MQ=255) aGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAAc < 2:3674067/150‑1 (MQ=255) ttCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGAcc < 2:2877404/150‑1 (MQ=255) ttCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGAcc < 2:1906329/150‑1 (MQ=255) cGCTGTTGAGTAGCGCCAGTTCGCTGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCaa < 1:2662557/150‑1 (MQ=255) cGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCaa > 2:2272085/1‑150 (MQ=255) cGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCaa < 1:2626571/150‑1 (MQ=255) gCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCaaa < 2:3303301/150‑1 (MQ=255) gTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAg < 2:1471576/150‑1 (MQ=255) gTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAg < 2:3271545/150‑1 (MQ=255) aGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTaa > 2:3341742/1‑150 (MQ=255) aGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTaa < 2:3672743/150‑1 (MQ=255) tAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTaaaa > 2:951146/1‑150 (MQ=255) aGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTaaaaa < 1:3226784/150‑1 (MQ=255) gcCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTAAGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGACTTATACCAAGATGTAATTAGCATTAAAGTAAGAACAATGAACAAACAGTTAAAAATCt > 2:1376/1‑150 (MQ=255) cAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCTGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTAc < 2:2867044/150‑1 (MQ=255) gTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCa > 1:1151087/1‑150 (MQ=255) gTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCa < 1:1335043/150‑1 (MQ=255) ttCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCAt > 2:76205/1‑150 (MQ=255) cAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAAcc < 1:3081811/150‑1 (MQ=255) cAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAAcc < 1:1237105/150‑1 (MQ=255) cAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAAcc < 2:2777345/150‑1 (MQ=255) cAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAAcc > 1:3738034/1‑150 (MQ=255) aGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAAccc > 2:3387786/1‑150 (MQ=255) aGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAAccc > 2:201058/1‑150 (MQ=255) gTGAAATTAGGCAGCCTNCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGATTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCAc < 1:1637988/150‑1 (MQ=255) gTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCAc > 2:2887575/1‑150 (MQ=255) aaaTTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCt < 2:1427501/150‑1 (MQ=255) aaTTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTg < 1:2859336/150‑1 (MQ=255) aaTTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTg > 1:1390544/1‑150 (MQ=255) aTTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGt > 2:657858/1‑150 (MQ=255) aTTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGt < 2:20427/150‑1 (MQ=255) aGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCa > 2:2488569/1‑150 (MQ=255) ggCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCaa > 2:114476/1‑150 (MQ=255) ggCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCaa < 2:1563070/150‑1 (MQ=255) gCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATACCCCACGCTGTTCaaa > 2:718522/1‑150 (MQ=255) cAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAag > 2:1061521/1‑150 (MQ=255) aacaaGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGa > 2:2559765/1‑150 (MQ=255) caaGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGaaa > 1:1024699/1‑150 (MQ=255) caaGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGaaa > 1:917850/1‑150 (MQ=255) aGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACg > 1:3290371/1‑150 (MQ=255) aGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACg > 2:2336087/1‑150 (MQ=255) aGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACg > 1:2425058/1‑150 (MQ=255) cgcgTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCt > 1:3618326/1‑150 (MQ=255) gTTACGATGCGCGCATCGACCAGGTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGaa < 2:598901/150‑1 (MQ=255) ttACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAAc < 1:2338167/150‑1 (MQ=255) tACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAAcc < 2:527752/150‑1 (MQ=255) cgcATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTgaaag < 2:2175145/150‑1 (MQ=255) aTCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTgaaagaaa > 1:2541137/1‑150 (MQ=255) cGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAAc < 1:1438210/150‑1 (MQ=255) gACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACg < 1:35256/150‑1 (MQ=255) aCCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACgg > 1:3491286/1‑150 (MQ=255) aGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGt > 1:1921806/1‑150 (MQ=255) aGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGt > 1:577999/1‑150 (MQ=255) ttGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTgg > 2:2694343/1‑150 (MQ=255) tGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGa < 2:3454546/150‑1 (MQ=255) ccAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCa > 1:2659592/1‑150 (MQ=255) aGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGa > 2:1517862/1‑150 (MQ=255) gCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGaa > 2:2837286/1‑150 (MQ=255) gCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGaa > 2:3581200/1‑150 (MQ=255) tGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAgt > 1:636781/1‑150 (MQ=255) cAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAgtgg < 1:3157656/150‑1 (MQ=255) cAGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAgtgg < 1:1165908/150‑1 (MQ=255) aGGAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAgtggt < 2:1442530/150‑1 (MQ=255) ggAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAgtggtg < 2:1177815/150‑1 (MQ=255) gAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGc > 2:3653040/1‑150 (MQ=255) gAACGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGc > 2:1759004/1‑150 (MQ=255) aaCGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGct > 2:3216768/1‑150 (MQ=255) cGCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGctct > 1:1716651/1‑150 (MQ=255) gCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTa > 1:1672458/1‑150 (MQ=255) gCTTTAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTa > 1:1993910/1‑150 (MQ=255) tttAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTAcc > 1:3790733/1‑150 (MQ=255) tttAAGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTAcc < 1:3342685/150‑1 (MQ=255) aaGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTg < 2:3519211/150‑1 (MQ=255) aaGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTg > 2:3407011/1‑150 (MQ=255) aGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTga > 2:3620273/1‑150 (MQ=255) aGCCTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTga < 2:470050/150‑1 (MQ=255) aGCATTATACCAAGATGTAATTTGCATTAAAGGAAGAACAATGACCAACCAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGTGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTga < 1:1278950/150‑1 (MQ=255) cTTATACCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGac > 1:2667255/1‑150 (MQ=255) taCCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACAccc < 2:187911/150‑1 (MQ=255) aCCAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATCACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACccg < 2:1700402/150‑1 (MQ=255) ccAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACccgc > 2:3469188/1‑150 (MQ=255) ccAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACccgc > 2:390533/1‑150 (MQ=255) ccAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACccgc > 1:988746/1‑150 (MQ=255) ccAAGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATATACCATAACCAACGCTGATCAAAGAGCCGGGAAAAGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACccgc > 2:3048150/1‑150 (MQ=255) aaGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACccgccg > 1:1473968/1‑150 (MQ=255) aaGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACccgccg > 2:2242831/1‑150 (MQ=255) aGATGTAATTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACCCGCCGa > 1:1849438/1‑150 (MQ=255) aTTAGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACCCGCCGATGCGGCa < 1:219631/150‑1 (MQ=255) | CGGACGACTCGATCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAATTCGCATTAAAGGAAGAACAATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACCCGCCGATGCGGCA > CP009273/2610772‑2611065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |