Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 2,792,318 C→A intergenic (‑464/‑205) stpA ← / → alaE DNA binding protein, nucleoid‑associated/alanine exporter, alanine‑inducible, stress‑responsive

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,792,3180CA100.0% 760.9 / NA 225intergenic (‑464/‑205)stpA/alaEDNA binding protein, nucleoid‑associated/alanine exporter, alanine‑inducible, stress‑responsive
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (96/129);  total (96/129)

Only 100 of 235 total aligned reads displayed.

TACATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATCATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTATGCGAAAATGCAGATGGCAATGA  >  CP009273/2792171‑2792464
                                                                                                                                                   |                                                                                                                                                  
tACATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAaataat                                                                                                                                                  <  2:947826/150‑1 (MQ=255)
tACATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAaataat                                                                                                                                                  <  1:287629/150‑1 (MQ=255)
  cATTGTCTGTCATAAAAAATGCTGAAAATGACCCAGCTACTTCATACACCGAATTCTCTTCGATTATAGCGTTACCTCACCCCCATACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAatat                                                                                                                                                <  1:1988505/150‑1 (MQ=255)
  cATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAatat                                                                                                                                                >  1:1036746/1‑150 (MQ=255)
   aTTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATc                                                                                                                                               <  1:3359697/150‑1 (MQ=255)
   aTTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATc                                                                                                                                               <  2:560890/150‑1 (MQ=255)
     tGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCgg                                                                                                                                             <  1:131549/150‑1 (MQ=255)
        cTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCAt                                                                                                                                          >  1:1857744/1‑150 (MQ=255)
         tGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATg                                                                                                                                         >  2:386519/1‑150 (MQ=255)
           gCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTa                                                                                                                                       <  2:1160903/150‑1 (MQ=255)
                 aaaaTGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATc                                                                                                                                 >  2:1161403/1‑150 (MQ=255)
                 aaaaTGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATc                                                                                                                                 >  2:2816993/1‑150 (MQ=255)
                 aaaaTGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATc                                                                                                                                 >  2:3707195/1‑150 (MQ=255)
                 aaaaTGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATc                                                                                                                                 <  2:2146192/150‑1 (MQ=255)
                  aaaTGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATcc                                                                                                                                >  2:522767/1‑150 (MQ=255)
                    aTGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCcac                                                                                                                              <  1:3012063/150‑1 (MQ=255)
                    aTGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCcac                                                                                                                              <  1:1494931/150‑1 (MQ=255)
                      gCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACaa                                                                                                                            <  1:3140109/150‑1 (MQ=255)
                               gACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACaaaa                                                                                                                   >  2:272608/1‑150 (MQ=255)
                                       tactacATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGcc                                                                                                           >  2:1701229/1‑150 (MQ=255)
                                        actacATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCg                                                                                                          >  1:309754/1‑150 (MQ=255)
                                          tacatacaCCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGtt                                                                                                        <  2:2532250/150‑1 (MQ=255)
                                          tacatacaCCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGtt                                                                                                        <  2:3120466/150‑1 (MQ=255)
                                          tacatacaCCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGtt                                                                                                        <  2:2956104/150‑1 (MQ=255)
                                              tacaCCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACgg                                                                                                    >  2:1808557/1‑150 (MQ=255)
                                                  ccGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAata                                                                                                <  2:3531916/150‑1 (MQ=255)
                                                   cGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAatat                                                                                               <  1:317197/150‑1 (MQ=255)
                                                     aaTTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATAttt                                                                                             >  2:1152896/1‑150 (MQ=255)
                                                      aTTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATAtttt                                                                                            >  1:3532376/1‑150 (MQ=255)
                                                         ctctACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATc                                                                                         <  1:2306892/150‑1 (MQ=255)
                                                         ctctACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATc                                                                                         >  1:88983/1‑150 (MQ=255)
                                                          tctACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCt                                                                                        >  1:2748746/1‑150 (MQ=255)
                                                          tctACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCt                                                                                        <  1:3482041/150‑1 (MQ=255)
                                                               gCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACaaa                                                                                   >  2:1318529/1‑150 (MQ=255)
                                                               gCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACaaa                                                                                   >  1:1768688/1‑150 (MQ=255)
                                                                cTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACaaaa                                                                                  >  2:815284/1‑150 (MQ=255)
                                                                cTTATAGCGTTACCTCACCCCCAAACTCTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTACAAATCCACAATGTACAAAAAACGAGCCGTTACGGACGATTTTATCGACcaaa                                                                                  >  2:3165980/1‑150 (MQ=255)
                                                                  tataGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAAc                                                                                <  2:1997320/150‑1 (MQ=255)
                                                                   ataGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACt                                                                               <  2:1409733/150‑1 (MQ=255)
                                                                   ataGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACt                                                                               <  2:786405/150‑1 (MQ=255)
                                                                    taGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTg                                                                              <  1:1466641/150‑1 (MQ=255)
                                                                    taGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTg                                                                              <  2:2682064/150‑1 (MQ=255)
                                                                    taGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTg                                                                              <  1:1838929/150‑1 (MQ=255)
                                                                      gCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGAc                                                                            <  1:2946962/150‑1 (MQ=255)
                                                                       cGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACt                                                                           >  1:2095173/1‑150 (MQ=255)
                                                                        gTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACta                                                                          <  1:329472/150‑1 (MQ=255)
                                                                         ttACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGACATATCTAATTTATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACtaa                                                                         <  2:2968176/150‑1 (MQ=255)
                                                                         ttACCTCACCCCCAAACTTTAATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACtaa                                                                         <  1:2386212/150‑1 (MQ=255)
                                                                          tACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACtaaa                                                                        >  1:1358227/1‑150 (MQ=255)
                                                                           aCCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACtaaat                                                                       >  1:1732873/1‑150 (MQ=255)
                                                                           aCCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACtaaat                                                                       >  2:636206/1‑150 (MQ=255)
                                                                            ccTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACtaaata                                                                      <  2:1879871/150‑1 (MQ=255)
                                                                                aCCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATaaaaa                                                                  <  1:3643910/150‑1 (MQ=255)
                                                                                  ccccAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAAtt                                                                >  1:3786987/1‑150 (MQ=255)
                                                                                    ccAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAAtttt                                                              <  2:3097851/150‑1 (MQ=255)
                                                                                      aaaCTTTCATTAGTGATATTAAATGTAAGGCAATATCTAATTTATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTc                                                            <  1:1080375/150‑1 (MQ=255)
                                                                                       aaCTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCa                                                           <  2:1992487/150‑1 (MQ=255)
                                                                                         cTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACt                                                         >  2:1621355/1‑150 (MQ=255)
                                                                                              aTTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTg                                                    <  1:1006422/150‑1 (MQ=255)
                                                                                              aTTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTg                                                    <  2:1229066/150‑1 (MQ=255)
                                                                                               ttAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGa                                                   <  2:1320846/150‑1 (MQ=255)
                                                                                                tAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGAt                                                  <  1:2488479/150‑1 (MQ=255)
                                                                                                tAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGAt                                                  <  2:3685948/150‑1 (MQ=255)
                                                                                                tAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGAt                                                  <  2:3727572/150‑1 (MQ=255)
                                                                                                tAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGAt                                                  <  1:612860/150‑1 (MQ=255)
                                                                                                tAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGAt                                                  <  1:582089/150‑1 (MQ=255)
                                                                                                 aGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGAtt                                                 >  1:13624/1‑150 (MQ=255)
                                                                                                  gTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTa                                                <  2:2444463/150‑1 (MQ=255)
                                                                                                    gATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGt                                              <  2:121345/150‑1 (MQ=255)
                                                                                                    gATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGt                                              <  2:121332/150‑1 (MQ=255)
                                                                                                     atatTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTc                                             <  2:126009/150‑1 (MQ=255)
                                                                                                     atatTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTc                                             <  2:127143/150‑1 (MQ=255)
                                                                                                      tatTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCa                                            <  1:3709642/150‑1 (MQ=255)
                                                                                                         tAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAg                                         <  1:1657151/150‑1 (MQ=255)
                                                                                                         tAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAg                                         <  1:2591567/150‑1 (MQ=255)
                                                                                                          aaaGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGc                                        >  2:1855506/1‑150 (MQ=255)
                                                                                                           aaGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGcc                                       <  1:2816993/150‑1 (MQ=255)
                                                                                                              gTAAGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGc                                    >  2:1751581/1‑150 (MQ=255)
                                                                                                                 aGGCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGat                                 >  1:275630/1‑150 (MQ=255)
                                                                                                                   gCCATATCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGatat                               <  2:3442442/150‑1 (MQ=255)
                                                                                                                      atatCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACg                            <  1:3664993/150‑1 (MQ=255)
                                                                                                                       tatCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATATCCAGCGATATACGc                           >  2:893619/1‑150 (MQ=255)
                                                                                                                       tatCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGc                           >  1:450873/1‑150 (MQ=255)
                                                                                                                        atCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCt                          <  1:1266621/150‑1 (MQ=255)
                                                                                                                        atCTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCt                          >  1:1156759/1‑150 (MQ=255)
                                                                                                                          cTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTAt                        >  2:1030938/1‑150 (MQ=255)
                                                                                                                          cTAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTAt                        >  1:885417/1‑150 (MQ=255)
                                                                                                                           tAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTATg                       >  2:2422372/1‑150 (MQ=255)
                                                                                                                           tAATTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTATg                       >  1:3370999/1‑150 (MQ=255)
                                                                                                                            aaTTGATTTAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTATGc                      >  1:1298115/1‑150 (MQ=255)
                                                                                                                                  tttAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTATGCGAAAAt                >  1:2371665/1‑150 (MQ=255)
                                                                                                                                  tttAATTAAAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTATGCGAAAAt                <  1:784674/150‑1 (MQ=255)
                                                                                                                                  ataaattaaAAATAAATAATCTCGGCATCTAAAAATCCACACTGTACAAAAAACGAGCCGATACGGAATAATTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGACATAGCCAGCGATATACGCTATGCGAAAAt                <  2:2631068/147‑1 (MQ=255)
                                                                                                                                    taattaaAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTAACGGAATATTTAATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGATATGCGAAAATGc              >  1:529219/1‑150 (MQ=255)
                                                                                                                                        taaAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTATGCGAAAATGCAGAt          <  2:2920515/150‑1 (MQ=255)
                                                                                                                                        taaAAATAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTATGCGAAAATGCAGAt          <  1:2914551/150‑1 (MQ=255)
                                                                                                                                          aaaaTAAATAATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTATGCGAAAATGCAGATgg        >  2:3262095/1‑150 (MQ=255)
                                                                                                                                            aataaataATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTATGCGAAAATGCAGATGGCa      >  1:2194115/1‑150 (MQ=255)
                                                                                                                                                aataatATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTATGCGAAAATGCAGATGGCAATga  >  2:2605095/1‑150 (MQ=255)
                                                                                                                                                aataatATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTATGCGAAAATGCAGATGGCAATga  >  1:1434057/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
TACATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCTAATTGATTTAATTAAAAATAAATCATATCGGCATGTAAAAATCCACAATGTACAAAAAACGAGCCGTTACGGAATATTTTATCTACAAAAACTGACTAAATAAAAATTTTTCACTAATTGATTAGTCATAGCCAGCGATATACGCTATGCGAAAATGCAGATGGCAATGA  >  CP009273/2792171‑2792464

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: