| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 3,138,648 | T→A | N325Y (AAC→TAC) | hybO ← | hydrogenase 2, small subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,138,648 | 0 | T | A | 99.5% | 689.1 / NA | 205 | N325Y (AAC→TAC) | hybO | hydrogenase 2, small subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base A (102/102); total (102/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 205 total aligned reads displayed.
TTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTTAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATT > CP009273/3138502‑3138794 | ttATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAAc < 2:3580446/150‑1 (MQ=255)ttATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAAc < 1:2961136/150‑1 (MQ=255)ttATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCAAACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAAc < 1:3727348/150‑1 (MQ=255) ttCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATc > 1:3084325/1‑150 (MQ=255) tctcCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATcc < 1:3349483/150‑1 (MQ=255) tcCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCgg > 2:3785097/1‑150 (MQ=255) cccGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGtt < 1:122477/150‑1 (MQ=255) ccGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGttt > 1:1274112/1‑150 (MQ=255) cGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTc > 1:753265/1‑150 (MQ=255) gTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCt < 1:3124196/150‑1 (MQ=255) tGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCtg > 1:1158293/1‑150 (MQ=255) gTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGa < 1:3679776/150‑1 (MQ=255) cGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAAcgcg > 1:2266930/1‑150 (MQ=255) gTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCgg > 2:3419861/1‑150 (MQ=255) gTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCgg > 2:2109062/1‑150 (MQ=255) tATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAg > 1:2625609/1‑150 (MQ=255) aTCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGt > 1:2980540/1‑150 (MQ=255) tctttcttTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGtt < 2:1643984/150‑1 (MQ=255) tctttcttTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGta < 1:1248756/150‑2 (MQ=255) ctttctttTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGttt < 2:3291348/150‑1 (MQ=255) ctttTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGAtt < 2:1233261/150‑1 (MQ=255) ctttTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGAtt > 2:2081373/1‑150 (MQ=255) ttttGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGAttt < 2:808711/150‑1 (MQ=255) ttttGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGAttt < 2:3259590/150‑1 (MQ=255) tttGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGAtttt > 2:3116169/1‑150 (MQ=255) cTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGAc < 2:530794/150‑1 (MQ=255) cTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGAc < 1:973931/150‑1 (MQ=255) cTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGAc < 1:1840853/150‑1 (MQ=255) tGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGACCGCGGAGTTTGATTTTCGACg > 1:3404518/1‑150 (MQ=255) gacgacCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGt < 1:2194942/150‑1 (MQ=255) gacCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTgg > 1:1347057/1‑150 (MQ=255) acCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGc > 2:1301021/1‑150 (MQ=255) acCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGc > 2:1892592/1‑150 (MQ=255) cAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAg < 1:3059211/150‑1 (MQ=255) aGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGc > 2:2338540/1‑150 (MQ=255) aGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGc > 1:2880797/1‑150 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTg > 2:768407/1‑150 (MQ=255) aCGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTgatg < 1:2787271/150‑1 (MQ=255) cGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTgatgg > 1:500735/1‑150 (MQ=255) gCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTgatgga > 2:748249/1‑150 (MQ=255) cACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTgatggat > 2:3646974/1‑150 (MQ=255) gCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCt > 1:1572119/1‑150 (MQ=255) gCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCt > 1:658346/1‑150 (MQ=255) gCCATCACGCTGACACCGGCAACCAACCCAACCACACCGACGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTATACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCt < 2:539832/150‑1 (MQ=255) ccATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCtt > 1:1012972/1‑150 (MQ=255) ccATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCtt > 2:1568261/1‑150 (MQ=255) cATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCttt < 1:1777553/150‑1 (MQ=255) cACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATg < 1:3551743/150‑1 (MQ=255) cGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGa > 2:442815/1‑150 (MQ=255) acacCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCg > 1:285411/1‑150 (MQ=255) acCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGAt < 1:3012945/150‑1 (MQ=255) acCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGAt > 1:3383643/1‑150 (MQ=255) caaccaacCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACctt < 2:1814520/150‑1 (MQ=255) ccaacccaacCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACcttctt < 2:2736390/150‑1 (MQ=255) ccaacccaacCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACcttctt < 2:503929/150‑1 (MQ=255) ccaacccaacCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACcttctt > 1:2404512/1‑150 (MQ=255) acccaaccACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGt > 1:413859/1‑150 (MQ=255) acccaaccACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGt > 1:2321890/1‑150 (MQ=255) cccaaccACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGtt < 2:1158293/150‑1 (MQ=255) cccaaccACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGtt < 1:2967115/150‑1 (MQ=255) cccaaccACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGtt > 1:3464896/1‑150 (MQ=255) cccaaccACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGtt < 1:977630/150‑1 (MQ=255) aaccACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCGGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGGTACa > 2:386732/1‑150 (MQ=255) accACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAg > 2:3698114/1‑150 (MQ=255) cacaCCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGcc > 1:2167405/1‑150 (MQ=255) cacaCCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGcc < 2:641013/150‑1 (MQ=255) cacaCCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGcc < 2:3520267/150‑1 (MQ=255) acacCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCa < 1:137686/150‑1 (MQ=255) acacCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCa > 2:2669494/1‑150 (MQ=255) cacCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCAt < 1:3173597/150‑1 (MQ=255) ccgccgAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAg > 1:2553168/1‑150 (MQ=255) cgccgAGCAAACCAATCGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGc < 1:14965/150‑1 (MQ=255) ccgAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCaa > 1:269142/1‑150 (MQ=255) gCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGt < 1:1750533/150‑1 (MQ=255) cAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTg < 2:1713102/150‑1 (MQ=255) aCCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGAcc < 2:1356344/150‑1 (MQ=255) tAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCg < 2:1939546/150‑1 (MQ=255) aGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGc > 2:1136496/1‑150 (MQ=255) gcgcCTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGcc < 2:2158930/150‑1 (MQ=255) ccTGCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCAcc < 1:241061/150‑1 (MQ=255) gCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGc < 1:454792/150‑1 (MQ=255) gCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGc < 1:577038/150‑1 (MQ=255) gCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGc > 2:929412/1‑150 (MQ=255) gCAGAGACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGc > 2:3717984/1‑150 (MQ=255) agagACGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCca > 1:3448187/1‑150 (MQ=255) agaCGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCcaca > 2:1034478/1‑150 (MQ=255) gaCGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCcacac < 2:947417/150‑1 (MQ=255) gaCGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCcacac < 2:2471892/150‑1 (MQ=255) cGTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCCacacac > 2:222754/1‑150 (MQ=255) gTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCCacacaca > 2:3637777/1‑149 (MQ=255) gTTGCCGCCCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCCacacaca > 2:865862/1‑149 (MQ=255) gccCTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCCACACACAGCCAAc > 1:610098/1‑150 (MQ=255) cccTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCCACACACAGCCAACa < 1:1758122/150‑1 (MQ=255) cccTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCCACACACAGCCAACa > 2:1296949/1‑150 (MQ=255) ccTCTTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCCACACACAGCCAACAt > 1:511061/1‑150 (MQ=255) ctTTAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCCACACACAGCCAACATCGc > 1:2127898/1‑150 (MQ=255) ttAGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCCACACACAGCCAACATCGCAg > 2:2830718/1‑150 (MQ=255) aGCGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCCACACACAGCCAACATCGCAGaa > 1:3786025/1‑150 (MQ=255) cGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCCACACACAGCCAACATCGCAGAAtt < 2:2880841/150‑1 (MQ=255) cGTAAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCCACACACAGCCAACATCGCAGAAtt < 2:1756886/150‑1 (MQ=255) | TTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACGTTGCCGCCCTCTTTAGCGTTAACATCCGGTTTCTGTGAACGCGGAGTTTGATTTTCGACGTTGGCAAGCTGATGGATGCCTTTATGGAAGCCGATACCTTCTTCGTTACAGCCATAGCAAGGGTGACCAATCGCCACCGGCCACACACCGCCAACATCGCAGAATT > CP009273/3138502‑3138794 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |