BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	3,576,745	G→T	pseudogene (348/381 nt)	yrhA →	pseudogene, interrupted by IS1E

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	3,576,745	0	G	T	100.0%	587.4 / NA	177	pseudogene (348/381 nt)	yrhA	pseudogene, interrupted by IS1E
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (97/80); total (97/80)

Only 100 of 177 total aligned reads displayed.

AAGAGCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGG  >  CP009273/3576598‑3576891

 agagCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATc                                                                                                                                                 >  2:158482/1‑150 (MQ=255)

 agagCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATc                                                                                                                                                 <  2:2903504/150‑1 (MQ=255)

 agagCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATc                                                                                                                                                 <  2:1936752/150‑1 (MQ=255)

    gCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCggg                                                                                                                                              <  2:2030945/150‑1 (MQ=255)

     cAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCgggg                                                                                                                                             >  1:2898905/1‑150 (MQ=255)

      aaTGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGa                                                                                                                                            >  2:3396395/1‑150 (MQ=255)

      aaTGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGa                                                                                                                                            >  2:2702668/1‑150 (MQ=255)

       atggatggATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGAt                                                                                                                                           <  2:2838170/150‑1 (MQ=255)

        tggatggaTTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGAtt                                                                                                                                          <  2:3064567/150‑1 (MQ=255)

        tggatggaTTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGAtt                                                                                                                                          <  1:3565552/150‑1 (MQ=255)

           atggatTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATtata                                                                                                                                       >  1:1711251/1‑150 (MQ=255)

            tggatTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAg                                                                                                                                      <  1:2218892/150‑1 (MQ=255)

              gatTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCa                                                                                                                                    >  2:3721732/1‑150 (MQ=255)

               atTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCAt                                                                                                                                   >  1:3355835/1‑150 (MQ=255)

               atTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCAt                                                                                                                                   <  2:1348402/150‑1 (MQ=255)

                 tCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCAttt                                                                                                                                 <  2:2703947/150‑1 (MQ=255)

                 tCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCAttt                                                                                                                                 >  1:3382748/1‑150 (MQ=255)

                    aaGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTAGAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCaa                                                                                                                              <  1:380367/150‑1 (MQ=255)

                     aGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAat                                                                                                                             >  1:919465/1‑150 (MQ=255)

                       ttAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAatat                                                                                                                           <  1:1467801/150‑1 (MQ=255)

                        tAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATAtt                                                                                                                          <  2:1112484/150‑1 (MQ=255)

                            ggATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACt                                                                                                                      >  2:847472/1‑150 (MQ=255)

                             gATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACtt                                                                                                                     <  1:2543016/150‑1 (MQ=255)

                               ttACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCATTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTAt                                                                                                                   <  2:630760/150‑1 (MQ=255)

                                   gATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACa                                                                                                               >  1:3420870/1‑150 (MQ=255)

                                   gATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACa                                                                                                               >  1:1540729/1‑150 (MQ=255)

                                    attattTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACAt                                                                                                              <  1:2174709/150‑1 (MQ=255)

                                     ttattTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACAtt                                                                                                             >  1:524707/1‑150 (MQ=255)

                                     ttattTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACAtt                                                                                                             >  1:1443891/1‑150 (MQ=255)

                                         ttAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAg                                                                                                         >  1:1785208/1‑150 (MQ=255)

                                          tAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAgg                                                                                                        <  2:2649137/150‑1 (MQ=255)

                                           aGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGt                                                                                                       <  1:2386871/150‑1 (MQ=255)

                                           aGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGt                                                                                                       >  2:2703016/1‑150 (MQ=255)

                                           aGCCTCTCGAGTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGt                                                                                                       <  1:2877505/150‑1 (MQ=255)

                                              ctctCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGAt                                                                                                    <  1:680040/150‑1 (MQ=255)

                                                 tcGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGAtgct                                                                                                 >  2:2919770/1‑150 (MQ=255)

                                                 tcGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGAtgct                                                                                                 <  2:3644663/150‑1 (MQ=255)

                                                 tcGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGAtgct                                                                                                 >  2:1549910/1‑150 (MQ=255)

                                                  cGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGAtgctg                                                                                                >  1:1387821/1‑150 (MQ=255)

                                                  cGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGAtgctg                                                                                                >  1:1386739/1‑150 (MQ=255)

                                                     ttCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCa                                                                                             >  1:785712/1‑150 (MQ=255)

                                                      tCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCaa                                                                                            <  1:3721732/150‑1 (MQ=255)

                                                           aaCCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTAc                                                                                       >  2:3374222/1‑150 (MQ=255)

                                                           aaCCTTAAGTTAATAACCTTTTTGCCGTATATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTAc                                                                                       <  1:3082607/150‑1 (MQ=255)

                                                             ccTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTg                                                                                     <  1:1531942/150‑1 (MQ=255)

                                                                 catttAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGAttt                                                                                 <  2:2502782/147‑1 (MQ=255)

                                                                 cAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGAttt                                                                                 <  2:1769448/150‑1 (MQ=255)

                                                                  aGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTa                                                                                >  1:2001419/1‑150 (MQ=255)

                                                                  aGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTa                                                                                <  1:2002162/150‑1 (MQ=255)

                                                                    ttAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAgt                                                                              <  1:2831551/150‑1 (MQ=255)

                                                                    ttAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAgt                                                                              <  1:2500561/150‑1 (MQ=255)

                                                                     tAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAgtg                                                                             >  1:2964804/1‑150 (MQ=255)

                                                                     tAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAgtg                                                                             >  1:2964818/1‑150 (MQ=255)

                                                                     tAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAgtg                                                                             >  2:2887544/1‑150 (MQ=255)

                                                                        aaaCCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTat                                                                          >  2:3456186/1‑150 (MQ=255)

                                                                        aaaCCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTat                                                                          >  1:2248608/1‑150 (MQ=255)

                                                                          aCCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTatga                                                                        >  2:480387/1‑150 (MQ=255)

                                                                          aCCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTatga                                                                        >  2:811835/1‑150 (MQ=255)

                                                                           ccTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTatgat                                                                       <  2:35400/150‑1 (MQ=255)

                                                                             tttttGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATgg                                                                     <  1:1434490/150‑1 (MQ=255)

                                                                                  gCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGttt                                                                <  2:108624/150‑1 (MQ=255)

                                                                                  gCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGttt                                                                <  2:2173559/150‑1 (MQ=255)

                                                                                    cGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGttttt                                                              <  2:3022919/150‑1 (MQ=255)

                                                                                    cGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGttttt                                                              <  1:2715193/150‑1 (MQ=255)

                                                                                     gTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTg                                                             >  1:3279839/1‑150 (MQ=255)

                                                                                      tAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGa                                                            >  2:755881/1‑150 (MQ=255)

                                                                                       aaaTGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAg                                                           >  2:2867475/1‑150 (MQ=255)

                                                                                        aaTGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAgg                                                          >  1:2970773/1‑150 (MQ=255)

                                                                                         aTGAATTTTATAGAAATNATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGt                                                         <  1:988214/150‑1 (MQ=255)

                                                                                         aTGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGt                                                         >  1:3200855/1‑150 (MQ=255)

                                                                                             aTTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTc                                                     >  2:2382130/1‑150 (MQ=255)

                                                                                             aTTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTc                                                     <  1:3623685/150‑1 (MQ=255)

                                                                                                  ataGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTg                                                >  1:951886/1‑150 (MQ=255)

                                                                                                     gAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCt                                             >  1:2067332/1‑150 (MQ=255)

                                                                                                     gAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCt                                             >  1:1611293/1‑150 (MQ=255)

                                                                                                            tgatgaTTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGttt                                      >  2:415486/1‑150 (MQ=255)

                                                                                                             gatgatTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTc                                     >  2:3255129/1‑150 (MQ=255)

                                                                                                              atgatTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCt                                    <  2:2254594/150‑1 (MQ=255)

                                                                                                              atgatTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCt                                    <  2:524707/150‑1 (MQ=255)

                                                                                                              atgatTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCt                                    <  2:1443891/150‑1 (MQ=255)

                                                                                                               tgatTTCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTa                                   >  2:1971155/1‑150 (MQ=255)

                                                                                                                  tttCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCa                                <  2:3660479/150‑1 (MQ=255)

                                                                                                                   ttCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAg                               >  1:1464740/1‑150 (MQ=255)

                                                                                                                    tCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGc                              >  2:3212940/1‑150 (MQ=255)

                                                                                                                    tCATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGc                              <  1:1079527/150‑1 (MQ=255)

                                                                                                                     cATAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCt                             >  2:1652151/1‑150 (MQ=255)

                                                                                                                      aTAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTg                            >  1:1103779/1‑150 (MQ=255)

                                                                                                                      aTAAACCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTg                            >  1:2950301/1‑150 (MQ=255)

                                                                                                                         aaCCCTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTcc                         >  2:3292422/1‑150 (MQ=255)

                                                                                                                            tcTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCAAACTTAATGATTTAGTGTATGATTGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCcctc                      <  1:2676053/149‑1 (MQ=255)

                                                                                                                            ccTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCcctc                      >  2:1058786/1‑150 (MQ=255)

                                                                                                                             cTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCcctcc                     <  2:1832635/150‑1 (MQ=255)

                                                                                                                             cTGATCTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCcctcc                     <  2:3725839/150‑1 (MQ=255)

                                                                                                                                  cTACAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTc                <  1:556763/150‑1 (MQ=255)

                                                                                                                                    aCAAGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAg              <  2:185918/150‑1 (MQ=255)

                                                                                                                                      aaGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCt            >  2:2613579/1‑150 (MQ=255)

                                                                                                                                      aaGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCt            >  2:2613475/1‑150 (MQ=255)

                                                                                                                                       aGAACGGTTAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTa           <  1:2702668/150‑1 (MQ=255)

                                                                                                                                               tAGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACggg   <  1:2556603/150‑1 (MQ=255)

                                                                                                                                                aGTTATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACgggg  >  2:1298465/1‑150 (MQ=255)

AAGAGCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGG  >  CP009273/3576598‑3576891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`