Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 3,577,827 A→G intergenic (+158/‑292) yrhA → / → yrhB pseudogene, interrupted by IS1E/stable heat shock chaperone

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,577,8270AG100.0% 881.3 / NA 222intergenic (+158/‑292)yrhA/yrhBpseudogene, interrupted by IS1E/stable heat shock chaperone
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (105/117);  total (105/117)

Only 100 of 222 total aligned reads displayed.

GAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTATTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCATAAAATATTAGCAGAT  >  CP009273/3577680‑3577973
                                                                                                                                                   |                                                                                                                                                  
gAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCCCTGtt                                                                                                                                                  <  1:1312447/150‑1 (MQ=255)
 aaaCAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGttt                                                                                                                                                 <  2:1566580/150‑1 (MQ=255)
     aaaaaTCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGc                                                                                                                                             <  2:529376/150‑1 (MQ=255)
     aaaaaTCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCCTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGc                                                                                                                                             >  1:3231083/1‑150 (MQ=255)
       aaaTCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCg                                                                                                                                           >  2:2768380/1‑150 (MQ=255)
        aaTCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGa                                                                                                                                          <  1:2694329/150‑1 (MQ=255)
           cATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAAt                                                                                                                                       >  1:3722090/1‑150 (MQ=255)
            aTTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATa                                                                                                                                      >  2:2735387/1‑150 (MQ=255)
              tGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGc                                                                                                                                    <  1:1265484/150‑1 (MQ=255)
              tGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGc                                                                                                                                    >  2:3716880/1‑150 (MQ=255)
                  aaCCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAAt                                                                                                                                >  1:2750500/1‑150 (MQ=255)
                  aaCCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAAt                                                                                                                                <  1:3398039/150‑1 (MQ=255)
                     cATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGc                                                                                                                             >  2:1872369/1‑150 (MQ=255)
                       tGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTa                                                                                                                           <  1:550545/150‑1 (MQ=255)
                        gCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTat                                                                                                                          <  2:748209/150‑1 (MQ=255)
                          cATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTatga                                                                                                                        >  1:833303/1‑150 (MQ=255)
                          cATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTatga                                                                                                                        >  2:1082938/1‑150 (MQ=255)
                          cATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTatga                                                                                                                        >  2:254482/1‑150 (MQ=255)
                           aTCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTatgat                                                                                                                       <  2:3742362/150‑1 (MQ=255)
                              tttttAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATgatgat                                                                                                                    >  2:1615651/1‑150 (MQ=255)
                              tttttAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATgatgat                                                                                                                    >  2:2653335/1‑150 (MQ=255)
                              tttttAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATgatgat                                                                                                                    >  1:2975482/1‑150 (MQ=255)
                                tttAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGAttt                                                                                                                  <  1:2033755/150‑1 (MQ=255)
                                  tAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTa                                                                                                                >  1:442766/1‑150 (MQ=255)
                                     agaTTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATg                                                                                                             >  1:2438361/1‑150 (MQ=255)
                                     agaTTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATg                                                                                                             <  2:1484417/150‑1 (MQ=255)
                                     agaTTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATg                                                                                                             >  1:3475879/1‑150 (MQ=255)
                                      gaTTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGa                                                                                                            >  2:1783311/1‑150 (MQ=255)
                                         tACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACAt                                                                                                         <  2:1109382/150‑1 (MQ=255)
                                          aCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATg                                                                                                        <  2:3167198/150‑1 (MQ=255)
                                          aCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATg                                                                                                        <  1:1472026/150‑1 (MQ=255)
                                            cagcagAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGtt                                                                                                      >  2:2117818/1‑150 (MQ=255)
                                             agcagAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTg                                                                                                     <  1:639941/150‑1 (MQ=255)
                                             agcagAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTg                                                                                                     <  1:1798060/150‑1 (MQ=255)
                                               cagAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGat                                                                                                   <  2:199387/150‑1 (MQ=255)
                                                agAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGatt                                                                                                  >  1:1306997/1‑150 (MQ=255)
                                                  aaaaTTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGattta                                                                                                <  1:3677281/150‑1 (MQ=255)
                                                   aaaTTCCTTGTTCGAAATTTAGCAGTGCTAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGatttat                                                                                               <  1:290229/150‑1 (MQ=255)
                                                    aaTTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGatttatt                                                                                              <  2:1684171/150‑1 (MQ=255)
                                                        ccTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGa                                                                                          >  2:1234585/1‑150 (MQ=255)
                                                          ttGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAAt                                                                                        <  1:2224292/150‑1 (MQ=255)
                                                            gTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAAttt                                                                                      >  2:3484635/1‑150 (MQ=255)
                                                              tCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTa                                                                                    <  2:2807925/150‑1 (MQ=255)
                                                               cGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTAc                                                                                   >  1:2201933/1‑150 (MQ=255)
                                                                gAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTAcc                                                                                  <  1:471542/150‑1 (MQ=255)
                                                                 aaaTTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTAccc                                                                                 <  1:1899500/150‑1 (MQ=255)
                                                                 aaaTTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTAccc                                                                                 <  2:801427/150‑1 (MQ=255)
                                                                     ttAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAAt                                                                             <  1:1785631/150‑1 (MQ=255)
                                                                       aGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCa                                                                           <  2:534497/150‑1 (MQ=255)
                                                                       aGCAGTCCAAGCCATGGAAAAACGCACCCCGGAACTACACTCCTTCAGCGAGCAGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCa                                                                           <  2:2531520/150‑1 (MQ=255)
                                                                         cAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATa                                                                         <  2:100643/150‑1 (MQ=255)
                                                                          aGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATaa                                                                        >  2:2822844/1‑150 (MQ=255)
                                                                              cAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATa                                                                                                                                      >  1:3282723/1‑84 (MQ=255)
                                                                                 gCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTg                                                                 <  2:1449880/150‑1 (MQ=255)
                                                                                   tATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGat                                                               <  1:1006057/150‑1 (MQ=255)
                                                                                      ggAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATc                                                            <  1:3247303/150‑1 (MQ=255)
                                                                                      ggAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATc                                                            >  2:1643132/1‑150 (MQ=255)
                                                                                       gAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCt                                                           >  2:1836676/1‑150 (MQ=255)
                                                                                       gAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCt                                                           >  2:3638093/1‑150 (MQ=255)
                                                                                        aaaaaCTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCtt                                                          <  2:1417087/150‑1 (MQ=255)
                                                                                        aaaaaCTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCtt                                                          >  2:497483/1‑150 (MQ=255)
                                                                                        aaaaaCTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCtt                                                          >  1:1649763/1‑150 (MQ=255)
                                                                                         aaaaCTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTa                                                         <  1:309222/150‑1 (MQ=255)
                                                                                          aaaCTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTaa                                                        <  2:979843/150‑1 (MQ=255)
                                                                                           aaCTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTaaa                                                       <  1:3524185/150‑1 (MQ=255)
                                                                                           aaCTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTaaa                                                       >  1:3165544/1‑150 (MQ=255)
                                                                                            aCTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAAt                                                      >  1:1601346/1‑150 (MQ=255)
                                                                                            aCTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAAt                                                      >  1:1747751/1‑150 (MQ=255)
                                                                                             cTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATa                                                     <  1:507538/150‑1 (MQ=255)
                                                                                               tACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAg                                                   <  1:1139028/150‑1 (MQ=255)
                                                                                                 cAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGaa                                                 >  2:753735/1‑150 (MQ=255)
                                                                                                  aaCGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGaaa                                                <  2:1904854/150‑1 (MQ=255)
                                                                                                   aCGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGaaaa                                               <  2:1881760/150‑1 (MQ=255)
                                                                                                     ggAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATc                                             <  1:3368274/150‑1 (MQ=255)
                                                                                                     ggAACTACACTCCTTAAGTGAGATGGACCGAAGACATGGAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATc                                             <  2:2394088/150‑1 (MQ=255)
                                                                                                           acacTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTc                                       <  1:2067364/150‑1 (MQ=255)
                                                                                                           acacTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTc                                       >  1:2762626/1‑150 (MQ=255)
                                                                                                             acTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGa                                     >  1:2322116/1‑150 (MQ=255)
                                                                                                             acTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGa                                     >  2:2785209/1‑150 (MQ=255)
                                                                                                              cTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGAc                                    >  1:2874555/1‑150 (MQ=255)
                                                                                                                 cTTAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTCTGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGtt                                 >  2:1428090/1‑150 (MQ=255)
                                                                                                                  ttAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTc                                >  2:412585/1‑150 (MQ=255)
                                                                                                                  ttAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTc                                <  1:1038564/150‑1 (MQ=255)
                                                                                                                   tAAGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCt                               <  2:2348751/150‑1 (MQ=255)
                                                                                                                    aaGTGAGATGGACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTg                              >  1:663827/1‑150 (MQ=255)
                                                                                                                             ggACCGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGaaa                     <  2:2043787/150‑1 (MQ=255)
                                                                                                                                ccGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCa                  >  1:2346416/1‑150 (MQ=255)
                                                                                                                                ccGAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCa                  <  1:1872369/150‑1 (MQ=255)
                                                                                                                                  gAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCATa                >  2:2967825/1‑150 (MQ=255)
                                                                                                                                  gAAGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCATa                <  1:2822844/150‑1 (MQ=255)
                                                                                                                                   aaGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCATaa               >  2:1061910/1‑150 (MQ=255)
                                                                                                                                    aGACATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCATaaa              <  2:3244463/150‑1 (MQ=255)
                                                                                                                                      aCATGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCATAAAat            <  2:1736350/150‑1 (MQ=255)
                                                                                                                                        aTGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCATAAAatat          <  1:1988701/150‑1 (MQ=255)
                                                                                                                                        aTGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCATAAAatat          <  1:1514069/150‑1 (MQ=255)
                                                                                                                                         tGTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCATAAAATAtt         <  1:2653335/150‑1 (MQ=255)
                                                                                                                                          gTAGTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCATAAAATATTa        >  2:3086474/1‑150 (MQ=255)
                                                                                                                                             gTCTCTGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCATAAAATATTAGCa     >  2:2884635/1‑150 (MQ=255)
                                                                                                                                                tctGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCATAAAATATTAGCAGAt  <  1:1284745/150‑1 (MQ=255)
                                                                                                                                                tctGTTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCATAAAATATTAGCAGAt  >  2:3782423/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGTAGTCTCTATTTTAGCCGAAATAGCTAATGGCTATGATGATTTTAATGACATGTTGATTTATTTAGAATTTTACCCGAATCATAAGATTCTGATATCTTAAATAAGAAAATCCCGTTCGACGTTCTGAAAAAGAAATCATAAAATATTAGCAGAT  >  CP009273/3577680‑3577973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑