| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 3,667,959 | C→A | intergenic (+224/‑187) | yhjD → / → yhjE | inner membrane putative BrbK family alternate lipid exporter/MFS superfamily sugar transport 1 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,667,959 | 0 | C | A | 99.5% | 635.4 / NA | 197 | intergenic (+224/‑187) | yhjD/yhjE | inner membrane putative BrbK family alternate lipid exporter/MFS superfamily sugar transport 1 family protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (91/104); minor base T (1/0); total (92/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 197 total aligned reads displayed.
TGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAACCTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGC > CP009273/3667813‑3668105 | tGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTg < 1:2721060/150‑1 (MQ=255)tGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTg > 2:2776521/1‑150 (MQ=255) gcgcCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGa < 1:2303617/150‑1 (MQ=255) cAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAAcc < 2:1428773/150‑1 (MQ=255) cAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAAcc > 2:583371/1‑150 (MQ=255) aGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCa > 1:1165585/1‑150 (MQ=255) catcgcatcCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGt < 2:1348503/150‑1 (MQ=255) atcgcatcCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGtt < 2:3247645/150‑1 (MQ=255) cgcatcCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGtttt < 1:16740/150‑1 (MQ=255) gcatcCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTa > 1:3012537/1‑150 (MQ=255) catcCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTAt > 2:299265/1‑150 (MQ=255) catcCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTAt < 2:1045879/150‑1 (MQ=255) atcCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATc > 1:1510774/1‑150 (MQ=255) atcCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATc > 1:1510244/1‑150 (MQ=255) cGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCAc < 1:3688449/150‑1 (MQ=255) ggCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACt < 2:2014503/150‑1 (MQ=255) tataATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTAtt < 1:3771897/150‑1 (MQ=255) aTGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTtata > 2:1804334/1‑150 (MQ=255) tGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATaa < 2:2631439/150‑1 (MQ=255) acaTAACCTCTTGAAACTCGTCCTCAGAGCCTCTTCAGACATCTTTTTGGGAGCAAACAATTTCAGTCCAACTCATAACCCCAGCATATAAATACAGTTGTTAACTTTTATTTAAAATGAAACCAGTTTTATCCACTATTTATAAAATTa < 1:1036562/150‑1 (MQ=255) acaTAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTa < 1:1034441/150‑1 (MQ=255) caTAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTAt < 2:2875956/150‑1 (MQ=255) caTAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTAt < 2:453048/150‑1 (MQ=255) aaCCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTAtgtg < 2:365659/150‑1 (MQ=255) ccTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGaa < 2:2007541/150‑1 (MQ=255) ttGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCAt < 1:886773/150‑1 (MQ=255) cTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATa > 1:2016037/1‑150 (MQ=255) cTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATa > 2:539554/1‑150 (MQ=255) tCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATag < 1:393235/150‑1 (MQ=255) tCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATagaag > 2:2701572/1‑150 (MQ=255) tCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATagaag > 2:109201/1‑150 (MQ=255) cAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGaaaa < 1:2590345/150‑1 (MQ=255) agagCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGaaaaa > 1:2054237/1‑150 (MQ=255) agagCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGaaaaa > 1:539222/1‑150 (MQ=255) gagCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAAt > 2:1958092/1‑150 (MQ=255) gagCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAAt < 2:1466438/150‑1 (MQ=255) agCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATc > 1:1871904/1‑150 (MQ=255) agCCTCTTCAGCCATCTATTTGGGAGAAAACAATTTCATTCCAACTAATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAAACAGTTATATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAATTc > 1:2710384/1‑150 (MQ=255) tctTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTg < 2:2327390/150‑1 (MQ=255) tctTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTg > 1:1711441/1‑150 (MQ=255) ctTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTgg > 1:2253646/1‑150 (MQ=255) tCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGcc < 1:2609833/150‑1 (MQ=255) cAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCt > 1:594585/1‑150 (MQ=255) cAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCt < 1:1192809/150‑1 (MQ=255) aGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTa < 2:1783073/150‑1 (MQ=255) ccATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTaaa > 1:2374795/1‑150 (MQ=255) ccATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTaaa < 2:3533373/150‑1 (MQ=255) cATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAAc > 2:2976637/1‑150 (MQ=255) cATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAAc > 2:1631297/1‑150 (MQ=255) tCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACAt < 1:1531798/150‑1 (MQ=255) cTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACAtt > 2:2072446/1‑150 (MQ=255) aTTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTAt > 1:2006780/1‑150 (MQ=255) aTTTGGGAGCAAACAACTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTAt < 2:2523124/150‑1 (MQ=255) tttGGGAGCAAACAATGTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATc < 2:2032932/150‑1 (MQ=255) ttGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATcc > 1:3187599/1‑150 (MQ=255) gAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAATCTGAAACCAGTTTTATCAACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCtt > 2:470801/1‑150 (MQ=255) cAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCttttt > 2:1184155/1‑150 (MQ=255) cAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCttttt < 1:2697282/150‑1 (MQ=255) aaaCAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTg < 1:3738226/150‑1 (MQ=255) aaaCAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTg < 2:3014201/150‑1 (MQ=255) aaaCAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTg < 2:3568773/150‑1 (MQ=255) aaaCAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTg > 2:2051535/1‑150 (MQ=255) aaaCAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTg < 2:715824/150‑1 (MQ=255) aaTTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTg > 2:250102/1‑150 (MQ=255) aaTTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTg < 1:2042679/150‑1 (MQ=255) aaTTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTg > 1:2648243/1‑150 (MQ=255) tCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGAttt > 1:3661497/1‑150 (MQ=255) cATTCCAACTCATAACCCCAGCATATAAATCCAGCTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGAtttt < 2:3793131/150‑1 (MQ=255) aTTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGAttttt < 1:1283982/150‑1 (MQ=255) ttCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTg < 1:372211/150‑1 (MQ=255) ttCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTg < 2:2183354/150‑1 (MQ=255) ttCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTg < 1:2776987/150‑1 (MQ=255) ccAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGAc < 2:3115149/150‑1 (MQ=255) ccAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGAc > 2:827992/1‑150 (MQ=255) ccAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGAc > 1:1932257/1‑150 (MQ=255) cAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGAcc > 1:181912/1‑150 (MQ=255) cTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCAtt < 2:240134/150‑1 (MQ=255) cATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTc > 1:85297/1‑150 (MQ=255) aTAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTcc > 1:3588508/1‑150 (MQ=255) aaCCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCcgc > 1:3792139/1‑150 (MQ=255) cccAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGAt > 2:1718167/1‑150 (MQ=255) ccAGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGAtt > 2:3283916/1‑150 (MQ=255) cAGCCTATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGAttt < 2:3149174/150‑1 (MQ=255) aGCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTg > 1:2559948/1‑150 (MQ=255) gCATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGt < 2:1891833/150‑1 (MQ=255) cATATAAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGtt < 1:2025813/150‑1 (MQ=255) ataAATCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTaca < 2:3439710/150‑1 (MQ=255) aaaTCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTAcaca > 1:737839/1‑150 (MQ=255) aaaTCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTAcaca > 1:858723/1‑150 (MQ=255) aaaTCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCAACTATTTATAAAATTATTTTAAGCATATCATAGAAAAAAAATCACTGGCCTCAACATTCTCCCCATATTCCCTAATATAAGACCAATACCGCGATTTGTAAcaca > 1:858107/1‑150 (MQ=255) tCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTg < 2:1704489/150‑1 (MQ=255) tCCAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTg < 1:2114488/150‑1 (MQ=255) cAGTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGaa > 1:157584/1‑150 (MQ=255) cAGTTGGTAACTTTTAATTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGaa < 2:1504727/150‑1 (MQ=255) gTTGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAat > 2:1283683/1‑150 (MQ=255) tGGTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAatat > 2:2146831/1‑150 (MQ=255) ggTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGTCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATc < 2:3216596/150‑1 (MQ=255) ggTAACTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATc > 2:620589/1‑150 (MQ=255) aCTTTTATTTAAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACtt > 2:80917/1‑150 (MQ=255) tttatttaAACTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTg < 1:466558/150‑1 (MQ=255) | TGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATATAAATCCAGTTGGTAACTTTTATTTAACCTGAAACCAGTTTTATCCACTATTTATAAAATTATGTGAAGCATTTCATAGAAGAAAAATCACTGGCCTAAACATTATCCCCTTTTTGCCTGATTTTTGACCATTTCCGCGATTTGTTACACATTGAAATATCACTTTTGCTGTGC > CP009273/3667813‑3668105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |