Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 3,729,325 C→A T329T (ACC→ACA)  xylR → xylose divergent operon transcriptional activator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,729,3250CA100.0% 740.3 / NA 220T329T (ACC→ACA) xylRxylose divergent operon transcriptional activator
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (103/117);  total (103/117)

Only 100 of 224 total aligned reads displayed.

CTCGCTGACCGATCCCGCCGTTATTCAGGCCATGCATTACATTCGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACCATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAGCATATGACA  >  CP009273/3729178‑3729470
                                                                                                                                                   |                                                                                                                                                 
ctcgctGACCGATCCCGCCGTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGCGAAAcaat                                                                                                                                                 >  2:3747389/1‑150 (MQ=255)
    ctGACCGATCCCGCCGTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAAcaatccat                                                                                                                                             >  1:877212/1‑150 (MQ=255)
     tGACCGATCCCGCCGTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATccatg                                                                                                                                            <  2:2249325/150‑1 (MQ=255)
     tGACCGATCCCGCCGTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATccatg                                                                                                                                            >  1:1641605/1‑150 (MQ=255)
      gACCGATCCCGCCGTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATccatgc                                                                                                                                           >  2:3121759/1‑150 (MQ=255)
         cGATCCCGCCGTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATccatgccat                                                                                                                                        >  1:2565896/1‑150 (MQ=255)
          gATCCCGCCGTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATccatgccatg                                                                                                                                       >  1:3149405/1‑150 (MQ=255)
           aTCCCGCCGTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGa                                                                                                                                      <  2:2848318/150‑1 (MQ=255)
           aTCCCGCCGTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGATTTAAAGAAGAGTTGGGTGAAACAATCCATGCCATGa                                                                                                                                      >  2:515167/1‑150 (MQ=255)
             cccGCCGTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGAtt                                                                                                                                    <  2:69795/150‑1 (MQ=255)
               cgccgTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCa                                                                                                                                  <  1:3479816/150‑1 (MQ=255)
                  cgTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGc                                                                                                                               <  1:1190887/150‑1 (MQ=255)
                  cgTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGc                                                                                                                               <  1:1929789/150‑1 (MQ=255)
                   gTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGcc                                                                                                                              <  1:2635056/150‑1 (MQ=255)
                   gTTATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGcc                                                                                                                              <  1:2702309/150‑1 (MQ=255)
                    ttATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCg                                                                                                                             >  2:73284/1‑150 (MQ=255)
                     tATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCga                                                                                                                            <  2:3340327/150‑1 (MQ=255)
                     tATTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCga                                                                                                                            <  2:3306063/150‑1 (MQ=255)
                      aTTCAGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCgag                                                                                                                           >  1:71097/1‑150 (MQ=255)
                          aGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGc                                                                                                                       <  2:2742008/150‑1 (MQ=255)
                          aGGCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCACTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGc                                                                                                                       >  2:3626841/1‑150 (MQ=255)
                           ggCCATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCt                                                                                                                      <  1:2269128/150‑1 (MQ=255)
                             ccATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTgg                                                                                                                    >  1:1343043/1‑150 (MQ=255)
                              cATGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCATTCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGga                                                                                                                   <  1:1178248/150‑1 (MQ=255)
                               aTGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGgag                                                                                                                  >  2:1956683/1‑150 (MQ=255)
                                tGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGgaga                                                                                                                 >  2:3693925/1‑150 (MQ=255)
                                tGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGgaga                                                                                                                 <  2:639293/150‑1 (MQ=255)
                                tGCATTACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGgaga                                                                                                                 >  2:1616481/1‑150 (MQ=255)
                                  cattacattaGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGaaa                                                                                                               <  1:2772244/150‑1 (MQ=255)
                                     tACATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAgcg                                                                                                            <  1:1916274/150‑1 (MQ=255)
                                      aCATTAGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAgcgc                                                                                                           <  2:856527/150‑1 (MQ=255)
                                            gTACTCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTc                                                                                                     >  2:1389450/1‑150 (MQ=255)
                                             tAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTct                                                                                                    <  1:79135/150‑1 (MQ=255)
                                             tAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTct                                                                                                    >  1:2445008/1‑150 (MQ=255)
                                              aaTCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTctg                                                                                                   >  1:2905918/1‑150 (MQ=255)
                                                  aCGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGa                                                                                               >  2:1834730/1‑150 (MQ=255)
                                                    gCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGAtt                                                                                             <  2:1785182/150‑1 (MQ=255)
                                                    gCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGAtt                                                                                             <  1:523735/150‑1 (MQ=255)
                                                      cTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTc                                                                                           <  1:1835199/150‑1 (MQ=255)
                                                       tGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAACGCGCGCAGTCTGCTGATTTCa                                                                                          >  2:2148402/1‑150 (MQ=255)
                                                              ggATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCt                                                                                   >  1:100772/1‑150 (MQ=255)
                                                               gATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCtt                                                                                  >  2:91338/1‑150 (MQ=255)
                                                                  tAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTc                                                                               <  2:1336966/150‑1 (MQ=255)
                                                                   aaaGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCg                                                                              <  1:2171010/150‑1 (MQ=255)
                                                                      gTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATc                                                                           <  1:3395708/150‑1 (MQ=255)
                                                                       tGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCa                                                                          <  1:1450448/150‑1 (MQ=255)
                                                                       tGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCa                                                                          >  2:3516587/1‑150 (MQ=255)
                                                                        ggATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGTAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCaa                                                                         <  2:76968/150‑1 (MQ=255)
                                                                        ggATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCaa                                                                         >  2:3071070/1‑150 (MQ=255)
                                                                         gATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAAt                                                                        <  1:2366619/150‑1 (MQ=255)
                                                                           tCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATga                                                                      <  2:2512582/150‑1 (MQ=255)
                                                                            cAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAACGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATgag                                                                     >  2:2552152/1‑150 (MQ=255)
                                                                            cAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATgag                                                                     >  1:3444368/1‑150 (MQ=255)
                                                                               gTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACACTCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGata                                                                  >  2:3562159/1‑150 (MQ=255)
                                                                                tACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGatat                                                                 >  1:2782401/1‑150 (MQ=255)
                                                                                 aCTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATc                                                                <  1:956257/150‑1 (MQ=255)
                                                                                 aCTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATc                                                                >  2:1736967/1‑150 (MQ=255)
                                                                                 aCTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATc                                                                <  1:3593381/150‑1 (MQ=255)
                                                                                  cTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCg                                                               <  1:2224325/150‑1 (MQ=255)
                                                                                    ggATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCa                                                             <  2:2609782/150‑1 (MQ=255)
                                                                                    ggATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCa                                                             <  2:703098/150‑1 (MQ=255)
                                                                                    ggATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCa                                                             >  2:458912/1‑150 (MQ=255)
                                                                                        gCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAAtg                                                         <  2:2422726/150‑1 (MQ=255)
                                                                                          ggTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAAtgtg                                                       <  2:3257124/150‑1 (MQ=255)
                                                                                            tCGGGATCTCGCGCTCCACTCTTGAGAAGCGTTTTAAAGCAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCg                                                     <  2:3487675/150‑1 (MQ=255)
                                                                                                 aTCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTAt                                                <  1:425484/150‑1 (MQ=255)
                                                                                                 aTCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTAt                                                >  2:1412358/1‑150 (MQ=255)
                                                                                                  tctcGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATc                                               <  1:1867483/150‑1 (MQ=255)
                                                                                                     cgcgCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCAt                                            >  2:491455/1‑150 (MQ=255)
                                                                                                     cgcgCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCAt                                            <  1:3121759/150‑1 (MQ=255)
                                                                                                      gcgcTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATc                                           <  2:2977482/150‑1 (MQ=255)
                                                                                                        gcTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGc                                         <  2:446507/150‑1 (MQ=255)
                                                                                                             aaTCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCaa                                    >  1:2156651/1‑150 (MQ=255)
                                                                                                             aaTCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCaa                                    >  2:3432937/1‑150 (MQ=255)
                                                                                                             aaTCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCaa                                    >  2:1248662/1‑150 (MQ=255)
                                                                                                              aTCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAat                                   <  1:3516587/150‑1 (MQ=255)
                                                                                                                cTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAatat                                 >  1:2827101/1‑150 (MQ=255)
                                                                                                                cTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAatat                                 >  2:1668609/1‑150 (MQ=255)
                                                                                                                cTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAatat                                 >  1:176407/1‑150 (MQ=255)
                                                                                                                  tGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATAttt                               >  2:2899549/1‑150 (MQ=255)
                                                                                                                    agaAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCt                             <  1:2927078/150‑1 (MQ=255)
                                                                                                                     gaAGCGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTa                            >  2:1417666/1‑150 (MQ=255)
                                                                                                                         cGTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTActct                        >  1:386785/1‑150 (MQ=255)
                                                                                                                          gTTTTAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTg                       <  1:2663577/150‑1 (MQ=255)
                                                                                                                            tttAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGtt                     <  1:3693925/150‑1 (MQ=255)
                                                                                                                            tttAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGtt                     <  1:1298372/150‑1 (MQ=255)
                                                                                                                             ttAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGttt                    <  1:73251/150‑1 (MQ=255)
                                                                                                                             ttAAAGAAGAGGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGttt                    <  2:2293492/150‑1 (MQ=255)
                                                                                                                                    agagGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTaaaaa             >  2:3208543/1‑150 (MQ=255)
                                                                                                                                      agGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAg           <  1:1230386/150‑1 (MQ=255)
                                                                                                                                      agGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAg           >  1:54360/1‑150 (MQ=255)
                                                                                                                                      agGTGGGTGAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAg           >  1:3227408/1‑150 (MQ=255)
                                                                                                                                         tgggtgAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAGCat        <  1:1616481/150‑1 (MQ=255)
                                                                                                                                            gtgAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAGCATATg     <  2:2310097/150‑1 (MQ=255)
                                                                                                                                             tgAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAGCATATGa    <  1:1404123/150‑1 (MQ=255)
                                                                                                                                             tgAAACAATCCATGCCATGAGTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGTTATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAGCATATGa    <  1:3303400/150‑1 (MQ=255)
                                                                                                                                              gAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAGCATATGac   >  2:830927/1‑150 (MQ=255)
                                                                                                                                              gAAACAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAGCATATGac   >  1:950001/1‑150 (MQ=255)
                                                                                                                                               aaaCAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAGCATATGaca  <  2:282541/150‑1 (MQ=255)
                                                                                                                                               aaaCAATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAGCATATGaca  <  2:2192798/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
CTCGCTGACCGATCCCGCCGTTATTCAGGCCATGCATTACATTCGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACCATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAGCATATGACA  >  CP009273/3729178‑3729470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑