Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 290,012 C→T D167N (GAT→AAT)  yagM ← CP4‑6 prophage; uncharacterized protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273290,0120CT100.0% 703.6 / NA 211D167N (GAT→AAT) yagMCP4‑6 prophage; uncharacterized protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (106/105);  total (106/105)

Only 100 of 211 total aligned reads displayed.

TTGACAAGAGTAGAGCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATCGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGTTTTCCAGATTAACGAA  >  CP009273/289865‑290157
                                                                                                                                                   |                                                                                                                                                 
    cAAGAGTAGAGCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAAtt                                                                                                                                             >  2:1860647/1‑150 (MQ=255)
    cAAGAGTAGAGCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAAtt                                                                                                                                             <  2:2115293/150‑1 (MQ=255)
    cAAGAGTAGAGCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAAtt                                                                                                                                             <  1:1449001/150‑1 (MQ=255)
    cAAGAGTAGAGCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAAtt                                                                                                                                             >  1:184053/1‑150 (MQ=255)
     aaGAGTAGAGCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAAttt                                                                                                                                            <  1:2884132/150‑1 (MQ=255)
     aaGAGTAGAGCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAAttt                                                                                                                                            >  1:1365146/1‑150 (MQ=255)
      agagTAGAGCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAAtttt                                                                                                                                           >  2:3019251/1‑150 (MQ=255)
       gagTAGAGCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTc                                                                                                                                          <  2:1680179/150‑1 (MQ=255)
         gTAGAGCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTccc                                                                                                                                        >  2:3511535/1‑150 (MQ=255)
         gTAGAGCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTccc                                                                                                                                        >  2:3593479/1‑150 (MQ=255)
           agagCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCtt                                                                                                                                      <  2:1370090/150‑1 (MQ=255)
           agagCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCtt                                                                                                                                      <  1:2508381/150‑1 (MQ=255)
           agagCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCtt                                                                                                                                      <  1:2026358/150‑1 (MQ=255)
           agagCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCtt                                                                                                                                      >  2:845124/1‑150 (MQ=255)
           agagCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCtt                                                                                                                                      >  2:1456443/1‑150 (MQ=255)
                         aTCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCt                                                                                                                        >  1:3387774/1‑150 (MQ=255)
                            aaaGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTc                                                                                                                     >  1:1941672/1‑150 (MQ=255)
                            aaaGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTc                                                                                                                     >  2:554897/1‑150 (MQ=255)
                              aGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCAc                                                                                                                   <  1:2649145/150‑1 (MQ=255)
                                taataaCCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGt                                                                                                                 >  1:724910/1‑150 (MQ=255)
                                taataaCCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGt                                                                                                                 <  2:3311594/150‑1 (MQ=255)
                                taataaCCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTCGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGt                                                                                                                 <  1:274621/150‑1 (MQ=255)
                                 aataaCCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGta                                                                                                                >  1:3591554/1‑150 (MQ=255)
                                 aataaCCCTAAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGta                                                                                                                >  2:3616850/1‑150 (MQ=255)
                                      cccTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACt                                                                                                           <  2:1773261/150‑1 (MQ=255)
                                       ccTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTg                                                                                                          <  2:3561055/150‑1 (MQ=255)
                                       ccTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTg                                                                                                          >  2:2687100/1‑150 (MQ=255)
                                             aGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGtttttt                                                                                                    <  2:3751871/150‑1 (MQ=255)
                                              ggTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTc                                                                                                   >  2:1394720/1‑150 (MQ=255)
                                                 tgttCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATc                                                                                                >  2:2258651/1‑150 (MQ=255)
                                                 tgttCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATc                                                                                                >  1:531324/1‑150 (MQ=255)
                                                  gttCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCt                                                                                               >  1:1087121/1‑150 (MQ=255)
                                                  gttCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCt                                                                                               <  1:491003/150‑1 (MQ=255)
                                                   ttCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCtt                                                                                              >  1:2146241/1‑150 (MQ=255)
                                                    tCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCttt                                                                                             <  1:2539498/150‑1 (MQ=255)
                                                     cTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTc                                                                                            >  1:3275315/1‑150 (MQ=255)
                                                     cTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTc                                                                                            <  1:845124/150‑1 (MQ=255)
                                                       aTGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTccc                                                                                          >  1:1503039/1‑150 (MQ=255)
                                                            taagaataaTGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGa                                                                                     >  1:255273/1‑150 (MQ=255)
                                                            taagaataaTGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGa                                                                                     >  1:254270/1‑150 (MQ=255)
                                                             aagaataaTGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTCTTTCATCTTTCCCCATGaa                                                                                    <  1:2579949/150‑1 (MQ=255)
                                                                 ataatGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATtca                                                                                >  2:1320501/1‑150 (MQ=255)
                                                                    atGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATtcatca                                                                             >  2:19701/1‑150 (MQ=255)
                                                                     tGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTcatcat                                                                            <  1:1555811/150‑1 (MQ=255)
                                                                     tGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTcatcat                                                                            <  2:820303/150‑1 (MQ=255)
                                                                      gTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCAtt                                                                           <  2:531324/150‑1 (MQ=255)
                                                                       tttGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTa                                                                          <  2:31371/150‑1 (MQ=255)
                                                                        ttGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAg                                                                         <  2:1628454/150‑1 (MQ=255)
                                                                         tGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATATTTCCCCATGAATTCATCATTAGc                                                                        <  1:316537/150‑1 (MQ=255)
                                                                          gAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCg                                                                       >  2:183548/1‑150 (MQ=255)
                                                                            atatCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGtt                                                                     >  2:884783/1‑150 (MQ=255)
                                                                              atCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCa                                                                   >  1:3670279/1‑150 (MQ=255)
                                                                              atCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCa                                                                   <  1:672777/150‑1 (MQ=255)
                                                                              atCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCa                                                                   <  2:3526003/150‑1 (MQ=255)
                                                                              atCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCa                                                                   <  2:464861/150‑1 (MQ=255)
                                                                                ccTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGt                                                                 >  2:1003271/1‑150 (MQ=255)
                                                                                ccTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGt                                                                 <  1:1326175/150‑1 (MQ=255)
                                                                                ccTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGt                                                                 <  1:1721559/150‑1 (MQ=255)
                                                                                ccTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGt                                                                 <  1:3616850/150‑1 (MQ=255)
                                                                                  tGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTg                                                               >  1:777975/1‑150 (MQ=255)
                                                                                    agaCACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGaa                                                             >  1:3421865/1‑150 (MQ=255)
                                                                                      acacTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAg                                                           <  2:108155/150‑1 (MQ=255)
                                                                                      acacTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAg                                                           <  2:2979990/150‑1 (MQ=255)
                                                                                      acacTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAg                                                           >  2:2859879/1‑150 (MQ=255)
                                                                                       cacTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGt                                                          <  1:2773054/150‑1 (MQ=255)
                                                                                           ttGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATc                                                      <  2:2100441/150‑1 (MQ=255)
                                                                                               tGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCa                                                  >  1:2519475/1‑150 (MQ=255)
                                                                                                gCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCaa                                                 >  2:7523/1‑150 (MQ=255)
                                                                                                 cTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAAt                                                >  1:2361020/1‑150 (MQ=255)
                                                                                                  tttACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATg                                               <  2:2285163/150‑1 (MQ=255)
                                                                                                  tttACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATg                                               <  1:2876806/150‑1 (MQ=255)
                                                                                                  tttACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATg                                               >  1:947315/1‑150 (MQ=255)
                                                                                                   ttACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATgg                                              <  1:833672/150‑1 (MQ=255)
                                                                                                     aCATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATgggg                                            <  2:2395887/150‑1 (MQ=255)
                                                                                                        tCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGAtt                                         <  1:1130890/150‑1 (MQ=255)
                                                                                                           aaaTGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGAttttt                                      <  2:3387774/150‑1 (MQ=255)
                                                                                                               gTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATg                                  <  2:1561412/150‑1 (MQ=255)
                                                                                                               gTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATg                                  <  1:3019251/150‑1 (MQ=255)
                                                                                                               gTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCCGCAATGGGGATTTTTAATg                                  <  2:2015098/150‑1 (MQ=255)
                                                                                                                tCTTTGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATgg                                 <  1:1406885/150‑1 (MQ=255)
                                                                                                                    tGATTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTc                             >  2:176869/1‑150 (MQ=255)
                                                                                                                      aTTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCat                           >  2:1197263/1‑150 (MQ=255)
                                                                                                                      aTTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCat                           <  2:67594/150‑1 (MQ=255)
                                                                                                                      aTTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCat                           >  2:1441255/1‑150 (MQ=255)
                                                                                                                      aTTGTAAATGTAAATGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCat                           >  1:1628207/1‑150 (MQ=255)
                                                                                                                        tgtaaatgtaaaTGGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCatga                         >  2:1728860/1‑150 (MQ=255)
                                                                                                                                 aaatgGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGttt                <  1:2238671/150‑1 (MQ=255)
                                                                                                                                 aaatgGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGttt                <  1:1624293/150‑1 (MQ=255)
                                                                                                                                 aaatgGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGttt                <  2:2751462/150‑1 (MQ=255)
                                                                                                                                 aaatgGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGttt                >  2:2643844/1‑150 (MQ=255)
                                                                                                                                 aaatgGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGttt                >  1:3546676/1‑150 (MQ=255)
                                                                                                                                  attgGCTTTTTCATTATTGTAATTTTCACTTAGAGTGGATATCCTTTAACGTATAATTGTTTTTTCATCTTTCCCCATGAATTCTTCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATTGACTCATGATGTTCGtttt               <  1:3745354/148‑1 (MQ=255)
                                                                                                                                  aatgGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGtttt               >  1:644465/1‑150 (MQ=255)
                                                                                                                                  aatgGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGtttt               <  2:1117171/150‑1 (MQ=255)
                                                                                                                                  aatgGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCATTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGtttt               >  1:1695492/1‑150 (MQ=255)
                                                                                                                                    tgGCTTTTTCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGTTTTcc             >  1:1231448/1‑150 (MQ=255)
                                                                                                                                        tttttCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGTTTTCCAGAt         >  1:1324783/1‑150 (MQ=255)
                                                                                                                                         ttttCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGTTTTCCAGAtt        <  2:1511446/150‑1 (MQ=255)
                                                                                                                                            tCCATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGTTTTCCAGATTAAc     >  2:1059294/1‑150 (MQ=255)
                                                                                                                                              cATATTGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGTTTTCCAGATTAACGa   >  2:2439744/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
TTGACAAGAGTAGAGCCTGCCCGGCATCAAAGTAATAACCCTCAAAGGTTGTTCTATGAATAAGAATAATGTTTGAATATCCTGAGACACTTTGATGCTTTACATCAAAATGTCTTTGATTGTAAATGTAAATGGCTTTTTCCATATCGTAATTTTCCCTTAGCGAGGATAGCCTTTCACGTATAACTGTTTTTTCATCTTTCCCCATGAATTCATCATTAGCGTTCAGTTGAAAGTAATCTGCAATGGGGATTTTTAATGGACTCATGATGTTCGTTTTCCAGATTAACGAA  >  CP009273/289865‑290157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑