| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 641,886 | C→A | 36.7% | E51* (GAG→TAG) | citT ← | citrate:succinate antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 641,886 | 0 | C | A | 36.7% | 346.2 / 272.4 | 260 | E51* (GAG→TAG) | citT | citrate:succinate antiporter |
| Reads supporting (aligned to +/- strand): ref base C (93/71); new base A (40/56); total (133/127) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.11e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 265 total aligned reads displayed.
GGAAAAACCAGCCAGGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCTTTTGCTAAAGACA > CP009273/641737‑642035 | aaaaCCAGCCAGGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGGAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAg < 1:4445875/150‑1 (MQ=255) aaCCAGCCAGGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTCATTCTTTGGCATCAAAGAGCAGGGACGTACTGCCACTAACGCAAAGAGTCACCGCAATAAAACTGATCGCTGTTGCCGGAAGTGGCTCGAGGa > 1:4991835/1‑150 (MQ=255) aaCCAGCCAGGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGa < 1:4967950/150‑1 (MQ=255) aaCCAGCCAGGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGa < 1:2279471/150‑1 (MQ=255) aaCCAGCCAGGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGa < 1:2279424/150‑1 (MQ=255) aaCCAGCCAGGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGa > 2:1000505/1‑150 (MQ=255) aCCAGCCAGGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGAt < 1:394034/150‑1 (MQ=255) aCCAGCCAGGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGAt > 2:4134571/1‑150 (MQ=255) ccagccagGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATc < 2:3897287/150‑1 (MQ=255) ccagccagGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATc < 2:3892079/150‑1 (MQ=255) ccagGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATAGGCTAGAGGATCATGc > 2:697502/1‑150 (MQ=255) cagGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGcc < 2:2221540/150‑1 (MQ=255) agGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCg > 2:1495053/1‑150 (MQ=255) cATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATc < 1:4686858/150‑1 (MQ=255) cATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGAATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATc < 2:1153257/150‑1 (MQ=255) aTTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCa < 2:1863434/150‑1 (MQ=255) ttCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCAtt < 2:4512146/150‑1 (MQ=255) aGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGcc < 1:1865204/150‑1 (MQ=255) aGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATAATTGcc > 2:2462812/1‑150 (MQ=255) cgcCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCcac > 2:4803399/1‑150 (MQ=255) gcCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCcaca > 2:4358037/1‑150 (MQ=255) tttGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAg > 2:443072/1‑150 (MQ=255) cATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGt > 2:4666256/1‑150 (MQ=255) aTTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTa > 1:682871/1‑150 (MQ=255) ttAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAATCTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTaa < 2:5165634/150‑1 (MQ=255) ttAAACGCTGGGTCAGCTAATTCTTGGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTaa < 1:327245/150‑1 (MQ=255) ttAAACGCTGGGTCAGCTAATTCTTGGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTaa < 2:4258898/150‑1 (MQ=255) cGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAatgcca > 2:796131/1‑150 (MQ=255) ggTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCt > 2:3226711/1‑150 (MQ=255) ggTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCt > 2:5011499/1‑150 (MQ=255) gTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTg < 1:3355634/150‑1 (MQ=255) tCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTgc < 2:1432708/150‑1 (MQ=255) tAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGcggcgg > 1:1970274/1‑150 (MQ=255) aaTTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCggcggc < 1:1598534/150‑1 (MQ=255) tCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATa < 2:3315155/150‑1 (MQ=255) cTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATAc > 1:5213975/1‑150 (MQ=255) tttGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATAcc > 1:2822744/1‑150 (MQ=255) ggCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTc > 1:1002662/1‑150 (MQ=255) ggCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTc > 2:1718810/1‑150 (MQ=255) ggCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTc > 1:3902694/1‑150 (MQ=255) cATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCgg < 1:1904954/150‑1 (MQ=255) cAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGa < 2:5199544/150‑1 (MQ=255) aaaGAGCAGGTAATTACTGCCAATAACGCAACTAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGAc < 1:531450/150‑1 (MQ=255) gagCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCCCTAACACTGCGAAGTAATGCCTTGCCTGCGGCGGCATACCGTCgggggctgg > 2:4964038/1‑145 (MQ=255) gagCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAgg > 1:1267474/1‑150 (MQ=255) gCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGa < 1:74533/150‑1 (MQ=255) cAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGAt < 1:3141008/150‑1 (MQ=255) ggTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATaa < 1:4065513/150‑1 (MQ=255) gTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAATTAATGCCATGCCTGCGGCGGCATACCGTCGTGGACAGGGATAAg > 2:2429747/1‑150 (MQ=255) tAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGa > 2:421011/1‑150 (MQ=255) aaTTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGaa > 1:5075799/1‑150 (MQ=255) aTTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGaaa > 2:5124378/1‑150 (MQ=255) tACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACa > 1:2732456/1‑150 (MQ=255) aCTGCCAATAACGCAACTAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACAt < 1:25524/150‑1 (MQ=255) tGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGa > 1:2070702/1‑150 (MQ=255) gCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGac > 2:495709/1‑150 (MQ=255) gCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGac > 2:2360326/1‑150 (MQ=255) ccAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGaca > 1:2471835/1‑150 (MQ=255) aTAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACAccc < 2:298033/150‑1 (MQ=255) aaCGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCAt > 2:261025/1‑150 (MQ=255) gCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATcac < 2:2099473/150‑1 (MQ=255) gCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATcac > 2:852456/1‑150 (MQ=255) gCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATcac < 2:971684/150‑1 (MQ=255) cAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATcacc > 2:1351413/1‑150 (MQ=255) cAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATcacc > 1:722147/1‑150 (MQ=255) cAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATcacc < 1:3316320/150‑1 (MQ=255) aGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCTTGCCTGCGGCGGCATACCGTAGGGGACAGGGATAAGAAACATGACACCCATCACCACCAg > 2:3189606/1‑150 (MQ=255) aGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAg < 1:4550598/150‑1 (MQ=255) tAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTg > 1:797882/1‑150 (MQ=255) tAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTg < 1:1627403/150‑1 (MQ=255) tAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTg < 1:3725575/150‑1 (MQ=255) aaCCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTgg < 2:1220322/150‑1 (MQ=255) aCCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTggg > 1:3687305/1‑150 (MQ=255) ccGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTgggg < 2:4910942/150‑1 (MQ=255) cGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGc > 1:4751832/1‑150 (MQ=255) cAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCa < 1:1149559/150‑1 (MQ=255) aaTAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCaa > 1:4494609/1‑150 (MQ=255) aaTAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCaa > 1:1142537/1‑150 (MQ=255) aTAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAAt < 2:4429853/150‑1 (MQ=255) aTAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAAt < 2:4625156/150‑1 (MQ=255) aaCTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGtt < 2:734870/150‑1 (MQ=255) aaCTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGtt > 1:3807631/1‑150 (MQ=255) aCTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGttt < 1:661363/150‑1 (MQ=255) cTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTc < 2:5075505/150‑1 (MQ=255) tGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTcc < 2:2007891/150‑1 (MQ=255) aTCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCat > 2:358378/1‑150 (MQ=255) aTCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCat < 1:3182933/150‑1 (MQ=255) cGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCatat > 2:4515414/1‑150 (MQ=255) cGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCatat > 1:4326887/1‑150 (MQ=255) tGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATAtatt < 2:2642001/150‑1 (MQ=255) ttGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATAtattat < 1:1525262/150‑1 (MQ=255) ttGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATAtattat < 1:4134571/150‑1 (MQ=255) tGCCGGAATTGGCTCGTGGATCATGCCGTCTATCATTGGCACAAACACAGCGAAGTAATTACATGCATGAGGCGGCTTAGCGTGGGGGTCAGGGATAAGAAAGATGACACCCATCACGACCATTGGGGCCTATATTTTCCATATATTTTc < 2:3305216/150‑1 (MQ=255) cGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCttt < 2:3277024/150‑1 (MQ=255) cGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCttt > 2:209535/1‑150 (MQ=255) aaTTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCTTTTGc < 1:4666256/150‑1 (MQ=255) aTTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCTTTTGCt > 2:3105383/1‑150 (MQ=255) tGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCTTTTGCTaa < 1:4322043/150‑1 (MQ=255) cGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCTTTTGCTAAAGACa > 2:3198969/1‑150 (MQ=255) cGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCTTTTGCTAAAGACa > 2:2130098/1‑150 (MQ=255) | GGAAAAACCAGCCAGGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCTTTTGCTAAAGACA > CP009273/641737‑642035 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |