Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,010,932 A→G 5.4% intergenic (+17/‑239) pqiC → / → rmf DUF330 family putative lipoprotein/ribosome modulation factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,010,9320AG 5.4% 960.7 / 30.0 279intergenic (+17/‑239)pqiC/rmfDUF330 family putative lipoprotein/ribosome modulation factor
Reads supporting (aligned to +/- strand):  ref base A (140/124);  new base G (2/13);  total (142/137)
Fisher's exact test for biased strand distribution p-value = 2.87e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 291 total aligned reads displayed.

ACTGATCAAACGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAATTTTGCGCATTGACGGCAGT  >  CP009273/1010783‑1011081
                                                                                                                                                     |                                                                                                                                                     
aCTGATCAAACGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTaaa                                                                                                                                                       <  2:4045593/150‑1 (MQ=255)
   gATCAAACGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAatat                                                                                                                                                    <  1:877908/150‑1 (MQ=255)
      cAAACGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAAc                                                                                                                                                 >  1:3856383/1‑150 (MQ=255)
      cAAACGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAAc                                                                                                                                                 >  1:2884551/1‑150 (MQ=255)
       aaaCGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAAcc                                                                                                                                                >  2:465640/1‑150 (MQ=255)
       aaaCGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAAcc                                                                                                                                                >  1:1963519/1‑150 (MQ=255)
       aaaCGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAAcc                                                                                                                                                >  2:2034868/1‑150 (MQ=255)
        aaCGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCg                                                                                                                                               <  1:1311446/150‑1 (MQ=255)
        aaCGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCg                                                                                                                                               <  1:1400174/150‑1 (MQ=255)
        aaCGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCg                                                                                                                                               <  2:364996/150‑1 (MQ=255)
         aCGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGt                                                                                                                                              <  2:2627242/150‑1 (MQ=255)
           gTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGtct                                                                                                                                            >  2:1711546/1‑150 (MQ=255)
            tccgttccgtCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGtctc                                                                                                                                           <  1:2746957/150‑1 (MQ=255)
             ccgttccgtCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTcc                                                                                                                                          <  2:5002498/150‑1 (MQ=255)
             ccggtccgtCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTcc                                                                                                                                          <  2:2912934/150‑1 (MQ=255)
              cgttccgtCTGGAAGGAGTGCAAACTCATGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCg                                                                                                                                         <  2:3109421/150‑1 (MQ=255)
               gttccgtCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCgg                                                                                                                                        >  1:5193018/1‑150 (MQ=255)
               gttccgtCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGACTACCTTAATTATAAAGATTTGTCAATATAACCGTCTCCgg                                                                                                                                        >  2:4022449/1‑150 (MQ=255)
                ttccgtCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTGAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGt                                                                                                                                       <  1:4479095/150‑1 (MQ=255)
                    gtCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGt                                                                                                                                   >  2:2304651/1‑150 (MQ=255)
                    gtCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGt                                                                                                                                   >  2:4637136/1‑150 (MQ=255)
                      cTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTTCGGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTg                                                                                                                                 <  2:2484569/150‑1 (MQ=255)
                        tgAAGGATTGCATTCTCAGGATGGTTACGATGATATGGTTTAAGTGCTGGCCGGTGTCGGGAGTCAGGAAGCCGCTTCTATTGCACATGATAGAAATCGTCTACCTTAATTATAAAGATTTGTAAATATTACCGTCTCCGGTATGTTGcc                                                                                                                               <  1:5154333/149‑1 (MQ=255)
                        ggAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGcc                                                                                                                               >  1:2559650/1‑150 (MQ=255)
                        ggAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGcc                                                                                                                               <  2:3580479/150‑1 (MQ=255)
                          aaGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTCCCTTAATTATAAAGATTTGTCAATATAACCGTCTCCGGTATGTTGCCTg                                                                                                                             >  2:3176601/1‑150 (MQ=255)
                          aaGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTg                                                                                                                             >  2:1160199/1‑150 (MQ=255)
                            ggAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAg                                                                                                                           <  1:824173/150‑1 (MQ=255)
                                    aaCTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGtttt                                                                                                                   <  2:1816098/150‑1 (MQ=255)
                                     aCTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGttttt                                                                                                                  >  2:858856/1‑150 (MQ=255)
                                            aTGGTTACGATGAGCTGGTTCACGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAGGATAACCGTCTCCGGTATGGTGCCTGAGGCGGTTTTTTTGtctc                                                                                                           <  2:4572352/150‑1 (MQ=255)
                                            aTGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGtctc                                                                                                           <  2:3698394/150‑1 (MQ=255)
                                             tGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTctct                                                                                                          <  2:426090/150‑1 (MQ=255)
                                                ttACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAGTATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAAc                                                                                                       <  1:1060600/150‑1 (MQ=255)
                                                ttACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAAc                                                                                                       <  1:2859237/150‑1 (MQ=255)
                                                ttACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAAc                                                                                                       >  2:5087938/1‑150 (MQ=255)
                                                 tACGATGAGATGGTTATAGTGCTTGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACATGAGATAAAGCGTCTACCTTAATTAGAAAGATTTGTAAATATAACCGTGTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACg                                                                                                      <  1:5079153/150‑1 (MQ=255)
                                                 tACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACg                                                                                                      <  2:4580560/150‑1 (MQ=255)
                                                      tGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCgg                                                                                                 <  1:4833812/150‑1 (MQ=255)
                                                       gagaTGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCCGTATGTATCATGAGGCGGTTTTTTTGTCTCTAACGTGCGGa                                                                                                >  2:3197618/1‑150 (MQ=255)
                                                        agaTGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGaa                                                                                               <  1:1527868/150‑1 (MQ=255)
                                                         gaTGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAGTATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGaaa                                                                                              <  1:4542414/150‑1 (MQ=255)
                                                         gaTGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGaaa                                                                                              >  1:4638496/1‑150 (MQ=255)
                                                         gaTGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGaaa                                                                                              >  1:4951363/1‑150 (MQ=255)
                                                          agggTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAAGATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGaaaa                                                                                             <  2:4102159/148‑1 (MQ=255)
                                                           tGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGaaaaa                                                                                            >  2:2393881/1‑150 (MQ=255)
                                                                 aaGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGtt                                                                                      <  2:1661262/150‑1 (MQ=255)
                                                                    tGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCct                                                                                   <  1:769839/150‑1 (MQ=255)
                                                                        ggCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTc                                                                               >  2:4736989/1‑150 (MQ=255)
                                                                        ggCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTc                                                                               >  2:3388088/1‑150 (MQ=255)
                                                                            ggTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACAt                                                                           <  1:2858623/150‑1 (MQ=255)
                                                                               gtCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACAtttt                                                                        <  2:4415807/150‑1 (MQ=255)
                                                                                tCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTACCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACAttttt                                                                       <  2:2787133/150‑1 (MQ=255)
                                                                                 cTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAGTATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACAtttttt                                                                      <  2:5214842/150‑1 (MQ=255)
                                                                                    gAGTCAGGAAGCCGCTTCTATTGCACACGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTa                                                                   <  2:4342266/150‑1 (MQ=255)
                                                                                     aGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTAc                                                                  >  2:197748/1‑150 (MQ=255)
                                                                                        cAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAAc                                                               >  1:2385318/1‑150 (MQ=255)
                                                                                          ggAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTGTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTAAAACCg                                                             >  2:2805475/1‑150 (MQ=255)
                                                                                           gAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGa                                                            <  1:373748/150‑1 (MQ=255)
                                                                                            aaGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGAc                                                           >  1:2120903/1‑150 (MQ=255)
                                                                                              gCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACAt                                                         >  1:5069117/1‑150 (MQ=255)
                                                                                              gCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACAt                                                         >  2:3548183/1‑150 (MQ=255)
                                                                                              gCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACAt                                                         <  1:1845492/150‑1 (MQ=255)
                                                                                               ccGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATg                                                        <  2:1925659/150‑1 (MQ=255)
                                                                                                 gCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGcc                                                      >  1:4091961/1‑150 (MQ=255)
                                                                                                  cTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCACTTCACATTTTTTGTACAACCGACATGccc                                                     <  2:727238/150‑1 (MQ=255)
                                                                                                   ttCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCg                                                    <  2:1628930/150‑1 (MQ=255)
                                                                                                       aTTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTTTACAACCGACATGCCCGTGTa                                                >  2:3863101/1‑150 (MQ=255)
                                                                                                       aTTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTa                                                >  1:1699129/1‑150 (MQ=255)
                                                                                                        ttGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAg                                               <  1:578816/150‑1 (MQ=255)
                                                                                                            acaAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTca                                           >  1:3648767/1‑150 (MQ=255)
                                                                                                             caAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTcac                                          <  2:2965918/150‑1 (MQ=255)
                                                                                                              aaGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTcaca                                         >  1:669350/1‑150 (MQ=255)
                                                                                                                 agaTAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAat                                      <  2:1533764/150‑1 (MQ=255)
                                                                                                                 agaTAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAat                                      <  1:3407433/150‑1 (MQ=255)
                                                                                                                   aTAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCTGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAatat                                    <  2:3244620/150‑1 (MQ=255)
                                                                                                                   aTAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAatat                                    >  1:2989147/1‑150 (MQ=255)
                                                                                                                   aTAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAatat                                    >  1:354402/1‑150 (MQ=255)
                                                                                                                     aaaTCGTCTAACTTTATTATAAAGATTTGTAAATTTAACCTTCTACGGTATGTTTCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGTAAAAATTTGTTCCTCTTCACATTTTTTGTAATACCGTCATGCCCGTGTAGCTCACAAATATGa                                  <  2:1265127/150‑1 (MQ=255)
                                                                                                                      aaGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGAc                                 <  1:3916318/150‑1 (MQ=255)
                                                                                                                           tCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTgg                            <  1:1160199/150‑1 (MQ=255)
                                                                                                                           acgaCCTGAATTATACAGATTTGTAAATCTAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTgg                            <  1:4424903/147‑1 (MQ=255)
                                                                                                                             tACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCg                          <  2:3601807/150‑1 (MQ=255)
                                                                                                                             tACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCg                          <  1:4238165/150‑1 (MQ=255)
                                                                                                                             tACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCg                          >  1:4377829/1‑150 (MQ=255)
                                                                                                                              aCCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGt                         >  2:588990/1‑150 (MQ=255)
                                                                                                                               ccTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTg                        >  1:3459249/1‑150 (MQ=255)
                                                                                                                                   aaTTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAAtt                    <  1:3120580/150‑1 (MQ=255)
                                                                                                                                    aTTATAAAGATTTGTAAGTATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAAttt                   <  2:2514991/150‑1 (MQ=255)
                                                                                                                                      tataAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAATTTTg                 >  1:3171412/1‑150 (MQ=255)
                                                                                                                                       ataAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAATTTTgc                >  1:4499608/1‑150 (MQ=255)
                                                                                                                                        taAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAATTTTgcg               <  1:1745373/150‑1 (MQ=255)
                                                                                                                                         aaaGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGAAATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAATTTTgcgc              >  1:4281952/1‑150 (MQ=255)
                                                                                                                                          aaGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAATTTTGCGCa             >  2:1413232/1‑150 (MQ=255)
                                                                                                                                            gATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAATTTTGCGCAtt           >  1:2005526/1‑150 (MQ=255)
                                                                                                                                              tttGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAATTTTGCGCATTGa         <  1:2216481/150‑1 (MQ=255)
                                                                                                                                               ttGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAATTTTGCGCATTGAc        <  1:2455932/150‑1 (MQ=255)
                                                                                                                                                  tAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAATTTTGCGCATTGACGGc     <  2:5193018/150‑1 (MQ=255)
                                                                                                                                                   aaaTATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAATTTTGCGCATTGACGGCa    >  1:2199138/1‑150 (MQ=255)
                                                                                                                                                   aaaTATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAATTTTGCGCATTGACGGCa    >  1:3358887/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACTGATCAAACGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAATTATAAAGATTTGTAAATATAACCGTCTCCGGTATGTTGCCTGAGGCGGTTTTTTTGTCTCTAACGTGCGGAAAAATTTGTTCCTCTTCACATTTTTTGTACAACCGACATGCCCGTGTAGCTCACAAATATGACAGTGGCGTGAATTTTGCGCATTGACGGCAGT  >  CP009273/1010783‑1011081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: