| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,649,456 | C→T | 19.6% | intergenic (‑58/+148) | rspA ← / ← ynfA | bifunctional D‑altronate/D‑mannonate dehydratase/UPF0060 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,649,456 | 0 | C | T | 19.6% | 635.7 / 137.6 | 261 | intergenic (‑58/+148) | rspA/ynfA | bifunctional D‑altronate/D‑mannonate dehydratase/UPF0060 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (105/104); new base T (20/31); total (126/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 274 total aligned reads displayed.
GGCCCGTAATACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTATGTTCCT > CP009273/1649308‑1649605 | ggCCCTTAATACCTTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAATACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCTTGAAATCTACGCAACTGAGCTACTAcc < 2:37064/150‑1 (MQ=255) gCCCGTAATACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCa > 1:1911647/1‑150 (MQ=255) cccGTAATACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCAt > 1:3285601/1‑150 (MQ=255) ccGTAATACCGTCCTCAGTGGTGATTTTTAATGTGACGACATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCAGCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTCCTACCATa > 2:2288809/1‑150 (MQ=255) cGTAATACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATAc < 1:3146321/150‑1 (MQ=255) aTACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGt < 2:113090/150‑1 (MQ=255) aTACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGt < 2:1804369/150‑1 (MQ=255) aTACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGt < 2:2761818/150‑1 (MQ=255) tACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGta > 2:2522124/1‑150 (MQ=255) aCCGTCCTCAGTGGTGATTTTTAATGTGACGTAATTACGCCCCGGACAGGTAACAAAATCTTCAGCCTTTACGATCTTCTTGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGtat < 1:5206687/150‑1 (MQ=255) cgaccTCAGTGGTCATTTTTAATGTGACGAAATAACGCCCCGGACAGGTAACAAAAACTTCAGCCTGTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATaa < 2:3091281/147‑1 (MQ=255) cGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAACAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCATCTGAGCTACTACCATACAAGTATaa < 2:1691340/150‑1 (MQ=255) tCCTCAGTGGTGTTTATTAATGTGACGAAATTACGACCCGGACATGTAAAATAAACTTCAGCCTTTACTATCTTTATGTTCGATTCCTTGCATCGCTTGTAGTGATGCATGATATCTACGCAACTGAGCTTCTACCATACTATTATTAAg < 2:4358885/150‑1 (MQ=255) tCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAg < 1:745883/150‑1 (MQ=255) cTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGAt < 1:859186/150‑1 (MQ=255) aGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTAACATACAAGTATAAAGATCGa > 2:5194608/1‑150 (MQ=255) gtgATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGaaaaa < 2:3685855/150‑1 (MQ=255) gtgATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGaaaaa < 2:739384/150‑1 (MQ=255) gtgATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGATTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGaaaaa < 1:904651/150‑1 (MQ=255) gATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAg < 1:2061682/150‑1 (MQ=255) tttttAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGcc > 1:2665272/1‑150 (MQ=255) ttttAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCg < 1:3568573/150‑1 (MQ=255) tttAATGTGACGAAATTACGCCCCGGAAAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCgg < 2:2859180/150‑1 (MQ=255) aaTGTGACGAAATTACGCCACGGACAGTTAACAACTACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGt < 2:3173330/150‑1 (MQ=255) cGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATcac‑a > 2:586145/1‑150 (MQ=255) gAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑aa > 1:895391/1‑150 (MQ=255) aaTTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATAAC‑aaaa > 1:609302/1‑150 (MQ=255) aTTACGCCCAGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑aaaaa < 2:2200167/150‑1 (MQ=255) cGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAgg > 2:91004/1‑150 (MQ=255) ccccGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTTCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCg > 1:1951816/1‑150 (MQ=255) ccccGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCg < 2:3006698/150‑1 (MQ=255) ccGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGta < 1:1291199/150‑1 (MQ=255) cGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATTAAATCTACGCAACTGATCTACTACCATACAAGTATTAAGATCGAAAAAAGCCGGTGTGATCAC‑AAAAAAAGGCGtat < 2:132397/150‑1 (MQ=255) cGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGtat < 1:1338570/150‑1 (MQ=255) ggACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGtata > 1:4317337/1‑150 (MQ=255) ggACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGtata < 1:2239667/150‑1 (MQ=255) ggACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGtata < 1:2179928/150‑1 (MQ=255) ggACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTACTTGCATCGCTTGTAGTGATTCATGAAATCTACGCAAATGAGCTAATACCATACAATTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGtata > 2:1941649/1‑150 (MQ=255) gACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTatat < 2:4658880/150‑1 (MQ=255) aCAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGtagagt > 2:1122065/1‑146 (MQ=255) aCAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATAtt < 1:2372854/150‑1 (MQ=255) aCAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATAtt < 1:4399172/150‑1 (MQ=255) cAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATAttt > 2:1181114/1‑150 (MQ=255) gTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGGATATTTgcg > 2:2113349/1‑150 (MQ=255) tAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTgcgc > 2:3856924/1‑150 (MQ=255) aaaaaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCtgtg < 2:4170433/150‑1 (MQ=255) aaaaaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAATATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAATGGCGTATATTTGCGCtgtg > 1:3094940/1‑150 (MQ=255) aaaaaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTNGCANCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAATATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCtgtg > 1:1335760/1‑150 (MQ=255) aaaaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGa > 1:3462582/1‑150 (MQ=255) aaaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGaa > 1:1024673/1‑150 (MQ=255) aaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAAt < 1:2833528/150‑1 (MQ=255) aaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAAt > 1:646993/1‑150 (MQ=255) tCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGtt < 1:1702768/150‑1 (MQ=255) cAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTg > 1:3742864/1‑150 (MQ=255) aGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGa < 1:147382/150‑1 (MQ=255) aGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGAGTATATTTGCGCTGTGAATGGTTGa > 2:3567145/1‑150 (MQ=255) ccTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACa > 1:3995804/1‑150 (MQ=255) cTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACaa > 2:4429836/1‑150 (MQ=255) cTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACaa > 1:1634749/1‑150 (MQ=255) cTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACaa > 1:1634931/1‑150 (MQ=255) tttACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACaaa < 1:4001464/150‑1 (MQ=255) tttACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACaaa > 1:1917439/1‑150 (MQ=255) gATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATg > 1:2885516/1‑150 (MQ=255) ttCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAAt > 2:3757063/1‑150 (MQ=255) tCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATa < 1:5149159/150‑1 (MQ=255) tGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGaa < 2:4862472/150‑1 (MQ=255) gTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAAt > 2:3997706/1‑150 (MQ=255) tCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATAc < 1:501321/150‑1 (MQ=255) tCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATAc < 1:5127992/150‑1 (MQ=255) cGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATAcc > 2:5122413/1‑150 (MQ=255) tGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCa > 1:4331059/1‑150 (MQ=255) gCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTTTCAg > 2:2070515/1‑150 (MQ=255) gCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTAAg > 2:1826158/1‑150 (MQ=255) aTCGCTTGTCTTTATGCATGAAATCTACGCAACTGAGCTAATATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGAAAAAAGATGAAATAGAATACCTTTTGTCAGCt < 1:4095660/150‑1 (MQ=255) tCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTg < 2:3878077/150‑1 (MQ=255) gCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGac > 2:2665680/1‑150 (MQ=255) tGTCGTGATGCATGAAATCTACGCAAATGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACt < 1:4071946/150‑1 (MQ=255) tGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCctc > 2:4345492/1‑150 (MQ=255) gATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCctct < 1:3190905/150‑1 (MQ=255) gATGCATGAAATCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCctct < 1:3854661/150‑1 (MQ=255) gATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCctct > 1:4891717/1‑150 (MQ=255) cATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCtcttatc < 1:4692432/150‑1 (MQ=255) tGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCtcttatctt < 1:684555/150‑1 (MQ=255) aaaTCTACGCAACTGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTcttatcttat < 1:2484481/150‑1 (MQ=255) aaaTCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTcttatcttat > 1:3480311/1‑150 (MQ=255) aaTCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTAtt > 1:2135030/1‑150 (MQ=255) aaTCCACGCAACTGAGCTACTACCATACAAGGATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTAtt > 1:1085065/1‑150 (MQ=255) aTCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTg < 2:1475500/150‑1 (MQ=255) cTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGAt < 1:2933646/150‑1 (MQ=255) aCGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATaa > 1:2392101/1‑150 (MQ=255) cAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAAt > 1:1590055/1‑150 (MQ=255) aaCTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATg > 2:769120/1‑150 (MQ=255) aCTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATgg < 2:1029842/150‑1 (MQ=255) tGAGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGAt > 1:722391/1‑150 (MQ=255) gAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCACAAAAAAAAGGCGAATATTTGCGCTGTGAATGGTTTAAAAAAGATTAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGAt > 2:4373247/1‑150 (MQ=255) aGCTACTATCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGAttt < 2:617023/150‑1 (MQ=255) gCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTa < 1:1721502/150‑1 (MQ=255) ctactaCCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGatatat > 2:2554730/1‑150 (MQ=255) tactatCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATCCCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTATg < 2:27971/150‑1 (MQ=255) actatCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATCCCTTATGTCAGCTGACACTTCATCGTATCTGATTGATTAGATGGATGTAGGt > 2:3243174/1‑150 (MQ=255) | GGCCCGTAATACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCGAAAAAAGCCGGAGTGATCAC‑AAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTATGTTCCT > CP009273/1649308‑1649605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |