| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 170,868 | C→A | 7.3% | V168F (GTT→TTT) | hemL ← | glutamate‑1‑semialdehyde aminotransferase (aminomutase) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 170,868 | 0 | C | A | 7.3% | 1082.9 / 40.9 | 293 | V168F (GTT→TTT) | hemL | glutamate‑1‑semialdehyde aminotransferase (aminomutase) |
| Reads supporting (aligned to +/- strand): ref base C (126/145); new base A (9/13); total (135/158) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 297 total aligned reads displayed.
GGCAGCGGCGGAACACAGTTCATATTGCCTGCCACCGGCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAGGCGGATGGCGCTCATGGTCG > CP009273/170720‑171017 | aGCGGCGGAACACAGTTCATATTGCCTGCCACCGGCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGccc > 1:1302739/1‑150 (MQ=255) cggcggAACACAGTTCATATTGCCTGCCACCGGCTCGTCGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCgg < 2:3171022/150‑1 (MQ=255) ggcggAACACAGTTCATATTGCCTGCCACCGGCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGc < 2:3035952/150‑1 (MQ=255) gAACACAGTTCATATTGCCTGCCACCGGCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGt > 1:3229738/1‑150 (MQ=255) aaCACAGTTCATATTGCCTGCCACCGGCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGtt > 2:1513622/1‑150 (MQ=255) atatTGCCTGCCACCGGCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCt < 2:4063552/150‑1 (MQ=255) ttGCCTGCCACCGGCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAAc < 2:856942/150‑1 (MQ=255) ccACCGGCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGTTCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTg > 2:1560043/1‑150 (MQ=255) ccACCGGCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTg > 2:3846771/1‑150 (MQ=255) ccGGCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTgcgc < 2:696459/150‑1 (MQ=255) ccGGCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTgcgc > 1:1573962/1‑150 (MQ=255) cGGCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGcc < 1:4623913/150‑1 (MQ=255) ggCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCa < 1:860093/150‑1 (MQ=255) ggCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCa < 2:1644224/150‑1 (MQ=255) cTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGa > 2:1941017/1‑150 (MQ=255) gacgaTAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAAcc < 1:2126528/150‑1 (MQ=255) gaTAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGc > 1:4699350/1‑150 (MQ=255) ataataCAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCt < 1:5115335/150‑1 (MQ=255) ataataCAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAAAGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCt > 2:621014/1‑150 (MQ=255) taataCAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCtt < 2:1195517/150‑1 (MQ=255) aataCAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCttt < 2:4199128/150‑1 (MQ=255) ataCAGGCAATCTCTTGCGGTTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAATGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGACTAACGTGAGTGCGCCAGAACCGGCTTTc < 1:4780831/150‑1 (MQ=255) ataCAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTc > 2:2778851/1‑150 (MQ=255) taCAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCa < 1:3674705/150‑1 (MQ=255) cAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCAcc < 2:4454256/150‑1 (MQ=255) aGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACca < 1:261821/150‑1 (MQ=255) cAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCCGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGATGGCCTAACGTGAGTGCTCCAGAACCGGCTTTCACcagca > 1:21739/1‑150 (MQ=255) aaTCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACcagcag < 1:4585899/150‑1 (MQ=255) ctctTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGTGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAgcaggca < 1:3335165/150‑1 (MQ=255) ctctTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAgcaggca < 1:3613290/150‑1 (MQ=255) tctTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAgcaggcag < 2:240139/150‑1 (MQ=255) tctTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAgcaggcag < 2:924643/150‑1 (MQ=255) ctTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGt > 1:249584/1‑150 (MQ=255) tGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCa < 2:1451395/150‑1 (MQ=255) tGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCa < 2:1232504/150‑1 (MQ=255) cGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGc > 2:4295678/1‑150 (MQ=255) gTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTg > 1:1006022/1‑150 (MQ=255) gTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTg > 2:1035485/1‑150 (MQ=255) aTTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGAc > 2:3397652/1‑150 (MQ=255) tgataaaaTGCTGCTCTTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGATGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCa < 2:4127848/145‑1 (MQ=255) gCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCAt < 1:1015653/150‑1 (MQ=255) cTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATg < 1:422105/150‑1 (MQ=255) aaaTGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTa < 2:4804785/150‑1 (MQ=255) tGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAaca > 2:2120222/1‑150 (MQ=255) cgcgTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCTAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCtt < 1:2548060/150‑1 (MQ=255) gTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCaa > 1:912772/1‑150 (MQ=255) tACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCaaa < 1:2989730/150‑1 (MQ=255) cAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAAtt > 2:4397126/1‑150 (MQ=255) aGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAAttt > 2:274493/1‑150 (MQ=255) aGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAAttt < 2:2622524/150‑1 (MQ=255) gAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCCGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTta > 2:914626/1‑150 (MQ=255) aGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTtaat < 1:396591/150‑1 (MQ=255) aGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTtaat > 2:4596955/1‑150 (MQ=255) gCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTtaatc > 2:1050459/1‑149 (MQ=255) cAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTaataat > 1:2059865/1‑150 (MQ=255) cAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTaataat < 1:1156700/150‑1 (MQ=255) gATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAAttt > 1:4162544/1‑150 (MQ=255) gATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTAAATAAttt > 2:3644402/1‑150 (MQ=255) tCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTg < 2:2520881/150‑1 (MQ=255) tCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTg < 1:3461223/150‑1 (MQ=255) cATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGt < 1:5186760/150‑1 (MQ=255) aTTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTc > 2:3094973/1‑150 (MQ=255) ttATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTcg > 1:4988024/1‑150 (MQ=255) taAGTACAGGTTAAGGTATAATTGGCGAAATCTGCCGGAACGCCCGGCGAGTGTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGa < 2:3555270/150‑1 (MQ=255) aGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGAcc < 1:831755/150‑1 (MQ=255) gTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCg > 1:688148/1‑150 (MQ=255) gTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCg > 1:862254/1‑150 (MQ=255) tACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCgg > 2:294826/1‑150 (MQ=255) cAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTa > 2:3441504/1‑150 (MQ=255) cAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTa < 2:4011858/150‑1 (MQ=255) aGGTTAAGGTATATTTTGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGAGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCTACCGGTaa > 1:1945528/1‑150 (MQ=255) aGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTaa < 1:4529420/150‑1 (MQ=255) aGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTaa > 2:3818117/1‑150 (MQ=255) ggTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTaaa < 2:4483945/150‑1 (MQ=255) aaGGTATATTTGGCGAAATCTGCCGGAAAGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCa < 1:120510/150‑1 (MQ=255) aaGGTATATTTGGCGAAATCTGCCGGAAAGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCa < 1:120652/150‑1 (MQ=255) aGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCAc > 2:562105/1‑150 (MQ=255) aGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCAc > 2:5027755/1‑150 (MQ=255) ggTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACg < 2:328290/150‑1 (MQ=255) ggTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCAACAGCAGGCAGTCAGCGTGACCATGGTAACTCCCTTCAAATTTATTTATTTTGTCGCGACCGGTAAACCCACg < 2:1386131/150‑1 (MQ=255) gTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACgg > 1:4922048/1‑150 (MQ=255) atatTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGc > 1:598050/1‑150 (MQ=255) atatTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGc > 1:5064392/1‑150 (MQ=255) tatTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGcc < 2:4979655/150‑1 (MQ=255) tatTTGGCGAAATCTGACGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACAGGATTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACAACGGGcc > 2:1744486/1‑150 (MQ=255) ctttGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCa < 2:4844460/149‑1 (MQ=255) atTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCa > 1:2352220/1‑150 (MQ=255) tttGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAg < 1:4060726/150‑1 (MQ=255) ttGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAgg < 1:5171818/150‑1 (MQ=255) tGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAGGc > 2:2183218/1‑150 (MQ=255) tGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAGGc > 2:4164974/1‑150 (MQ=255) tGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAGGc > 2:2287713/1‑150 (MQ=255) cGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAGGCGGa < 2:3533806/150‑1 (MQ=255) aaaTCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCACATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAGGCGGATg > 2:4686871/1‑150 (MQ=255) aaaTCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAGGCGGATg > 1:2226693/1‑150 (MQ=255) tGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCAGGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAGGCGGATGGCGCt > 2:4793331/1‑150 (MQ=255) tGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGACTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAGGCGGATGGCGCt > 2:975529/1‑150 (MQ=255) ccGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAGGCGGATGGCGCTCa < 1:3914710/150‑1 (MQ=255) gtaaCGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGTCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAGGCGGATGGCGCTCATg < 2:3109995/148‑1 (MQ=255) aaCGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAGGCGGATGGCGCTCATGGt < 1:1613822/150‑1 (MQ=255) | GGCAGCGGCGGAACACAGTTCATATTGCCTGCCACCGGCTCGACGATAATACAGGCAATCTCTTGCGGGTATTGCTCAAATGCGGCGCGTACAGAAGCCAGATCATTATAAGTACAGGTTAAGGTATATTTGGCGAAATCTGCCGGAACGCCCGGCGAGTTTGGCTGGCCTAACGTGAGTGCGCCAGAACCGGCTTTCACCAGCAGGCAGTCAGCGTGACCATGGTAACACCCTTCAAATTTAATAATTTTGTCGCGACCGGTAAAACCACGGGCCAGGCGGATGGCGCTCATGGTCG > CP009273/170720‑171017 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |