| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,527,522 | G→T | 5.1% | R449L (CGT→CTT) | pck → | phosphoenolpyruvate carboxykinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,527,522 | 0 | G | T | 5.1% | 1209.7 / 28.0 | 313 | R449L (CGT→CTT) | pck | phosphoenolpyruvate carboxykinase |
| Reads supporting (aligned to +/- strand): ref base G (143/153); new base T (8/9); total (151/162) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 318 total aligned reads displayed.
CGAACCGACGCCAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACA > CP009273/3527373‑3527671 | cgaaccgaCGCCAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACg > 1:3010970/1‑150 (MQ=255)cgaaccgaCGCCAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACg > 1:1958187/1‑150 (MQ=255) accgaCGCCAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTAt < 1:1520539/150‑1 (MQ=255) ccgaCGCCAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGACCGGCACTGGCAAACGTAtc > 2:1382104/1‑150 (MQ=255) cgaCGCCAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTAtct > 1:3741570/1‑150 (MQ=255) gaCGCCAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTAtctc < 1:1088380/150‑1 (MQ=255) gaCGCCAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTAtctc > 1:3911290/1‑150 (MQ=255) aCGCCAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCg < 2:2002000/150‑1 (MQ=255) cGCCAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGa < 1:2654307/150‑1 (MQ=255) gCCAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGAt > 1:438898/1‑150 (MQ=255) ccAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGAtt > 1:3566911/1‑150 (MQ=255) ccAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGAtt > 1:3857148/1‑150 (MQ=255) ccAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGAtt < 1:4413870/150‑1 (MQ=255) ccAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGAtt > 1:944573/1‑150 (MQ=255) cAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTa < 2:3920650/150‑1 (MQ=255) cAACCTTCTCAGCTTGATTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCTCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTa < 2:1067851/150‑1 (MQ=255) aaCCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTaa < 2:3101734/150‑1 (MQ=255) aCCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTaaa > 2:1339894/1‑150 (MQ=255) aCCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTaaa > 2:5032278/1‑150 (MQ=255) ccTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAg > 1:1143664/1‑150 (MQ=255) cTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGa < 2:415519/150‑1 (MQ=255) cTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGa > 1:5070331/1‑150 (MQ=255) tcCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATAcc > 2:3148732/1‑150 (MQ=255) ccGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATAccc < 2:2121699/150‑1 (MQ=255) cGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCcg < 2:3351512/150‑1 (MQ=255) gcttgcttCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCcgc < 2:3008945/150‑1 (MQ=255) cttgcttCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCcgcg > 1:2908537/1‑150 (MQ=255) ttgcttCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCgcgc < 1:1802464/150‑1 (MQ=255) tgcttCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGcc < 2:5170253/150‑1 (MQ=255) tgcttCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGcc < 1:4226761/150‑1 (MQ=255) cGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTAt < 1:784964/150‑1 (MQ=255) ggCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATc < 1:434481/150‑1 (MQ=255) cgcgGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCACACGTAGCTCGATTAAAGATACACGCGCCAGTATCGa > 2:2751241/1‑150 (MQ=255) cgGCAGTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACg < 2:4068468/150‑1 (MQ=255) gCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACTTATCTCGATTAAAGATACCCGCGCCATTATCGACGcc < 1:4548791/150‑1 (MQ=255) aTTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCAt < 1:4615230/150‑1 (MQ=255) ccTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCt > 1:4832077/1‑150 (MQ=255) cTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTc > 2:1935801/1‑150 (MQ=255) tCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAAc < 1:5082638/150‑1 (MQ=255) tCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAAc < 1:3237799/150‑1 (MQ=255) tCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAAc < 1:2395522/150‑1 (MQ=255) cGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGTCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACg < 2:1861826/150‑1 (MQ=255) tGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGtt > 2:2064602/1‑150 (MQ=255) gCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTc < 2:2218692/150‑1 (MQ=255) cACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCg < 1:1672618/150‑1 (MQ=255) cACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCg < 1:3546042/150‑1 (MQ=255) agACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAATCGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCttg < 2:4959687/149‑3 (MQ=255) gACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGa < 1:2630075/150‑1 (MQ=255) aCTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGAt < 2:695370/150‑1 (MQ=255) aGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATg > 2:3977608/1‑150 (MQ=255) gTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACTTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGc < 1:602516/150‑1 (MQ=255) gTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACTTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGc < 1:1825987/150‑1 (MQ=255) gCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGaa < 1:890395/150‑1 (MQ=255) aGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAAc < 1:3323246/150‑1 (MQ=255) aGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCtt < 2:1250321/150‑1 (MQ=255) gTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTc > 1:657064/1‑150 (MQ=255) gTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTc > 2:4853238/1‑150 (MQ=255) gCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCAc < 1:2154544/150‑1 (MQ=255) cTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCAct > 1:4829992/1‑150 (MQ=255) cTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCAct > 1:4829045/1‑150 (MQ=255) cTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCAct < 2:1496253/150‑1 (MQ=255) ggTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCActct < 1:4778991/150‑1 (MQ=255) gTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTg < 1:862250/150‑1 (MQ=255) gTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTg < 2:2422497/150‑1 (MQ=255) tGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGc > 2:4536420/1‑150 (MQ=255) tATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACTTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGtt > 2:4598571/1‑150 (MQ=255) tATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGtt < 2:833786/150‑1 (MQ=255) tATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGtt < 1:3427587/150‑1 (MQ=255) tATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGtt < 1:562634/150‑1 (MQ=255) tATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGtt > 2:1202640/1‑150 (MQ=255) aTGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCGCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGCTAATGCAGAAACCTTCACTCTGCCGATGttt > 2:1562056/1‑150 (MQ=255) gCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTaa > 2:1185739/1‑150 (MQ=255) gCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTaa < 2:3854533/150‑1 (MQ=255) cAGGCGGCGGGCGTGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGTTTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAAc < 2:3527903/150‑1 (MQ=255) aGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAAcc > 2:2590762/1‑150 (MQ=255) aGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAAcc > 1:1627621/1‑150 (MQ=255) gcggcgGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTg < 2:748599/150‑1 (MQ=255) gggcgCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGAt < 2:2429326/150‑1 (MQ=255) ggCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGa > 2:4362230/1‑150 (MQ=255) cTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAAc > 2:3815274/1‑150 (MQ=255) ttATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACt > 1:4054773/1‑150 (MQ=255) cTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCg > 1:1268308/1‑150 (MQ=255) tGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCgg > 1:3791560/1‑150 (MQ=255) acacTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAg > 2:2790199/1‑150 (MQ=255) cacTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGa > 2:1016792/1‑150 (MQ=255) ggctggAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACg < 2:4668580/150‑1 (MQ=255) tggAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAg > 1:395661/1‑150 (MQ=255) ggAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGa < 2:5085071/150‑1 (MQ=255) aaCGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGAtt < 2:626499/150‑1 (MQ=255) aaCGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGAtt < 2:2513686/150‑1 (MQ=255) aCGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATtc < 1:2763175/150‑1 (MQ=255) ggCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATtctc < 1:537736/150‑1 (MQ=255) ggCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATtctc > 2:2829454/1‑150 (MQ=255) gCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCg < 2:4497232/150‑1 (MQ=255) aCTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGAt < 1:367451/150‑1 (MQ=255) cTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATc > 2:3566698/1‑150 (MQ=255) tGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATcc < 2:5225379/150‑1 (MQ=255) ggCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCcg > 2:1732626/1‑150 (MQ=255) cGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAac > 1:2163712/1‑150 (MQ=255) gTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAaca > 2:940606/1‑150 (MQ=255) | CGAACCGACGCCAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACA > CP009273/3527373‑3527671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |