| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,813,962 | T→C | 7.8% | Q190R (CAA→CGA) | ligB ← | DNA ligase, NAD(+)‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,813,962 | 0 | T | C | 7.8% | 1096.2 / 61.1 | 331 | Q190R (CAA→CGA) | ligB | DNA ligase, NAD(+)‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (148/157); new base C (20/6); total (168/163) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.03e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 350 total aligned reads displayed.
CCAGCTCTTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTACCGCGACTGATTGCTTTG > CP009273/3813813‑3814111 | cAGCTCTTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATttgttgttg < 2:4019146/150‑1 (MQ=255) cAGCTCTTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATttgttgttg > 2:4531854/1‑150 (MQ=255) tctTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGata > 1:4003124/1‑150 (MQ=255) ctTTTAAACGATCAGACATTAACTGCGGTCCATCCTGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGatat < 2:1534990/150‑1 (MQ=255) tAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGccc < 1:4899540/150‑1 (MQ=255) aaaCGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGcccc < 2:4222226/150‑1 (MQ=255) aaCGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCAGTTATTCCCCCCATTGGTTGTTGGATATGCCCCt > 2:4252468/1‑150 (MQ=255) cGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCAGTTGTTGTTGGATATGCCCCTcg > 1:4766398/1‑150 (MQ=255) aacAGACATGACCTGCGGTCCATCCGGCCATGCCCAGACAAACACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTcgcg < 1:2718024/148‑1 (MQ=255) aGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTg > 2:4967890/1‑150 (MQ=255) aGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTg > 1:4692723/1‑150 (MQ=255) aGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTg > 2:4351488/1‑150 (MQ=255) gACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTgg < 2:1061064/150‑1 (MQ=255) aCATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGga < 2:1644911/150‑1 (MQ=255) cATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGgag < 2:4488025/150‑1 (MQ=255) cATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGgag > 2:1212393/1‑150 (MQ=255) ttAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGaa < 1:1125999/150‑1 (MQ=255) aaCTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCACCTTTTGCGCGGGCATTTATTCCCCCCAGTTGTTGTTGGATATGCCCCTCGCGCTGGAGaact > 1:2882700/1‑148 (MQ=255) aaCTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAat > 2:3435454/1‑150 (MQ=255) aaCTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAat < 1:2994944/150‑1 (MQ=255) aCTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAata < 2:3774009/150‑1 (MQ=255) aCTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAata > 1:3289402/1‑150 (MQ=255) cTGCGGTCCCTCCGGCCAGGCCCAGACAACAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCGGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTAGTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAatat < 2:556718/150‑1 (MQ=255) tGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATAtt < 2:845479/150‑1 (MQ=255) cGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTc < 2:4572487/150‑1 (MQ=255) cGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTCGGATATGCCCCTCGCGCTGGAGAAATATTTc < 1:3127/150‑1 (MQ=255) ggTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTcc > 1:1907579/1‑150 (MQ=255) gTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTccc < 1:4560948/150‑1 (MQ=255) tCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTcccc < 2:3068078/150‑1 (MQ=255) cATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCt > 1:23155/1‑150 (MQ=255) cGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTAGTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAg < 2:1993805/150‑1 (MQ=255) ggCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTCGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGc > 1:4304227/1‑150 (MQ=255) aTGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTAc < 1:1439259/150‑1 (MQ=255) tGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACt < 1:1533979/150‑1 (MQ=255) gCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTg > 1:3356223/1‑150 (MQ=255) gCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTCGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTg > 2:4638851/1‑150 (MQ=255) cccAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGt < 2:2322565/150‑1 (MQ=255) aCAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCt > 1:2541927/1‑150 (MQ=255) aaCGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTCGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAgg > 1:2681107/1‑150 (MQ=255) cGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGcc > 2:2641782/1‑150 (MQ=255) cGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGcc > 1:4649968/1‑150 (MQ=255) cAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCt < 1:2801184/150‑1 (MQ=255) cAGAGAATTCAGCGTGTCGCTATCGACCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCATCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCt > 2:1101540/1‑150 (MQ=255) agagAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTa < 2:378473/150‑1 (MQ=255) agagAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTa > 2:1950383/1‑150 (MQ=255) agagAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTa < 2:376692/150‑1 (MQ=255) agaATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAAc < 2:2102500/150‑1 (MQ=255) agaATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAAc < 1:1065383/150‑1 (MQ=255) gaATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACg < 1:480144/150‑1 (MQ=255) ttCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTCGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGtt < 1:5060723/150‑1 (MQ=255) aGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGc > 1:2153134/1‑150 (MQ=255) gtCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGcac > 1:163737/1‑150 (MQ=255) tCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGcaca > 2:1814164/1‑150 (MQ=255) gCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGc < 1:3801044/150‑1 (MQ=255) cTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑g < 1:447215/150‑1 (MQ=255) tATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑gg > 1:2071668/1‑150 (MQ=255) tATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑gg > 1:846617/1‑150 (MQ=255) tATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑gg > 2:2357677/1‑150 (MQ=255) tCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAAtt < 2:1008422/150‑1 (MQ=255) ccTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTa > 2:3954395/1‑150 (MQ=255) gcgcATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCt > 2:2631686/1‑150 (MQ=255) gcgcATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCt < 2:2430400/150‑1 (MQ=255) cgcATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTa < 2:361677/150‑1 (MQ=255) gcATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTaa < 1:3043391/150‑1 (MQ=255) atcatcAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACt > 2:328020/1‑150 (MQ=255) tcatcaAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACtt < 2:714014/150‑1 (MQ=255) atcaAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTc < 2:4860856/150‑1 (MQ=255) atcaAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTc < 2:1474191/150‑1 (MQ=255) caAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTg < 1:406455/150‑1 (MQ=255) caAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTg > 1:3031719/1‑150 (MQ=255) aaGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGc > 1:3661860/1‑150 (MQ=255) aaGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCACTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGc > 2:2263140/1‑150 (MQ=255) aaGCCAGCAACTTTTGCGCGGGCATTTAGTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGc < 2:4114719/150‑1 (MQ=255) aGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCg > 1:1371142/1‑150 (MQ=255) gCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGt < 2:959808/150‑1 (MQ=255) gCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGt > 1:3041754/1‑150 (MQ=255) cAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTcc > 2:2045978/1‑150 (MQ=255) cAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGt > 1:5200968/1‑150 (MQ=255) ttttGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTc < 2:1337812/150‑1 (MQ=255) ggCATTTATTCCCCCCCTTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCAGAAGCGTAAGGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGCGGGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCa < 2:2849070/150‑1 (MQ=255) ggCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAg < 1:3392376/150‑1 (MQ=255) gCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAgg < 1:4285911/150‑1 (MQ=255) cATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGc > 1:3505415/1‑150 (MQ=255) cATTTATTCCCCCCATTTGTTGTCGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGc > 1:1856227/1‑150 (MQ=255) aTTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGcc < 1:3804746/150‑1 (MQ=255) tATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCAtt < 1:5019545/150‑1 (MQ=255) aTTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTa < 1:4921250/150‑1 (MQ=255) aTTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTa > 1:1018591/1‑150 (MQ=255) tCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTAcc < 1:1679330/150‑1 (MQ=255) tCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGACACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTAcc < 1:88844/150‑1 (MQ=255) cccccATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTACcgc > 2:4089586/1‑150 (MQ=255) ccATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTATGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTACCGCGAc > 2:2726264/1‑150 (MQ=255) cATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTACCGCGACt > 2:1609282/1‑150 (MQ=255) cATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTACCGCGACt > 1:1190977/1‑150 (MQ=255) aTTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTACCGCGACTg > 2:524250/1‑150 (MQ=255) tgttgGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGACGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGA‑GGAATTTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTACCGCGACTGATTGCt < 2:634554/150‑1 (MQ=255) gttgGATATGCCCCTCGCGCTGGTGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTACCGCGACTGATTGCtt > 2:1738650/1‑150 (MQ=255) gttgGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTACAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTACCGCGACTGATTGCtt < 2:4787844/150‑1 (MQ=255) tgGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTACCGCGACTGATTGCTTTg > 1:2136727/1‑150 (MQ=255) tgGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTACCGCGACTGATTGCTTTg < 2:4003124/150‑1 (MQ=255) | CCAGCTCTTTTAAACGATCAGACATTAACTGCGGTCCATCCGGCCATGCCCAGACAAAAACGCCCAGAGAATTCAGCGTGTCGCTATCGTCCTGGCGCATCATCAAGCCAGCAACTTTTGCGCGGGCATTTATTCCCCCCATTTGTTGTTGGATATGCCCCTCGCGCTGGAGAAATATTTCCCCCTGAAGCGTACTGTTGGCTAAAGGCCCGCTAACGGTTTGCGGCACAGC‑GGAAATTAAGCTAACTTTCTGCGTCCAGTCCTCGCCTTTCAGGCCATTACCGCGACTGATTGCTTTG > CP009273/3813813‑3814111 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |