| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,868,359 | C→A | 8.9% | A54A (GCG→GCT) | dgoR ← | putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,868,359 | 0 | C | A | 8.9% | 1113.9 / 64.0 | 314 | A54A (GCG→GCT) | dgoR | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (140/146); new base A (21/7); total (161/153) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.65e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.40e-01 | |||||||||||
Only 100 of 316 total aligned reads displayed.
AGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATCGGTTTT > CP009273/3868210‑3868508 | aGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTc > 2:1918582/1‑150 (MQ=255) cGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATc > 2:3740749/1‑150 (MQ=255) cGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATc > 2:3741140/1‑150 (MQ=255) gCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCa > 1:3389196/1‑150 (MQ=255) gCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCa < 1:4233048/150‑1 (MQ=255) cACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAg > 2:742421/1‑150 (MQ=255) aCTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGc > 1:21772/1‑150 (MQ=255) tCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGaa < 1:490698/150‑1 (MQ=255) cGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAAc > 2:1616520/1‑150 (MQ=255) gCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACg < 2:1257454/150‑1 (MQ=255) cATGGCACTGATAAGCCGTGGGTCGTAGTAATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGaa < 2:3277439/150‑1 (MQ=255) gCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACAcc < 1:267005/150‑1 (MQ=255) aTAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACgg > 2:5021745/1‑150 (MQ=255) tAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGga > 2:4835516/1‑150 (MQ=255) aaGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGgat < 2:2075566/150‑1 (MQ=255) aaGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGgat < 1:5026962/150‑1 (MQ=255) aaGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGgat < 1:3032510/150‑1 (MQ=255) aGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGgatg > 2:3592789/1‑150 (MQ=255) aGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGgatg < 1:1500060/150‑1 (MQ=255) aGCCGTGGGTCGTAGTCATGTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGgatg < 2:4383962/150‑1 (MQ=255) ccGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGgatgat < 1:3156452/150‑1 (MQ=255) tGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGtt > 1:860749/1‑150 (MQ=255) ggTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTgc > 1:1384431/1‑150 (MQ=255) gTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTgcg > 1:3225739/1‑150 (MQ=255) aGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAgg > 1:4661439/1‑150 (MQ=255) aGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAgg > 1:2891733/1‑150 (MQ=255) cATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTg > 2:4560828/1‑150 (MQ=255) cATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTg > 2:4735405/1‑150 (MQ=255) aTTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGc > 1:2347339/1‑150 (MQ=255) aTTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGc > 1:2433133/1‑150 (MQ=255) tttCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCaa > 1:3806830/1‑150 (MQ=255) cAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAActc > 2:1687701/1‑150 (MQ=255) cAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAActc > 1:3872811/1‑150 (MQ=255) aGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAActcc < 1:1245507/150‑1 (MQ=255) aGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAActcc > 1:260961/1‑150 (MQ=255) gCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAActcct > 2:4369265/1‑150 (MQ=255) cACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAActcctc > 1:4139983/1‑150 (MQ=255) cccATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTcac < 1:1297015/150‑1 (MQ=255) cccATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTcac > 1:2257669/1‑150 (MQ=255) cccATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTcac < 1:2472843/150‑1 (MQ=255) cATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTGCGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACag > 2:4690560/1‑150 (MQ=255) cATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACag > 2:1741273/1‑150 (MQ=255) aTTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACaga > 2:2858983/1‑150 (MQ=255) aTTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACaga > 2:1452868/1‑150 (MQ=255) tGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGt > 2:3434151/1‑150 (MQ=255) tGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGt > 2:2842989/1‑150 (MQ=255) cAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCTCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTc < 2:3568876/150‑1 (MQ=255) aGTACGTCAGTGTCGATGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTcc < 1:4597751/150‑1 (MQ=255) aGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTcc < 2:527049/150‑1 (MQ=255) aGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTcc < 2:2292694/150‑1 (MQ=255) gTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCg < 2:5166562/150‑1 (MQ=255) gTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCg < 2:2066810/150‑1 (MQ=255) gTACGTCAGTGTAGAGGTAATTCCACTGGTTTCTCGGTGCCACAAACGCCCCGCTATATCGTTTCATTTCAATCAGCCGCTTCGCCATCTGCGAACGGATCCCCTCACGGATGTTGTTGCGCGAGGTTGGAAACTCCTCACAGAGTTCCg < 2:2431674/150‑1 (MQ=255) tCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCa < 1:4786668/150‑1 (MQ=255) cGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGaa < 2:4304302/150‑1 (MQ=255) cGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGaa > 1:3962046/1‑150 (MQ=255) cGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGaa > 2:4784651/1‑150 (MQ=255) gAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCGAACTCCTCACAGAGTTCCGCCTCAGCCGGAAg < 1:1471628/150‑1 (MQ=255) gAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAg > 1:2054520/1‑150 (MQ=255) gAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAg > 2:3381047/1‑150 (MQ=255) aGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAgc < 2:1504360/150‑1 (MQ=255) ggTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAgcg > 2:823754/1‑150 (MQ=255) gTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAgcgg < 1:3931138/150‑1 (MQ=255) aTTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGa < 2:1577016/150‑1 (MQ=255) ccACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGcc > 2:104687/1‑150 (MQ=255) ccACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGcc < 2:2631844/150‑1 (MQ=255) ccACTGGATACGCGCTGCCCCCACCGCCCCGCCACCACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGTAACACCTCACGGAGGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGcc < 2:3248851/150‑1 (MQ=255) cACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCt > 1:622554/1‑150 (MQ=255) aCTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTg < 1:3464913/150‑1 (MQ=255) tACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGt > 1:27810/1‑150 (MQ=255) cgcgGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTAt < 1:4714434/150‑1 (MQ=255) cgcgGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTAt < 2:2554951/150‑1 (MQ=255) cgcgGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTAt < 1:944607/150‑1 (MQ=255) gcgGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTAtt < 1:104206/150‑1 (MQ=255) tGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGcc > 1:1587582/1‑150 (MQ=255) gCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGACCGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCCCGTATTTGCCg > 2:4226791/1‑150 (MQ=255) acaAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGa > 2:2681768/1‑150 (MQ=255) caAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGaa < 1:3494832/150‑1 (MQ=255) cGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGAt < 2:3302865/150‑1 (MQ=255) gCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATc > 2:1968432/1‑150 (MQ=255) gCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATc > 1:734415/1‑150 (MQ=255) cgcgATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGtt > 1:4327665/1‑150 (MQ=255) gcgATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGttt < 1:1958818/150‑1 (MQ=255) cgATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTa > 2:4045607/1‑150 (MQ=255) tAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTAccc < 1:5219932/150‑1 (MQ=255) tAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTAccc < 1:77063/150‑1 (MQ=255) aaCGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCa < 2:4471966/150‑1 (MQ=255) aaCGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCa < 2:2646266/150‑1 (MQ=255) aaCGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCa < 1:3333924/150‑1 (MQ=255) aCGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAg < 1:3739913/150‑1 (MQ=255) gTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCg > 2:64315/1‑150 (MQ=255) catttcaATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAAt > 1:4376907/1‑150 (MQ=255) ttcaATCAGCCGCTTAGCCCTCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGGTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGAc < 2:587016/150‑1 (MQ=255) aaTCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAAt < 2:480224/150‑1 (MQ=255) tCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACACTGc > 2:3571445/1‑150 (MQ=255) tCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGc < 1:2133506/150‑1 (MQ=255) cAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCg > 2:1175643/1‑150 (MQ=255) ccGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATc < 2:362841/150‑1 (MQ=255) cTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATCGGt > 1:4766530/1‑150 (MQ=255) tCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGGTCGGttt < 2:2975359/150‑1 (MQ=255) | AGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATCGGTTTT > CP009273/3868210‑3868508 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |