| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,882,760 | T→A | 6.4% | V224E (GTG→GAG) | tnaA → | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,882,760 | 0 | T | A | 6.4% | 1076.6 / 46.9 | 311 | V224E (GTG→GAG) | tnaA | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (142/149); new base A (7/13); total (149/162) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
Only 100 of 326 total aligned reads displayed.
GGGATTAGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATGCGATGG > CP009273/3882611‑3882909 | ggATTAGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCggtg < 1:4084292/150‑1 (MQ=255) ggATTAGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCggtg < 1:2936345/150‑1 (MQ=255) aTTAGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCggtggt > 1:226206/1‑150 (MQ=255) tAGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTaa > 1:3724047/1‑150 (MQ=255) tAGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTaa > 1:1789257/1‑150 (MQ=255) gcgGAATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACt < 1:207408/150‑1 (MQ=255) cgGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTc > 1:3518357/1‑150 (MQ=255) ggTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTcc > 1:3143483/1‑150 (MQ=255) ggTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTcc < 2:3750869/150‑1 (MQ=255) tATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCcgc > 1:2439526/1‑150 (MQ=255) ttGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCcgcgc > 2:602928/1‑150 (MQ=255) tGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCcgcgcg > 1:1134375/1‑150 (MQ=255) gaagaaGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCgcgcgc > 1:3081046/1‑150 (MQ=255) agaagTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCtt < 1:2275764/150‑1 (MQ=255) agaagTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGAGGTAATGGACTCCGCGCGCtt < 2:4637848/150‑1 (MQ=255) gaagTTGGTCCGATTAACGTGCAGTATATCGTAGCAACGATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAATCTTAAATGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCTCttt < 2:4980198/150‑1 (MQ=255) aagTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTg > 1:2196993/1‑150 (MQ=255) gTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCt > 1:51639/1‑150 (MQ=255) tGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGa > 2:5155076/1‑150 (MQ=255) tGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGa < 1:58092/150‑1 (MQ=255) ggTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGaa > 1:4511433/1‑150 (MQ=255) ccGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAAc < 2:1815360/150‑1 (MQ=255) aaTAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGcc > 1:3278504/1‑150 (MQ=255) tAACGTGCCGTATATCGTTGCAACCATGACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTa < 2:4443811/150‑1 (MQ=255) tAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTa > 1:5123120/1‑150 (MQ=255) aaCGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTAt > 1:1816308/1‑150 (MQ=255) aaCGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATAGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTAt < 1:862184/150‑1 (MQ=255) aCGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTAtt < 1:389378/150‑1 (MQ=255) gTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTtc > 1:1986643/1‑150 (MQ=255) gCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTtcat < 1:2606668/150‑1 (MQ=255) gCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTtcat < 2:4967148/150‑1 (MQ=255) gTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCaa > 2:2043136/1‑150 (MQ=255) atatCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAagc < 1:4357767/150‑1 (MQ=255) tCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAagcagc < 1:1776914/150‑1 (MQ=255) gTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGt > 1:4775871/1‑150 (MQ=255) aaCCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGc > 2:4266342/1‑150 (MQ=255) aaCCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGc > 1:4043567/1‑150 (MQ=255) cATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGa < 2:2546829/150‑1 (MQ=255) cATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGa < 2:4120594/150‑1 (MQ=255) cATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTGTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGa < 2:1512223/150‑1 (MQ=255) aTCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGaa > 2:4191207/1‑150 (MQ=255) aTCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGaa < 2:3966650/150‑1 (MQ=255) tCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTTGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAAt < 1:1540424/150‑1 (MQ=255) tCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAAt < 1:4582989/150‑1 (MQ=255) cACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATa > 1:2649716/1‑150 (MQ=255) ccAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACa > 1:3856200/1‑150 (MQ=255) ccAGTAACTCTGCAGGTGGTCAGCCGGGTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTGTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACa < 2:3343469/150‑1 (MQ=255) gTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAg > 1:976134/1‑150 (MQ=255) aCTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACt < 2:1847554/150‑1 (MQ=255) ctctGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTg > 1:491015/1‑150 (MQ=255) tctGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTgg > 2:114743/1‑150 (MQ=255) tctGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTgg < 1:5020556/150‑1 (MQ=255) tGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGAc < 1:3305083/150‑1 (MQ=255) tGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGACTATATCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGAc > 2:1654100/1‑150 (MQ=255) cAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCa < 2:3303228/150‑1 (MQ=255) cAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTGTGCTGAAAACGCCTATTTCATCCAGCAGCGTGAAGCAGAATACAAAGACTGGAccc > 2:4517393/1‑149 (MQ=255) gtggtCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCg < 1:597288/150‑1 (MQ=255) tggtCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGa < 2:2483285/150‑1 (MQ=255) ggtCAGCCGTTTTCACTGGCAAACTTCAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTGTGCGGAAAACGCCTATTTCATCGAGCAGCGTGAAGCTGTATACTAAGACTGGACCACCGAg < 2:3649139/150‑1 (MQ=255) ggtCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAg < 1:544994/150‑1 (MQ=255) gtCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGc > 1:3955778/1‑150 (MQ=255) aGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGa > 2:4346582/1‑150 (MQ=255) gCCGGTTTCACTTGCAAACTTAACAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGAt < 2:3439853/150‑1 (MQ=255) ggTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCAc < 1:1223172/150‑1 (MQ=255) gTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGACTACAAAGACTGGACACTCGAGCAGATCAcc > 2:2817007/1‑150 (MQ=255) gTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCAcc < 1:761320/150‑1 (MQ=255) gTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCAcc < 2:4901982/150‑1 (MQ=255) tCACTGGCAAACTTAAAAGAGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCcgc < 2:2765849/150‑1 (MQ=255) cTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGaa < 1:3634949/150‑1 (MQ=255) cTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGaa < 1:1014623/150‑1 (MQ=255) aaCTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTAc > 2:4398545/1‑150 (MQ=255) tAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAat < 2:2932320/150‑1 (MQ=255) aaaGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAatat > 2:3182827/1‑150 (MQ=255) aaGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATg > 2:5090369/1‑150 (MQ=255) aaGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATg < 1:2349945/150‑1 (MQ=255) gATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGa > 2:898863/1‑150 (MQ=255) gATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGa < 1:3914662/150‑1 (MQ=255) aTGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGat > 2:2310673/1‑150 (MQ=255) gTACAGCATCGCGAAGAAATACGATATTCCGGTGGTCATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGatat > 1:2475520/1‑150 (MQ=255) gTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGatat < 2:2723945/150‑1 (MQ=255) tACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATg > 1:1710132/1‑150 (MQ=255) tACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATg > 1:2492461/1‑150 (MQ=255) tACAGCATCGCGAAGAAATACGATATTCCGGAGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATg > 1:4149735/1‑150 (MQ=255) cAGCATCGCGAAGAAATACGATATTCCGGAGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCt < 1:2882878/150‑1 (MQ=255) aGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTg < 2:2410819/150‑1 (MQ=255) aGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTg < 1:1881149/150‑1 (MQ=255) cATCGCGAAGAAATAAGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGc < 2:1692262/150‑1 (MQ=255) aTCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCg > 1:3648282/1‑150 (MQ=255) tCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGa < 1:5200407/150‑1 (MQ=255) cgcgAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGAt > 2:2880755/1‑150 (MQ=255) cgAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGt < 2:3570016/150‑1 (MQ=255) gaagaaATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTc > 2:2646126/1‑150 (MQ=255) gaagaaATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGAAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTc > 2:525626/1‑150 (MQ=255) aaaTACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGcc > 2:1363085/1‑150 (MQ=255) taagATATACCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGAAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCaag > 2:2524788/4‑150 (MQ=255) tACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCaag < 2:180846/150‑1 (MQ=255) tatTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCaagaaaga > 1:3410171/1‑150 (MQ=255) atTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGAt > 2:825310/1‑150 (MQ=255) ttCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATg > 2:1267841/1‑150 (MQ=255) cGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATGCGa < 2:721005/150‑1 (MQ=255) | GGGATTAGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATGCGATGG > CP009273/3882611‑3882909 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |