| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,259,875 | G→T | 5.5% | S178S (TCG→TCT) | aphA → | acid phosphatase/phosphotransferase, class B, non‑specific |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,259,875 | 0 | G | T | 5.5% | 1205.5 / 34.4 | 329 | S178S (TCG→TCT) | aphA | acid phosphatase/phosphotransferase, class B, non‑specific |
| Reads supporting (aligned to +/- strand): ref base G (149/162); new base T (11/7); total (160/169) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.34e-01 | |||||||||||
Only 100 of 336 total aligned reads displayed.
CGCGGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGG > CP009273/4259726‑4260024 | cgcgGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCg < 1:3577799/150‑1 (MQ=255)cgcgGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCg < 1:3420920/150‑1 (MQ=255)cgcgGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCg < 1:2594145/150‑1 (MQ=255) ggTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCaa > 1:4016508/1‑150 (MQ=255) gACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATgg < 2:3796942/150‑1 (MQ=255) cgcgATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCt < 1:1011246/150‑1 (MQ=255) cgcgATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCt > 2:4288682/1‑150 (MQ=255) cgcgATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCt < 2:3711120/150‑1 (MQ=255) gATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCa < 2:4204979/150‑1 (MQ=255) gATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCa > 1:1964734/1‑150 (MQ=255) cttcttTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGa > 1:5164182/1‑150 (MQ=255) ttcttTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGAt > 1:782624/1‑150 (MQ=255) ttcttTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGAt > 2:3536666/1‑150 (MQ=255) tcttTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATa > 1:3721283/1‑150 (MQ=255) ttGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGCATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATaaaa < 2:267977/150‑1 (MQ=255) ttGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATaaaa < 1:3848032/150‑1 (MQ=255) tgtgACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCGAAATACAAAATCGCAATGGCTGCAGGATaaaaa > 2:2150153/1‑150 (MQ=255) tgACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAata < 2:840363/150‑1 (MQ=255) gACTGGTCGTAGCCCGAAGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAatat < 2:1037635/150‑1 (MQ=255) aCTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATc < 2:639236/150‑1 (MQ=255) aCTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATc < 2:1902114/150‑1 (MQ=255) aCTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATc < 1:5218038/150‑1 (MQ=255) cTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCACCATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAGAATACAAAATCGCAATGGCTGCAGGATAAAAATATcc > 2:5226543/1‑150 (MQ=255) cTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATcc > 1:3485399/1‑150 (MQ=255) tGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCg > 2:4600537/1‑150 (MQ=255) ggTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGa > 1:2933680/1‑150 (MQ=255) gTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGaa > 2:3486348/1‑150 (MQ=255) cGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAAtt < 1:497670/150‑1 (MQ=255) cGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAAtt < 1:1118396/150‑1 (MQ=255) cGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAAtt > 2:2589599/1‑150 (MQ=255) cGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAAtt < 2:340241/150‑1 (MQ=255) aGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAAttttt < 2:682186/150‑1 (MQ=255) ccGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGTCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTAt < 2:4526718/150‑1 (MQ=255) ccGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCTCAATGGCTGCAGGATAAAAATATCCGAATTTTTTAt > 1:2291483/1‑150 (MQ=255) cgacgaAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCTCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATg > 1:1085997/1‑150 (MQ=255) cgacgaAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATg < 2:2962198/150‑1 (MQ=255) cgacgaAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATg < 2:1957868/150‑1 (MQ=255) gacgaAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATgg < 2:5004075/150‑1 (MQ=255) acgaAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGc > 2:3657633/1‑150 (MQ=255) cgaAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCg < 1:2658068/150‑1 (MQ=255) cgaAAACAGAAACGGTCTCACAAACGCTGGCGGATAAATTTCATAGTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCg < 2:4935735/150‑1 (MQ=255) gaAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGa > 1:1570181/1‑150 (MQ=255) aaaaCAGAAACGGTTTCAAAAACGCTGGCGTATAATTTTCATATTACTGCCACCAACATGAATCCGGTGATCTTTGCGGGAGATAAACAAGGGCAAAATACAAAATCGAAATGGCTGCAGGATAAAAATATCAGAATGTTTTATGGCGAt > 2:2758110/1‑150 (MQ=255) aaaCAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGAtt < 1:2376024/150‑1 (MQ=255) aaCAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTc > 1:2688761/1‑150 (MQ=255) aaCAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATACGAATTTTTTATGGCGAtta > 2:4605661/1‑149 (MQ=255) aCAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCTCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCt < 2:77000/150‑1 (MQ=255) aCAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCt > 1:882344/1‑150 (MQ=255) aGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGa > 1:4211751/1‑150 (MQ=255) aaaCGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATa > 1:2997145/1‑150 (MQ=255) ccGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAAt < 2:3277451/149‑1 (MQ=255) tttCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGata < 1:1410739/150‑1 (MQ=255) ttCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGatat < 2:1492351/150‑1 (MQ=255) tgcAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGatat < 2:4102510/148‑1 (MQ=255) tCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATAtt < 2:4814878/150‑1 (MQ=255) cAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTa > 2:18434/1‑150 (MQ=255) aaaaaCGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTAc > 2:2293988/1‑150 (MQ=255) aaaCGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTAccg < 1:507937/150‑1 (MQ=255) cTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCa > 2:4783616/1‑150 (MQ=255) ggCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCTAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCAcg > 2:1998323/1‑150 (MQ=255) cGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAATATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCAcgcg > 2:2494615/1‑150 (MQ=255) cGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCAcgcg > 2:2613472/1‑150 (MQ=255) gATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGAt < 2:1064053/150‑1 (MQ=255) aTAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATg < 1:1931052/150‑1 (MQ=255) aTTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCTAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCg < 1:1535982/150‑1 (MQ=255) tttCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGgc < 1:1377881/150‑1 (MQ=255) cATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCt > 2:1806956/1‑150 (MQ=255) ttCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTg > 1:1998462/1‑150 (MQ=255) ttCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTg < 1:2090361/150‑1 (MQ=255) ttCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTg > 2:5190772/1‑150 (MQ=255) caACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCAt < 1:2051468/150‑1 (MQ=255) aaCATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCAtt > 2:2361114/1‑150 (MQ=255) aCATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTc > 2:3027956/1‑150 (MQ=255) aTGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTg > 1:4504077/1‑150 (MQ=255) aTCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTgcgcg < 1:472491/150‑1 (MQ=255) ccGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGcc > 1:1194747/1‑150 (MQ=255) gTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTcc < 1:2184722/150‑1 (MQ=255) gATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTATTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCaa > 2:3089557/1‑150 (MQ=255) cTTTGCGGGTGATAAACCATGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAActc < 2:3946927/150‑1 (MQ=255) cTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAActc < 2:4319851/150‑1 (MQ=255) tttGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAActct < 1:1260456/150‑1 (MQ=255) gCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTctacc < 1:596894/150‑1 (MQ=255) cGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACaa > 1:1755670/1‑150 (MQ=255) aaCCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCt < 2:1530058/150‑1 (MQ=255) cAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGc > 2:228692/1‑150 (MQ=255) cAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGc > 2:615336/1‑150 (MQ=255) cAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGc > 1:685102/1‑150 (MQ=255) aGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGcc > 1:1692499/1‑150 (MQ=255) aGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGcc < 2:1148266/150‑1 (MQ=255) aaaTACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCACCTCTCCCTCCAATCCCTTGCCACCAGc > 2:4083088/1‑150 (MQ=255) aaaTACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGc < 1:4349471/150‑1 (MQ=255) aaTACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCg > 2:4762879/1‑150 (MQ=255) cAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCTCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTg < 2:3450459/150‑1 (MQ=255) cAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCTCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTg > 2:2562217/1‑150 (MQ=255) cAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCTCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTg > 2:2876242/1‑150 (MQ=255) aaaaTCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGc > 1:3262757/1‑150 (MQ=255) aaaaTCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGc < 1:1167240/150‑1 (MQ=255) aaaTCTCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCg > 1:3048161/1‑150 (MQ=255) tCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGttt > 2:4430082/1‑150 (MQ=255) cGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTg < 2:5243602/150‑1 (MQ=255) | CGCGGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGG > CP009273/4259726‑4260024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |