| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,483,103 | G→A | 6.8% | G22G (GGC→GGT) | idnO ← | 5‑keto‑D‑gluconate‑5‑reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,483,103 | 0 | G | A | 6.8% | 1017.9 / 40.8 | 292 | G22G (GGC→GGT) | idnO | 5‑keto‑D‑gluconate‑5‑reductase |
| Reads supporting (aligned to +/- strand): ref base G (109/163); new base A (5/15); total (114/178) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 296 total aligned reads displayed.
TCATGTTTATGAGTAACATTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCGGCGAAACGTAGCGCCTCT > CP009273/4482954‑4483252 | cATGTTTATGAGTAACATTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGc > 2:27712/1‑150 (MQ=255) aTGTTTATGAGTAACATTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGcc < 1:5134190/150‑1 (MQ=255) gTTTATGAGTAACATTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCaa > 2:1191509/1‑150 (MQ=255) gTTTATGAGTAACATTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCaa > 2:2619993/1‑150 (MQ=255) gTTTATGAGTAACATTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATATGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCaa > 1:3560571/1‑150 (MQ=255) tttATGAGTAACATTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAAt < 1:1804446/150‑1 (MQ=255) ctGAGTAACATTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGcc < 2:5115749/149‑1 (MQ=255) tGAGTAACATTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGccc > 1:2155438/1‑150 (MQ=255) tAACATTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCtgtg > 1:4376766/1‑150 (MQ=255) tAACATTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCtgtg > 2:1263615/1‑150 (MQ=255) aCATTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAAAGCCCTGTGCt > 2:1168341/1‑150 (MQ=255) cATTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTg < 1:1569405/150‑1 (MQ=255) aTTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGa > 1:3334020/1‑150 (MQ=255) aaaaGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAAcc > 2:4424266/1‑150 (MQ=255) aaaaGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAAcc > 2:3002939/1‑150 (MQ=255) aaaaGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAAcc < 2:3573992/150‑1 (MQ=255) aaaGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCg > 1:3242995/1‑150 (MQ=255) gTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTaa < 2:2100030/150‑1 (MQ=255) gTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTaa < 1:252669/150‑1 (MQ=255) gCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAg < 1:2083917/150‑1 (MQ=255) aCGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGata < 1:3430089/150‑1 (MQ=255) cGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTATGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGatat < 2:4226475/150‑1 (MQ=255) ggCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATAtt < 1:3632483/150‑1 (MQ=255) gCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAACCAATGCCCTGTGCTGAACCGGTAATCAAGATAttt < 2:4066825/150‑1 (MQ=255) tGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGCTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCTGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATAtttttt < 2:558698/150‑1 (MQ=255) gAATACCCTCCTGTTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTAGGCAGTAATATCATAAATAATTATTTGTGCGCCATATTTACACAGGCCGGTTGCCAGTAAAAAGACAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTc > 2:3422021/1‑150 (MQ=255) aaTACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTcc < 2:1921550/150‑1 (MQ=255) aaTACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAACCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTcc < 1:4479587/150‑1 (MQ=255) aaTACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGAGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAAAGCCCTGTGCTGAACCGGTAATAAAGATATTTTTTcc > 1:2113625/1‑150 (MQ=255) aTACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCt > 1:2262764/1‑150 (MQ=255) aCCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGc < 2:2868508/150‑1 (MQ=255) aCCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTGTCCTGc < 2:5201137/150‑1 (MQ=255) cccTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGcc < 1:5017379/150‑1 (MQ=255) ctGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGa < 1:695161/150‑1 (MQ=255) tggAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAAt < 2:1515647/150‑1 (MQ=255) tggAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAAt < 2:1784866/150‑1 (MQ=255) tggAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAAt < 2:1784805/150‑1 (MQ=255) tggAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAAt < 2:387960/150‑1 (MQ=255) aGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGa > 2:2193185/1‑150 (MQ=255) gTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGAt < 1:116955/150‑1 (MQ=255) gTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGAt < 1:1007900/150‑1 (MQ=255) gTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGAt < 1:2887165/150‑1 (MQ=255) tttttCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCCGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATc < 2:4664552/150‑1 (MQ=255) tttttCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATc < 1:3054686/150‑1 (MQ=255) tCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTc > 1:254663/1‑150 (MQ=255) cAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCAGATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTg < 2:3137555/150‑1 (MQ=255) aGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGt > 1:798817/1‑150 (MQ=255) aaGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGtatt < 2:4947742/150‑1 (MQ=255) aaGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGtatt < 1:2399056/150‑1 (MQ=255) tccgcgcGTGCGGCACTAATATCCGTAAGAAATCTCTCTCCCCCATACTTACCCCGGCCGGTTGCCAGTAACAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTc < 2:4473090/147‑1 (MQ=255) tCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTc > 1:167071/1‑150 (MQ=255) cTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTcc > 1:4570520/1‑150 (MQ=255) tGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCt > 2:4395677/1‑150 (MQ=255) gcgcGTTCGTCAGTAATATCATAAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCtt < 2:3600234/150‑1 (MQ=255) gcgcGTTCGGCAGTAATATCATTAATTATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCtt < 2:3930913/150‑1 (MQ=255) gcgcGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCtt < 2:933539/150‑1 (MQ=255) cgcgTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCttt > 2:2970825/1‑150 (MQ=255) tCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCtttattta < 2:3527256/150‑1 (MQ=255) gCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTAtct < 1:3971491/150‑1 (MQ=255) gCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTAtct < 1:628326/150‑1 (MQ=255) cAGTAATATCATAAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTAtctc < 2:3660855/150‑1 (MQ=255) cAGTAAAAACATTAATAATTATTTGTGCCCCATATTTACCCATGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTAtctc < 2:3190558/150‑1 (MQ=255) aGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAACCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATctct < 2:3704605/150‑1 (MQ=255) gTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCtt > 2:111025/1‑150 (MQ=255) gTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCtt > 1:880068/1‑150 (MQ=255) gTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAACCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCtt < 2:158765/150‑1 (MQ=255) aaTATCATTAATTATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATTCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAg < 2:716366/150‑1 (MQ=255) aaTATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAg > 1:1892085/1‑150 (MQ=255) atatCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGa > 1:3906325/1‑150 (MQ=255) atatCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGa > 1:4117964/1‑150 (MQ=255) tatCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTATaa > 2:4848543/1‑150 (MQ=255) tCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGaaaa < 2:2453001/150‑1 (MQ=255) cATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAATATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAAc > 1:2970867/1‑150 (MQ=255) ttAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACaa < 1:2467885/150‑1 (MQ=255) taatTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTg < 1:46633/150‑1 (MQ=255) taatTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTg < 1:4351654/150‑1 (MQ=255) taatTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTg < 1:4253273/150‑1 (MQ=255) aatTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTgg < 2:4985455/150‑1 (MQ=255) attattTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGa < 2:4583857/150‑1 (MQ=255) attattTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGa > 1:2917574/1‑150 (MQ=255) attTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACtt < 1:3901052/150‑1 (MQ=255) tttGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACttt < 1:5166451/150‑1 (MQ=255) tttGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACttt < 1:541697/150‑1 (MQ=255) tgCGCCATCTTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTtgct < 2:4750620/150‑1 (MQ=255) tgCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTtgct > 1:2627215/1‑150 (MQ=255) tACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGtttt < 1:2805981/150‑1 (MQ=255) tACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGtttt > 1:489596/1‑150 (MQ=255) tACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGtttt > 1:753269/1‑150 (MQ=255) aCCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTa < 1:4717040/150‑1 (MQ=255) aGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCAc < 1:2577170/150‑1 (MQ=255) gCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCg < 2:4570520/150‑1 (MQ=255) ccGGTTGCCAGTAAAAAGCCAAGGCCCTGTGCTGAACCGGTAATCAAGATATTGTGTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCgg < 2:43504/150‑1 (MQ=255) ggTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCGGCg > 2:1437305/1‑150 (MQ=255) ttGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCGGCGaa > 2:1371745/1‑150 (MQ=255) ttGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCGGCGaa < 1:2656797/150‑1 (MQ=255) gTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCGGCGAAACGTAg > 1:3145034/1‑150 (MQ=255) aaaaGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCGGCGAAACGTAgcgc > 2:3837831/1‑150 (MQ=255) aGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCGGCGAAACGTAGCGCctc < 1:4868747/150‑1 (MQ=255) gCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCGGCGAAACGTAGCGCctct > 2:1704241/1‑150 (MQ=255) gCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCGGCGAAACGTAGCGCctct > 2:3313231/1‑150 (MQ=255) | TCATGTTTATGAGTAACATTAAAAGGTGCGGCAACGGCCTGAATACCCTCCTGGTGGAGTTTTTCTACAGCAAGTTCTGCGCGTTCGGCAGTAATATCATTAATAATTATTTGTGCGCCATATTTACCCAGGCCGGTTGCCAGTAAAAAGCCAATGCCCTGTGCTGAACCGGTAATCAAGATATTTTTTCCTGCCAGTGAAAATAGATCGTTCATTGTATTATTCCTTTATTTATCTCTTAGAAAACAAGCTGGACTTTTGCTGCCTGGGTTTTATCACCGGCGAAACGTAGCGCCTCT > CP009273/4482954‑4483252 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |