Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 4,521,271 | C→A | 5.8% | A66A (GCG→GCT) | sgcX ← | putative endoglucanase with Zn‑dependent exopeptidase domain |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 4,521,271 | 0 | C | A | 5.8% | 1115.7 / 28.3 | 292 | A66A (GCG→GCT) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain |
Reads supporting (aligned to +/- strand): ref base C (136/138); new base A (10/8); total (146/146) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 8.09e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 294 total aligned reads displayed.
GATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCGTGTCCTGAAATC > CP009273/4521124‑4521418 | gATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATgcgc > 2:3825183/1‑150 (MQ=255) aTACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCa < 1:2454839/150‑1 (MQ=255) tACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCaa > 2:1405984/1‑150 (MQ=255) cATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAatcat > 2:1224368/1‑150 (MQ=255) tGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAAtcatca < 2:5113281/150‑1 (MQ=255) gagtGGCACTGTGTCCCCGGTGAGGGTGTCGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCCTAAAACCGACTTCATCCATATGCGCTAAAATCATCAg < 2:2706073/147‑1 (MQ=255) gACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAg < 1:1100130/150‑1 (MQ=255) gACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAg < 2:2458365/150‑1 (MQ=255) aCTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAATACCGACTTCATCCATATGCGCAAAAATCATCAGt > 1:3536697/1‑150 (MQ=255) aCTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATCTGAGCAAAAATCATCAGt > 2:2899217/1‑150 (MQ=255) tGGCCCTGTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCg < 2:4228727/150‑1 (MQ=255) cccTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAg > 2:1293083/1‑150 (MQ=255) cccTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAg < 1:5192887/150‑1 (MQ=255) ccTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAgc > 2:2600191/1‑150 (MQ=255) ccTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCAAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCATTCGCAga > 2:1216149/1‑149 (MQ=255) gTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATc > 1:726049/1‑150 (MQ=255) gTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATc > 2:656531/1‑150 (MQ=255) tCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGTCTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCg > 1:5117542/1‑150 (MQ=255) tCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCg < 1:5069581/150‑1 (MQ=255) tCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCg < 2:4164424/150‑1 (MQ=255) cccGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCggg > 1:1170637/1‑150 (MQ=255) ggTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGttt > 2:2276176/1‑150 (MQ=255) ggTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGttt > 1:341328/1‑150 (MQ=255) ggTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGttt > 1:3320087/1‑150 (MQ=255) gggTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCAc > 2:3063081/1‑150 (MQ=255) gggTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCAc < 1:2009834/150‑1 (MQ=255) cGATGGAAACAGCCATAGAGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGt < 2:4980530/150‑1 (MQ=255) gAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACAATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAgcgc > 1:1862004/1‑150 (MQ=255) aCCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAgcgcgc > 1:4038715/1‑150 (MQ=255) aGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGAGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGcgac < 2:1689894/150‑1 (MQ=255) ccATAGTGACCTGCGCAGGACCGCCTACGCGTTCACAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATAAGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGcgacga < 2:389418/150‑1 (MQ=255) cATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCgacgac < 2:4763018/150‑1 (MQ=255) gTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTc > 2:5033562/1‑150 (MQ=255) gTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTc > 2:2995024/1‑150 (MQ=255) gACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTccc < 1:3238401/150‑1 (MQ=255) aCCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCa < 1:1254692/150‑1 (MQ=255) cTGCGCAGGACCGCCTACGCTTTAAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAg < 1:4311189/150‑1 (MQ=255) cTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAg < 2:3400943/150‑1 (MQ=255) tGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGAGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATAACTACCGTAGCGCGCGACGACATTCCCAAGc > 1:3091040/1‑150 (MQ=255) cgcAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCt < 1:3166347/150‑1 (MQ=255) cAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGt > 1:2629198/1‑150 (MQ=255) cAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGt < 2:1525716/150‑1 (MQ=255) cAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGt < 2:2215863/150‑1 (MQ=255) ggACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGtct < 1:2546542/150‑1 (MQ=255) gACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGtctc < 1:2156740/150‑1 (MQ=255) gACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGtctc < 1:2856800/150‑1 (MQ=255) cGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGcc > 1:4821875/1‑150 (MQ=255) ccTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAg > 1:868379/1‑150 (MQ=255) cTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGGGTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGa > 1:3928908/1‑150 (MQ=255) cTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGa > 2:3467241/1‑150 (MQ=255) cTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGa > 1:1419039/1‑150 (MQ=255) cgcgTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACct < 1:57007/150‑1 (MQ=255) cGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGa > 2:4329718/1‑150 (MQ=255) gTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGAc > 1:1307203/1‑150 (MQ=255) gTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGAc > 2:1615770/1‑150 (MQ=255) gTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGAGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGAc < 2:3891496/150‑1 (MQ=255) aaaaaTCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGc > 2:3333550/1‑150 (MQ=255) aTCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTGGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGa > 1:4895194/1‑150 (MQ=255) tCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGaa > 2:4063952/1‑150 (MQ=255) tCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGaa < 2:2637157/150‑1 (MQ=255) cGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGAGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATACGca > 2:1081651/1‑150 (MQ=255) ggCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGcac > 1:991408/1‑150 (MQ=255) gCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGcaca > 1:1037168/1‑150 (MQ=255) gCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGcaca > 2:4456765/1‑150 (MQ=255) ctctATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCACATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAg > 1:3712539/1‑150 (MQ=255) ctATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCa > 1:5224143/1‑150 (MQ=255) tATTTTGCGCACCATAACACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCAt < 1:5019593/150‑1 (MQ=255) tGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGt > 1:1434470/1‑150 (MQ=255) gcgcACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTc < 1:2994970/150‑1 (MQ=255) cgcACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCa > 1:3632144/1‑150 (MQ=255) cgcACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCa < 2:3272460/150‑1 (MQ=255) gcACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAg < 2:3509782/150‑1 (MQ=255) cACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGc < 2:3583861/150‑1 (MQ=255) cACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGc < 2:1918729/150‑1 (MQ=255) aCCATAACACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCg < 1:1634268/150‑1 (MQ=255) ccATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGa < 1:2276176/150‑1 (MQ=255) cATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGAc > 2:2767316/1‑150 (MQ=255) aTAAAACCGCCTTCATCCATATGAGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGACTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGTCGTCAGCGACa < 1:3390903/150‑1 (MQ=255) aTAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACa < 1:3887618/150‑1 (MQ=255) aTAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACa > 1:1802226/1‑150 (MQ=255) aTAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACa < 1:1271885/150‑1 (MQ=255) tAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAg > 2:2986472/1‑150 (MQ=255) aaaaCCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGc > 1:1691684/1‑150 (MQ=255) ccGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGttt < 2:196695/150‑1 (MQ=255) cGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGtttt < 1:4623590/150‑1 (MQ=255) gACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTc > 2:2092765/1‑150 (MQ=255) gACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTc < 2:2568493/150‑1 (MQ=255) aCTTCATCCATATGAGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCg < 2:731705/150‑1 (MQ=255) tCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCgtgt > 2:3744767/1‑150 (MQ=255) tCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCgtgt < 2:21593/150‑1 (MQ=255) tCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCgtgt > 2:1127110/1‑150 (MQ=255) tCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCgtgt < 2:4614033/150‑1 (MQ=255) cATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCGTGTc > 1:1281284/1‑150 (MQ=255) aTCCATATGAGCAATAATCATAAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGAAGACATTCCAAAGCCTGACTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCCTGACGTCAGCGACAGCGATTTCGTGTcc > 2:3958318/1‑150 (MQ=255) aTCCATATGAGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCGTGTcc > 2:3113032/1‑150 (MQ=255) tCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCGTGTCCt < 2:4658959/150‑1 (MQ=255) tCCATATGAGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCGTGTCCt > 1:2694280/1‑150 (MQ=255) atatGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCGTGTCCTGaa > 2:3047815/1‑150 (MQ=255) atatGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCGTGTCCTGaa > 1:4756977/1‑150 (MQ=255) atGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCGTGTCCTGAAAt < 2:827966/150‑1 (MQ=255) | GATACACCCCATGACTGGCCCTTTGTCCCCGGTGAGGGTGACGATGGAACCAGCCATAGTGACCTGCGCAGGACCGCCTACGCGTTCAAAGCGTAAAAATCCAGACGGCTCTATTTTGCGCACCATAAAACCGACTTCATCCATATGCGCAAAAATCATCAGTCGCAGCGCATCGGGTTTATCACTACCGTAGCGCGCGACGACATTCCCAAGCCTGTCTCGCCAGACCTCTTTTGCCTGACGCCTGAATTCGCACAGCATGACGTCAGCGACAGCGTTTTCGTGTCCTGAAATC > CP009273/4521124‑4521418 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |