| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 447,252 | G→A | 5.8% | intergenic (‑186/+274) | cyoA ← / ← ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 447,252 | 0 | G | A | 5.8% | 1151.4 / 38.7 | 325 | intergenic (‑186/+274) | cyoA/ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide transporter |
| Reads supporting (aligned to +/- strand): ref base G (119/187); new base A (11/8); total (130/195) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01 | |||||||||||
Only 100 of 343 total aligned reads displayed.
AAAGTGTGTGGGCATTTTACGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAATAGAATTTATAA > CP009273/447103‑447401 | aaaGTGTGTGGGCATTTTACGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAggg < 1:1704251/150‑1 (MQ=255) aaGTGTGTGGGCATTTTACGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAgggg > 1:3828500/1‑150 (MQ=255) gtgtgGGCATTTTACGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTg < 2:2180358/150‑1 (MQ=255) tgtgGGCATTTTACGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGc > 2:2422494/1‑150 (MQ=255) gggCATTTTACGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGa < 1:4357527/150‑1 (MQ=255) ggCATTTTACGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGaa < 2:370725/150‑1 (MQ=255) ggCATTTTACGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGaa < 1:5162239/150‑1 (MQ=255) gCATTTTACGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAg < 2:440478/150‑1 (MQ=255) gCATTTTACGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAg < 2:4955370/150‑1 (MQ=255) aTTTTACGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGa < 2:1771520/150‑1 (MQ=255) tACGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCt < 2:106060/150‑1 (MQ=255) aCGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTg < 2:4974692/150‑1 (MQ=255) cGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTgg < 1:892027/150‑1 (MQ=255) cGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTgg > 2:2924112/1‑150 (MQ=255) gggAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGAGAGTGCTGAAGGAGTCTggg > 2:1596679/1‑150 (MQ=255) aGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCCAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTgggcggg < 2:208812/150‑1 (MQ=255) gTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCa > 2:4054812/1‑150 (MQ=255) ttACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATATCAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCaa > 2:4530189/1‑150 (MQ=255) tACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAAt < 2:2452861/150‑1 (MQ=255) tACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGAGAGTGCTGAAGGAGTCTGGGCGGGCAAt > 1:314772/1‑150 (MQ=255) aCATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAAtt < 2:1114211/150‑1 (MQ=255) aCATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAAtt < 1:682899/150‑1 (MQ=255) aTTACTTTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTgg < 2:167841/150‑1 (MQ=255) ttACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGt < 1:714248/150‑1 (MQ=255) tACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAATAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGta > 2:481675/1‑150 (MQ=255) tACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGta < 2:4123151/150‑1 (MQ=255) aCTGTAAACATGATTAAAGTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGtat < 1:2956815/150‑1 (MQ=255) tGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATaa < 1:4115147/150‑1 (MQ=255) gTAAACATGATTAAATTCCTGTGACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAACAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAAc < 2:1927654/150‑1 (MQ=255) tAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGAGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAAcc < 1:2725701/150‑1 (MQ=255) aaaCATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCa > 2:3063545/1‑150 (MQ=255) aaaCATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGAGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCa > 1:2558639/1‑150 (MQ=255) aCATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAAt < 2:3734106/150‑1 (MQ=255) aCATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAAt < 1:3037343/150‑1 (MQ=255) aCATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAAt > 1:4190913/1‑150 (MQ=255) aTGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAAtgt < 1:24294/150‑1 (MQ=255) aTGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAAtgt > 2:4885926/1‑150 (MQ=255) tGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAAtgtg < 2:206058/150‑1 (MQ=255) aaaTTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATa < 1:3423204/150‑1 (MQ=255) aaaTTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGAGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATa > 1:4591181/1‑150 (MQ=255) ttCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATaaaa > 1:1393428/1‑150 (MQ=255) ccTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGAGGGCAATTGGTATAACCAATGTGAAATAAAACa > 2:3101184/1‑150 (MQ=255) cTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACaa > 1:1574524/1‑150 (MQ=255) tGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAat < 1:2871460/150‑1 (MQ=255) tACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAattat > 1:1965986/1‑150 (MQ=255) tACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAattat < 1:4396455/150‑1 (MQ=255) cTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTAttt > 2:336614/1‑150 (MQ=255) gATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACa > 1:164279/1‑150 (MQ=255) aTTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACaa > 2:1497662/1‑150 (MQ=255) ttGGATTCCATGTCACATATGTGGCAAAACATTTCAGGTTGATTTTAAGAATCTGTTGCAAAAGGGAGTTATAACATAAGGGGAGTGATGAAGTAGTCTGGGCGGGAAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAaat < 2:2688189/150‑1 (MQ=255) ggCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAaataa < 1:4965579/150‑1 (MQ=255) tGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTa > 1:1873867/1‑150 (MQ=255) gCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTAt < 1:1774162/150‑1 (MQ=255) ccAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATc < 1:3995913/150‑1 (MQ=255) cAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCa < 1:96865/150‑1 (MQ=255) aGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCAt > 1:1828802/1‑150 (MQ=255) ggTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCAtt > 2:2323956/1‑150 (MQ=255) ggTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCAtt < 2:1717760/150‑1 (MQ=255) gTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTa > 2:26193/1‑150 (MQ=255) tCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTag < 2:4200345/150‑1 (MQ=255) cacaTATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTaga < 2:3276851/150‑1 (MQ=255) cacaTATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTaga > 1:3533224/1‑150 (MQ=255) caTATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGt < 2:544482/150‑1 (MQ=255) caTATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGt < 2:672261/150‑1 (MQ=255) caTATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGt < 1:4544186/150‑1 (MQ=255) tGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACa < 1:533539/150‑1 (MQ=255) gTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACaa > 1:4937336/1‑150 (MQ=255) tGCAATACATTTAAGGTTGATTTTAAGAAGCTGTTGCAAAAGGTCGTTATAACAATTGGGGAGTGCTGTAGTAGTCTGGTCGTGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACt < 2:5157694/150‑1 (MQ=255) cAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTgg > 2:1030120/1‑150 (MQ=255) aaaCATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGt > 2:961292/1‑150 (MQ=255) aaCATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGtg > 2:1344670/1‑150 (MQ=255) aaCATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGtg > 2:3532206/1‑150 (MQ=255) tatCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGtgatga < 1:3399158/150‑1 (MQ=255) tGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATaa < 2:820407/150‑1 (MQ=255) aTTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTTAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAg < 2:1868700/150‑1 (MQ=255) tttAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGTAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGAc < 2:3778942/150‑1 (MQ=255) tAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTc < 2:2000280/150‑1 (MQ=255) tAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTc < 2:3876811/150‑1 (MQ=255) gaagCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCAtt > 1:3702753/1‑150 (MQ=255) aagCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTa > 1:1244956/1‑150 (MQ=255) cTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCt < 1:462060/150‑1 (MQ=255) tGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAAt < 2:1272171/150‑1 (MQ=255) cAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCg < 1:3943494/150‑1 (MQ=255) aaaaGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGCATCgt > 2:5101029/1‑150 (MQ=255) aaaaGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCgt > 1:5046944/1‑150 (MQ=255) aaaGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCgtg < 1:4739285/150‑1 (MQ=255) caGGGAGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCgtgt < 2:4603163/149‑1 (MQ=255) aaGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAATACTCATTAGCTGAATCgtgt > 1:4810753/1‑150 (MQ=255) aaGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCgtgt > 1:21719/1‑150 (MQ=255) aGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCGTGTa < 1:2422494/150‑1 (MQ=255) aGGGCGATATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCGTGTa < 2:4016341/150‑1 (MQ=255) ggCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCGTGTAAg > 2:437449/1‑150 (MQ=255) cGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCGTGTAAGaa < 2:1898055/150‑1 (MQ=255) aCAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGATAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAATAGa < 1:3275452/150‑1 (MQ=255) aCAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAATAGa > 2:3547016/1‑150 (MQ=255) aCAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAATAGa > 1:2697720/1‑150 (MQ=255) aaaaGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAATAGAAt < 2:4736514/150‑1 (MQ=255) aaGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAATAGAAttt < 2:2493291/150‑1 (MQ=255) ggggAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAATAGAATTtat > 1:1039184/1‑150 (MQ=255) ggggAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAATAGAATTtat < 1:1195399/150‑1 (MQ=255) | AAAGTGTGTGGGCATTTTACGGGAAGGTTACATTACTGTAAACATGATTAAATTCCTGTTACTTGGATTTGGCTGCCAGGTCACATATGTTGCAAAACATATCAGGTTGATTTTAAGAAGCTGTTGCAAAAGGGCGTTATAACAAAAGGGGAGTGCTGAAGGAGTCTGGGCGGGCAATTGGTATAACCAATGTGAAATAAAACAATTATTTAACAAATAATTATCATTAGAGTGACAACTGGGTGATGAGAAAATAAAGACTCATTAGCTGAATCGTGTAAGAAAAATAGAATTTATAA > CP009273/447103‑447401 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |