| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 641,886 | C→A | 45.8% | E51* (GAG→TAG) | citT ← | citrate:succinate antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 641,886 | 0 | C | A | 45.8% | 243.4 / inf | 360 | E51* (GAG→TAG) | citT | citrate:succinate antiporter |
| Reads supporting (aligned to +/- strand): ref base C (109/85); new base A (91/75); total (200/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 365 total aligned reads displayed.
GGAAAAACCAGCCAGGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCTTTTGCTAAAGACA > CP009273/641737‑642035 | aaaaCCAGCCAGGCCCAATTTCAGCGCCTGTTTTTGAGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATAACTGACAATAACGCAAATAGAAACCGAAATAAAACTGAACGCTGTTGCCGGAATTGTCTagag > 1:2212473/1‑150 (MQ=255) aaCCAGCCAGGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGa < 1:1968401/150‑1 (MQ=255) ccagccagGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATc > 1:3281393/1‑150 (MQ=255) agGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCg < 1:371503/150‑1 (MQ=255) gCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGAc > 1:4378302/1‑150 (MQ=255) cATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATc > 1:5142013/1‑150 (MQ=255) cATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATc > 1:2023157/1‑150 (MQ=255) aTTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAAGTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCa < 1:1785313/150‑1 (MQ=255) tttCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCAt < 1:3512257/150‑1 (MQ=255) ttCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCAtt < 1:2495650/150‑1 (MQ=255) ttCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCAtt > 2:111775/1‑150 (MQ=255) cAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGc > 2:372183/1‑150 (MQ=255) aGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGcc > 1:2588499/1‑150 (MQ=255) aGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGcc > 2:5481001/1‑150 (MQ=255) aGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCAGGAATTGGCTAGAGGATCATGCCGACAATCATTGcc > 2:1588931/1‑150 (MQ=255) gcCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCcaca < 1:4007552/150‑1 (MQ=255) cTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACaaa > 2:1229932/1‑150 (MQ=255) ttGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGc > 2:4563206/1‑150 (MQ=255) ttGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGc > 1:545317/1‑150 (MQ=255) gcATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAg > 1:2854155/1‑150 (MQ=255) cATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGACTTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGt > 2:4966640/1‑150 (MQ=255) cATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGt < 1:761383/150‑1 (MQ=255) cATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGt > 2:2138866/1‑150 (MQ=255) aTTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTa < 2:4458563/150‑1 (MQ=255) aTTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTa < 1:4165489/150‑1 (MQ=255) ttAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTaa > 1:4766704/1‑150 (MQ=255) tAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAat < 1:5254358/150‑1 (MQ=255) aCGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAatgcc < 2:874868/150‑1 (MQ=255) tGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAatgccatgc > 1:1468212/1‑150 (MQ=255) gggTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAatgccatgcc > 2:2096110/1‑150 (MQ=255) ggTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCt < 2:2230874/150‑1 (MQ=255) tAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCTGGCCGACACTCTGTGCCACAAGCACTGCGAGGTAATGCCTGGCGGGcggcgg > 1:3944256/1‑150 (MQ=255) tAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGcggcgg > 1:1692299/1‑150 (MQ=255) tAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGcggcgg > 1:1068301/1‑150 (MQ=255) aaTTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCggcggc > 2:3068098/1‑150 (MQ=255) ttCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCAt < 1:267392/150‑1 (MQ=255) tCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATa < 1:871519/150‑1 (MQ=255) tttGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATAcc < 1:5201261/150‑1 (MQ=255) tGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGt > 1:3628533/1‑150 (MQ=255) aTCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCggg > 1:3049071/1‑150 (MQ=255) aTCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGAAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATTCCATGCCTGCGGCGGCATACCGTCggg > 1:5538934/1‑150 (MQ=255) aaGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACa < 1:4587487/150‑1 (MQ=255) aaGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACa > 2:3339430/1‑150 (MQ=255) aaGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACa < 2:4385491/150‑1 (MQ=255) aaGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACa > 1:236723/1‑150 (MQ=255) gagCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAgg > 2:1819823/1‑150 (MQ=255) agCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCTAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGAGGCGGCATACCGACGGGGACAggg > 2:3517476/1‑150 (MQ=255) agCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAGGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAggg > 1:101931/1‑150 (MQ=255) agCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAggg < 1:2559943/150‑1 (MQ=255) ggTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGGAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATaa > 2:3800399/1‑150 (MQ=255) ggTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATaa > 1:4461677/1‑150 (MQ=255) tAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGa < 2:3178701/150‑1 (MQ=255) aTTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGaaa < 2:3611238/150‑1 (MQ=255) tACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACa > 2:5662112/1‑150 (MQ=255) tACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACa < 2:2709182/150‑1 (MQ=255) tGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGa > 1:3117909/1‑150 (MQ=255) gCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGac > 2:1055546/1‑150 (MQ=255) aaCGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCAt > 2:1035655/1‑150 (MQ=255) aaCGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCAt > 2:5135870/1‑150 (MQ=255) aCGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATc < 2:4871143/150‑1 (MQ=255) cGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATca < 2:5255969/150‑1 (MQ=255) gCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATcac < 1:3349472/150‑1 (MQ=255) gCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATcac > 1:1519100/1‑150 (MQ=255) gCAAATAGTAACCGCAATAAAACTGATCGATGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATcac > 2:1562130/1‑150 (MQ=255) cAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGATCGAGGATCATGCCGACAATCATTGCCACAAACCCAGCGACGTCATGCCATGCCTGCGGCGGCATACAGTCGGGGGCGGGGCTCAGAACCTTGACGccccgcacg > 2:3825151/1‑144 (MQ=255) aaTAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATcaccac < 1:3555973/150‑1 (MQ=255) aaTAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATcaccac > 1:3162066/1‑150 (MQ=255) aaTAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATcaccac > 2:2350481/1‑150 (MQ=255) tAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCAccacca < 2:4067648/150‑1 (MQ=255) gTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGt > 1:1737745/1‑150 (MQ=255) gTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGt < 2:5024096/150‑1 (MQ=255) gTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGt < 1:1583797/150‑1 (MQ=255) aaCCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTgg < 2:702859/150‑1 (MQ=255) aaCCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGAgg > 2:3654886/1‑150 (MQ=255) aCCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGCCAGGGATAAGAAACATGACACCCATCACCACCAGTggg > 1:1228705/1‑150 (MQ=255) ccGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTgggg > 2:2619412/1‑150 (MQ=255) ccGCAATAAAACTGATCGATGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAATTAATGACATGCCTGCGGCGGCATACCGTCGCGGACAGGGATAAGAAACATGACACCCATCACCACCAGTgggg > 2:4747460/1‑150 (MQ=255) cGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGc < 2:800151/150‑1 (MQ=255) aaTAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCaa > 1:44167/1‑150 (MQ=255) aaTAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCaa > 2:2470059/1‑150 (MQ=255) tAAAACTGATCGCTGTTGCCGGACTTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATa < 2:4272296/150‑1 (MQ=255) tAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATa > 2:4990423/1‑150 (MQ=255) tAAAACTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATa < 2:1468507/150‑1 (MQ=255) aaaCTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGt > 2:4195334/1‑150 (MQ=255) aCTGATCGCTGTTGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGttt < 2:3281393/150‑1 (MQ=255) tGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTcc > 2:1340088/1‑150 (MQ=255) aTCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCat > 1:1380991/1‑150 (MQ=255) gCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCatata > 2:1866173/1‑150 (MQ=255) cTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACCGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCatatat < 2:2835931/150‑1 (MQ=255) cTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCatatat < 1:2741091/150‑1 (MQ=255) cTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCatatat < 2:4158853/150‑1 (MQ=255) tGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATAtatt < 1:3244419/150‑1 (MQ=255) tGCCGGAATTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATc < 2:5340412/150‑1 (MQ=255) cGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCttt > 1:5666324/1‑150 (MQ=255) ggAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCtttt > 2:5427883/1‑150 (MQ=255) ggAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCtttt > 2:2042585/1‑150 (MQ=255) gAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCTTTTg > 1:470158/1‑150 (MQ=255) gAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCTTTTg < 1:3081220/150‑1 (MQ=255) aTTGGCTAGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCTTTTGCt > 2:301218/1‑150 (MQ=255) tGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCTTTTGCTaa > 2:1654427/1‑150 (MQ=255) | GGAAAAACCAGCCAGGCCCCATTTCAGCGCCTGTTTTTGCGCATTAAACGCTGGGTCAGCTAATTCTTTGGCATCAAAGAGCAGGTAATTACTGCCAATAACGCAAATAGTAACCGCAATAAAACTGATCGCTGTTGCCGGAATTGGCTCGAGGATCATGCCGACAATCATTGCCACAAACACAGCGAAGTAATGCCATGCCTGCGGCGGCATACCGTCGGGGACAGGGATAAGAAACATGACACCCATCACCACCAGTGGGGCCAATAGTTTCCATATATTATCTTTTGCTAAAGACA > CP009273/641737‑642035 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |