| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,105,207 | G→T | 12.3% | pseudogene (243/963 nt) | yghE ← | pseudogene, secretion pathway protein, L‑type protein homology; putative general secretion pathway for protein export (GSP) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,105,207 | 0 | G | T | 12.3% | 1298.1 / 109.7 | 390 | pseudogene (243/963 nt) | yghE | pseudogene, secretion pathway protein, L‑type protein homology; putative general secretion pathway for protein export (GSP) |
| Reads supporting (aligned to +/- strand): ref base G (184/157); new base T (31/18); total (215/175) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 393 total aligned reads displayed.
GTTCAGCGTCTGCGCCAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGT > CP009273/3105059‑3105356 | gTTCAGCGTCTGCGCCAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGa > 2:4904113/1‑150 (MQ=255) ttCAGCGTCTGCGCCAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGAt > 2:3789588/1‑150 (MQ=255) tCAGCGTCTGCGCCAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATg > 2:3852728/1‑150 (MQ=255) aGCGTCTGCGCCAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCTATGCg > 2:3553492/1‑150 (MQ=255) aGCGTCTGCGCCAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCg < 2:1999169/150‑1 (MQ=255) gCGTCTGCGCCAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCgg < 1:3737465/150‑1 (MQ=255) cGTCTGCGCCAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGc > 1:3378216/1‑150 (MQ=255) tCTGCGCCAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAg < 1:5117794/150‑1 (MQ=255) cTGCGCCAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGa > 1:5609387/1‑150 (MQ=255) gcgcCAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCTATGCGGCAGATa < 1:273263/150‑1 (MQ=255) cgcCAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATaa < 2:4089097/150‑1 (MQ=255) gcCAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAAc < 1:2531028/150‑1 (MQ=255) cAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAAccc > 1:3824647/1‑150 (MQ=255) cAGCCCATGCTGATAGCTTGTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAAccc < 2:130665/150‑1 (MQ=255) cATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTgc < 2:247607/150‑1 (MQ=255) tGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATc > 1:657516/1‑150 (MQ=255) gATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCg > 2:4582789/1‑150 (MQ=255) tAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCa > 1:4670030/1‑150 (MQ=255) tCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATa > 1:4254036/1‑150 (MQ=255) tGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAAccc > 2:3344314/1‑150 (MQ=255) gCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCca > 1:2027163/1‑150 (MQ=255) cAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCcac < 2:3653512/150‑1 (MQ=255) aaTGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCcaca > 2:3383207/1‑150 (MQ=255) aaTGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCcaca > 2:4296214/1‑150 (MQ=255) aTGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACaa < 2:614086/150‑1 (MQ=255) tGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAg < 2:765707/150‑1 (MQ=255) gACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAAt > 2:5497087/1‑150 (MQ=255) gACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAAt < 1:5475080/150‑1 (MQ=255) cTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATgg > 2:1128121/1‑150 (MQ=255) cTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCAGCTATGCGGCAGATAACCCGTTGCGCATCGCACGCCATAAACCCACAAGGAATgg > 2:1070684/1‑150 (MQ=255) aCGGTGAGCGATAGCGGTAAATCCTGCTCTTTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGAATTGATCGATGCGGCAGATAACCCGTTGCGCATCGCTAGCCATAAACCGACTAGGATTGGAc < 2:5606133/150‑1 (MQ=255) cGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACa > 1:5552480/1‑150 (MQ=255) ggTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACAt > 2:464611/1‑150 (MQ=255) gTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCTATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATc > 2:3526297/1‑150 (MQ=255) gTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATc > 2:1639595/1‑150 (MQ=255) gTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATc < 1:3155850/150‑1 (MQ=255) ttAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATcc > 2:5444629/1‑150 (MQ=255) tAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCTATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCa > 1:2972489/1‑150 (MQ=255) gCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGt > 1:4802676/1‑150 (MQ=255) gAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTcc > 1:3065829/1‑150 (MQ=255) aaaGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCTATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCg > 2:4562585/1‑150 (MQ=255) aaaGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCTATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCg > 2:1746302/1‑150 (MQ=255) aaaGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCg < 1:1826287/150‑1 (MQ=255) aaGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCgg < 2:2457625/150‑1 (MQ=255) ggTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGcgcg > 2:4468978/1‑150 (MQ=255) tAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGAc > 1:4400607/1‑150 (MQ=255) tAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGAc < 2:4430643/150‑1 (MQ=255) tCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCTATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTa < 1:2605871/150‑1 (MQ=255) tCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTa > 1:2133390/1‑150 (MQ=255) ccTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAg > 2:3232720/1‑150 (MQ=255) cTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAgc > 1:3999100/1‑150 (MQ=255) tGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCTATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAgcg < 2:2281659/150‑1 (MQ=255) tCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCgg < 1:4516043/150‑1 (MQ=255) cATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCTATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCggg > 1:1525659/1‑150 (MQ=255) cATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCggg > 2:4240288/1‑150 (MQ=255) aTTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGt < 1:4874251/150‑1 (MQ=255) aTTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGATCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGt > 1:1899875/1‑150 (MQ=255) tGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGa < 1:2079678/150‑1 (MQ=255) gAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGAt > 1:5389117/1‑150 (MQ=255) cTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCTATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGcc > 2:484603/1‑150 (MQ=255) cTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGcc < 1:3645382/150‑1 (MQ=255) tGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCTATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCg > 1:1294619/1‑150 (MQ=255) tGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCg < 1:1210085/150‑1 (MQ=255) cgcgGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGCCGCGACGGTAGCGCGGGTGATGCCGtttt > 2:2818598/1‑150 (MQ=255) gAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTg > 2:5322571/1‑150 (MQ=255) aCATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCa < 2:416898/150‑1 (MQ=255) tGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAAcc < 2:1382918/150‑1 (MQ=255) tGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAAcc < 1:3540101/150‑1 (MQ=255) gACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCa > 1:499531/1‑150 (MQ=255) cGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTg < 1:950558/150‑1 (MQ=255) cGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTg > 1:3224613/1‑150 (MQ=255) cGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTg < 2:682581/150‑1 (MQ=255) cGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTACCTGCAACCACTg > 1:1477786/1‑150 (MQ=255) aGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTgcgc > 2:4105708/1‑150 (MQ=255) gccagcgccagcCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCa < 2:2951685/150‑1 (MQ=255) gccagcgccagcCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCa < 2:79647/150‑1 (MQ=255) cagcgccagcCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCact > 2:2567964/1‑148 (MQ=255) cagcgccagcCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAAt < 1:2488929/150‑1 (MQ=255) agcgccagcCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTACAACCACTGCGCAATg < 1:2813840/150‑1 (MQ=255) ccagcCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTgc > 1:1050199/1‑150 (MQ=255) cagcCCGGCGCTCCATCCCCGGCATTCATCTATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTgcg < 2:3049650/150‑1 (MQ=255) cagcCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTgcg < 1:222583/150‑1 (MQ=255) cagcCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTgcg > 2:2614681/1‑150 (MQ=255) agcCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTgcgc > 2:3508906/1‑150 (MQ=255) gcCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCa > 2:3815992/1‑150 (MQ=255) ggCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCACTGTTGCGCATATg > 2:1496981/1‑150 (MQ=255) ggCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATg < 2:1550146/150‑1 (MQ=255) cgcTCCATCCCCTGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCt < 2:5184222/150‑1 (MQ=255) ccATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGGTg > 2:5097662/1‑150 (MQ=255) cATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCACTGTTGCGCATATGCTGTTgg > 2:2683142/1‑150 (MQ=255) ccccGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGa < 2:2149425/150‑1 (MQ=255) cccGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGaa > 2:907576/1‑150 (MQ=255) cATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACt < 2:4007269/150‑1 (MQ=255) cATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACt < 1:916205/150‑1 (MQ=255) cATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAAGGTTGCGCATATGCTGTTGGTGAATCACt > 1:5652657/1‑150 (MQ=255) aTTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTg > 2:4735587/1‑150 (MQ=255) aTTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTg > 1:317271/1‑150 (MQ=255) ttCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGc < 1:728605/150‑1 (MQ=255) tCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACg < 2:1470836/150‑1 (MQ=255) gATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGt > 1:3931776/1‑150 (MQ=255) | GTTCAGCGTCTGCGCCAGCCCATGCTGATAGCTTTTCCGGTGCAATGCCGACTACGGTTAGCGAAAGCGGTAAATCCTGCTCATTGAGCTGGGCGCGGAACATGACCGGAGCCAGCGCCAGCCCGGCGCTCCATCCCCGGCATTCATCGATGCGGCAGATAACCCGTTGCGCATCGCAAGCCATAAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGT > CP009273/3105059‑3105356 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |