| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,460,036 | T→A | 5.2% | N17Y (AAT→TAT) | bfr ← | bacterioferritin, iron storage and detoxification protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,460,036 | 0 | T | A | 5.2% | 1069.6 / 37.2 | 307 | N17Y (AAT→TAT) | bfr | bacterioferritin, iron storage and detoxification protein |
| Reads supporting (aligned to +/- strand): ref base T (133/156); new base A (8/8); total (141/166) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.82e-01 | |||||||||||
Only 100 of 313 total aligned reads displayed.
TTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTG > CP009273/3459887‑3460185 | ttCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCAtt < 1:1177532/150‑1 (MQ=255)ttCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCAtt > 1:3786911/1‑150 (MQ=255) ccAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTc < 1:4938003/150‑1 (MQ=255) aGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTccc < 2:699471/150‑1 (MQ=255) gAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCACTGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCa < 2:104721/150‑1 (MQ=255) aaaaaGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCaa > 1:2328533/1‑150 (MQ=255) aaaaGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAAc > 1:3038039/1‑150 (MQ=255) aaaaGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAAc < 1:4881169/150‑1 (MQ=255) aaaGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATATCCCAACa > 2:3076475/1‑150 (MQ=255) aaGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAg < 2:23494/150‑1 (MQ=255) aaTGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGttt < 1:3250060/150‑1 (MQ=255) aTGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTttg > 2:3370183/1‑150 (MQ=255) gcTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTga > 2:1316418/1‑150 (MQ=255) cAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGAt > 1:1772498/1‑150 (MQ=255) cAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGAt < 1:539606/150‑1 (MQ=255) ataACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAAtt > 1:1982298/1‑150 (MQ=255) aaCGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTta < 1:1664500/150‑1 (MQ=255) cGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTtata > 2:1120964/1‑150 (MQ=255) cGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTtata < 1:3692597/150‑1 (MQ=255) tCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACt < 2:1451548/150‑1 (MQ=255) tCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACt < 1:2404551/150‑1 (MQ=255) cGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACtt < 2:4374184/150‑1 (MQ=255) ggCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACttt > 2:642998/1‑150 (MQ=255) ggCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACttt > 2:3264959/1‑150 (MQ=255) gCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATATCCCAACAGTTTGTTGAGATAATTTATAACTTTa < 1:794792/150‑1 (MQ=255) gtTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTAt < 1:4666207/150‑1 (MQ=255) catctcatcAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCAcc < 1:4017678/150‑1 (MQ=255) catctcatcAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTATGTTGAGATAATTTATAACTTTAGTATAAcc > 1:3811178/1‑150 (MQ=255) tctcatcAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCtt < 2:205791/150‑1 (MQ=255) tcatcaATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTc > 1:3314772/1‑150 (MQ=255) atcaATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCAt < 1:3568687/150‑1 (MQ=255) aaTGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCAtttt < 2:4157658/150‑1 (MQ=255) ggATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTg > 1:4177572/1‑150 (MQ=255) ggATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTg > 1:1338454/1‑150 (MQ=255) aTTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGAc > 2:1603375/1‑150 (MQ=255) cATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTcc > 1:4851845/1‑150 (MQ=255) cATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTcc < 2:1534716/150‑1 (MQ=255) gATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTc < 2:2723765/150‑1 (MQ=255) gATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTc < 2:2209010/150‑1 (MQ=255) gATACTACACATCATTGAGACGTTTGAGACCCCAGTTATTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTc < 2:3803834/150‑1 (MQ=255) cTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCtt > 2:1820755/1‑150 (MQ=255) ccACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTcc < 2:4486480/150‑1 (MQ=255) cacaTCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCa < 2:5604141/150‑1 (MQ=255) acaTCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTATTGACTCCTTCGCTTCCAc > 2:4700750/1‑150 (MQ=255) catcatTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCAct > 2:1376962/1‑150 (MQ=255) atcatTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCActc > 1:2318844/1‑150 (MQ=255) atcatTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCActc > 1:4570435/1‑150 (MQ=255) catTGAGACGTTTGAGACCCCAGTTTTTAAACATTCTGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCtt > 1:5386573/1‑150 (MQ=255) ttGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTg < 1:2368613/150‑1 (MQ=255) gagaCGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGaa < 1:4885940/150‑1 (MQ=255) cGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGt < 1:2251320/150‑1 (MQ=255) cGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGt < 1:3817784/150‑1 (MQ=255) tttGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAg < 1:2199039/150‑1 (MQ=255) agaCCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATATTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACg > 2:515025/1‑150 (MQ=255) agaCCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATATCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACg > 1:3988830/1‑150 (MQ=255) aCCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGc > 2:2190956/1‑150 (MQ=255) cccAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCtt < 2:4206611/150‑1 (MQ=255) ccAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTa > 1:1854334/1‑150 (MQ=255) ccAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTa > 1:3804126/1‑150 (MQ=255) cAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTAc < 2:2652636/150‑1 (MQ=255) cAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTAc < 1:5115110/150‑1 (MQ=255) cAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTAc < 1:4306794/150‑1 (MQ=255) aGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGACCGGCTTACg > 1:3475737/1‑150 (MQ=255) ttttAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGt > 2:4965686/1‑150 (MQ=255) ttttAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGt > 1:90746/1‑150 (MQ=255) ttAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTaa < 1:3264959/150‑1 (MQ=255) ttAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTaa > 2:4199974/1‑150 (MQ=255) aaaCATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGt > 2:2413174/1‑150 (MQ=255) aaCATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTc > 1:529827/1‑150 (MQ=255) cATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCaa > 1:3388016/1‑150 (MQ=255) gggCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAac > 2:116090/1‑150 (MQ=255) gggCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAac < 2:3810885/150‑1 (MQ=255) ggCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAaca > 1:283052/1‑150 (MQ=255) ggCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATATCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAaca < 1:3076475/150‑1 (MQ=255) ggCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATATCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAaca < 1:213878/150‑1 (MQ=255) aTGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAacacac > 1:5051259/1‑150 (MQ=255) gagaAAGTACTGATTGATTGCGACAAGCTCATGTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCCCCTTTCATATTATGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTcc < 2:3914082/150‑1 (MQ=255) agaAAGTACTGATTGATTGCGACAAGCTCATATCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCg > 2:330979/1‑150 (MQ=255) aaaGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGtt < 2:2119142/150‑1 (MQ=255) aaGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGttt > 2:2962555/1‑150 (MQ=255) gTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTAt < 2:3595054/150‑1 (MQ=255) gTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTAt < 1:5477655/150‑1 (MQ=255) gTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCATTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTAt < 2:2761038/150‑1 (MQ=255) cTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCg > 1:969718/1‑150 (MQ=255) tgattgCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTGTATGCGGACTc > 1:651048/1‑150 (MQ=255) gattgCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAATCACACTCCGTTTATGCGGACTcc > 2:819651/1‑150 (MQ=255) gattgCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTcc > 2:3667056/1‑150 (MQ=255) gattgCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTcc > 1:1480259/1‑150 (MQ=255) ttgCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCtt < 1:5588629/150‑1 (MQ=255) ttgCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCtt > 2:4775618/1‑150 (MQ=255) tgCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTa > 1:4844510/1‑150 (MQ=255) cGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTaaa > 2:5236033/1‑150 (MQ=255) aCAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACt < 1:1015743/150‑1 (MQ=255) aCAAGCTCATGTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACt < 1:4924563/150‑1 (MQ=255) cAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTc > 2:2817043/1‑150 (MQ=255) aaGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTcc > 1:4993712/1‑150 (MQ=255) cTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGc > 2:3758995/1‑150 (MQ=255) tCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGAGGACTCCTTAAACTCCGGCa > 2:4295287/1‑150 (MQ=255) ttCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTGGGGGCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTg > 1:440045/1‑150 (MQ=255) ttCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTg > 1:4819004/1‑150 (MQ=255) | TTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCCCAGTTTTTAAACATTCGGGCATGGAGAAAGTACTGATTGATTGCGACAAGCTCATTTCCCAACAGTTTGTTGAGATAATTTATAACTTTAGTATCACCTTTCATTTTTTGACTCCTTCGCTTCCACTCTTTGAAGAGTAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTG > CP009273/3459887‑3460185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |