Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,787,087 T→C 7.6% intergenic (‑44/‑260) yibB ← / → hldD YibB family protein, function unknown/ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,787,0870TC 7.6% 867.5 / 43.9 261intergenic (‑44/‑260)yibB/hldDYibB family protein, function unknown/ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding
Reads supporting (aligned to +/- strand):  ref base T (109/132);  new base C (10/10);  total (119/142)
Fisher's exact test for biased strand distribution p-value = 8.16e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 274 total aligned reads displayed.

AAACATCAACTGAACGAGCTAGTTTTTCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTA  >  CP009273/3786938‑3787236
                                                                                                                                                     |                                                                                                                                                     
aaaCATCAACTGAACGAGCTAGTTTTTCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAat                                                                                                                                                       >  1:2863226/1‑150 (MQ=255)
  aCATCAACTGAACGAGCTAGTTTTTCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAatat                                                                                                                                                     <  1:5671413/150‑1 (MQ=255)
   cATCAACTGAACGAGCTAGTTTTTCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATAtt                                                                                                                                                    <  2:922184/150‑1 (MQ=255)
     tCAACTGAACGAGCTAGTTTTTCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTaa                                                                                                                                                  >  1:5318312/1‑150 (MQ=255)
      cAACTGAACGAGCTAGTTTTTCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAAt                                                                                                                                                 <  1:2858799/150‑1 (MQ=255)
      cAACTGAACGAGCTAGTTTTTCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAAt                                                                                                                                                 >  2:5525460/1‑150 (MQ=255)
        aCTGAACGAGCTAGTTTTTCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAg                                                                                                                                               <  2:4228431/150‑1 (MQ=255)
             aCGAGCTAGTTTTTCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGt                                                                                                                                          >  1:4610778/1‑150 (MQ=255)
               gAGCTAGTTTTTCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGtat                                                                                                                                        >  1:1782293/1‑150 (MQ=255)
                aGCTAGTTTTTCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGtata                                                                                                                                       >  1:4029015/1‑150 (MQ=255)
                 gCTAGTTTTTCACGGAACCCTTTATTAGCAGTCCAATCCCCTATACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATAc                                                                                                                                      <  2:1384292/150‑1 (MQ=255)
                  cTAGTTTTTCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACt                                                                                                                                     <  2:2525477/150‑1 (MQ=255)
                        tttCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTatat                                                                                                                               <  1:3836579/150‑1 (MQ=255)
                         ttCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTAtatt                                                                                                                              <  1:1144383/150‑1 (MQ=255)
                          tCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTAtatta                                                                                                                             <  1:634240/150‑1 (MQ=255)
                          tCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAACATTAATAGAATGTATACTGTAtatta                                                                                                                             >  2:1359798/1‑150 (MQ=255)
                             cGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATTCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATcc                                                                                                                          <  2:2098075/150‑1 (MQ=255)
                             cGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATcc                                                                                                                          <  2:2921689/150‑1 (MQ=255)
                              ggAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCa                                                                                                                         >  1:1390186/1‑150 (MQ=255)
                                aaCCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCAtt                                                                                                                       >  1:4452773/1‑150 (MQ=255)
                                aaCCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCAtt                                                                                                                       >  2:555316/1‑150 (MQ=255)
                                 aCCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTc                                                                                                                      >  1:2959049/1‑150 (MQ=255)
                                 aCCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTc                                                                                                                      >  2:4401789/1‑150 (MQ=255)
                                        attaGGAGTCCACTCCCCTCTCCCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCt                                                                                                               <  2:2094766/150‑1 (MQ=255)
                                        attaGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCt                                                                                                               >  1:5227483/1‑150 (MQ=255)
                                          taGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTc                                                                                                             <  2:1186461/150‑1 (MQ=255)
                                          taGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTc                                                                                                             <  1:9602/150‑1 (MQ=255)
                                          taGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTc                                                                                                             <  2:3931355/150‑1 (MQ=255)
                                          taGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAACATTAATAGAATGTATACTGTCTATTATCCATTCAAATGCTTc                                                                                                             >  1:5481467/1‑150 (MQ=255)
                                           aGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTcc                                                                                                            <  1:5076673/150‑1 (MQ=255)
                                                tCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGttat                                                                                                       >  2:581228/1‑150 (MQ=255)
                                                tCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAACATTAATAGAATGTATACTGTATATTATCCATTCAATTGATTCCGttat                                                                                                       >  2:3723375/1‑150 (MQ=255)
                                                 ccAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGttatt                                                                                                      <  2:3772162/150‑1 (MQ=255)
                                                  cAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTTTATATTATCAATTCAAATGATTCCGttattt                                                                                                     >  1:5579452/1‑150 (MQ=255)
                                                   aaTCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAATTATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGttattta                                                                                                    >  2:3763328/1‑150 (MQ=255)
                                                    aTCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGttatttat                                                                                                   >  1:5290890/1‑150 (MQ=255)
                                                      ccccTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAACAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCa                                                                                                 <  2:1517985/150‑1 (MQ=255)
                                                        ccTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATa                                                                                               >  2:1231297/1‑150 (MQ=255)
                                                         ctctACCAATGTCAAAATATGCAGTTATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATAc                                                                                              <  2:519691/150‑1 (MQ=255)
                                                            tACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATc                                                                                           <  2:900019/150‑1 (MQ=255)
                                                             aCCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCg                                                                                          <  1:5666964/150‑1 (MQ=255)
                                                              ccAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCgg                                                                                         <  1:3119746/150‑1 (MQ=255)
                                                              ccAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAACATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCgg                                                                                         >  1:2565337/1‑150 (MQ=255)
                                                                  tGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAata                                                                                     >  1:2699171/1‑150 (MQ=255)
                                                                  tGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAACATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAata                                                                                     <  1:2084040/150‑1 (MQ=255)
                                                                   gTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAatat                                                                                    <  2:307345/150‑1 (MQ=255)
                                                                   gTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAatat                                                                                    <  1:4847164/150‑1 (MQ=255)
                                                                      aaaaTATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGa                                                                                 >  1:4938157/1‑150 (MQ=255)
                                                                         atatGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATAc                                                                              >  1:4189898/1‑150 (MQ=255)
                                                                          tatGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACt                                                                             <  2:103731/150‑1 (MQ=255)
                                                                          tatGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAACATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACt                                                                             <  2:190093/150‑1 (MQ=255)
                                                                            tGCAGTGGTAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTaa                                                                           <  1:4063356/150‑1 (MQ=255)
                                                                             gCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTaaa                                                                          >  1:3481097/1‑150 (MQ=255)
                                                                               aGTGATAATTGTTGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGc                                                                        <  2:5122515/150‑1 (MQ=255)
                                                                               aGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGc                                                                        >  1:1204972/1‑150 (MQ=255)
                                                                               aGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGc                                                                        >  1:4761323/1‑150 (MQ=255)
                                                                                gTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCa                                                                       <  1:4930253/150‑1 (MQ=255)
                                                                                   aTAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTa                                                                    <  2:4502268/150‑1 (MQ=255)
                                                                                    tAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTAt                                                                   <  2:2736854/150‑1 (MQ=255)
                                                                                     aaTTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTAtt                                                                  >  1:665402/1‑150 (MQ=255)
                                                                                      aTTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTc                                                                 <  2:493756/150‑1 (MQ=255)
                                                                                      aTTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTc                                                                 <  1:1937805/150‑1 (MQ=255)
                                                                                       ttGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTca                                                                <  1:254978/150‑1 (MQ=255)
                                                                                         gtggttGATGATTTCATTACTAATAATAACATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTcaca                                                              <  2:4580731/150‑1 (MQ=255)
                                                                                         gtggtgGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTcaca                                                              <  2:1754705/150‑1 (MQ=255)
                                                                                         gtggtgGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTcaca                                                              >  1:3667392/1‑150 (MQ=255)
                                                                                          tggtggATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACAt                                                             <  1:3561936/150‑1 (MQ=255)
                                                                                             tggATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCa                                                          >  2:5238769/1‑150 (MQ=255)
                                                                                              tgatgatTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCaa                                                         >  2:1076295/2‑150 (MQ=255)
                                                                                                atgatTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCaaaa                                                       <  2:218154/150‑1 (MQ=255)
                                                                                                 tgatTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAAc                                                      >  2:1477538/1‑150 (MQ=255)
                                                                                                  gatTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAAcc                                                     <  1:5402988/150‑1 (MQ=255)
                                                                                                  gatTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAAcc                                                     <  2:1683149/150‑1 (MQ=255)
                                                                                                     ttCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAAc                                                  <  2:5318312/150‑1 (MQ=255)
                                                                                                      tCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACa                                                 >  1:3719596/1‑150 (MQ=255)
                                                                                                      tCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAACATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACa                                                 <  2:2464582/150‑1 (MQ=255)
                                                                                                         ttACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATcc                                              >  1:325577/1‑150 (MQ=255)
                                                                                                          tACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATGCATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCg                                             <  2:4000721/150‑1 (MQ=255)
                                                                                                           aCTAATAAGACCATGAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCTGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGc                                            <  2:2475494/150‑1 (MQ=255)
                                                                                                              aataaGACCATTAATATAAAAAAAGAATTATATCATAAACATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCAt                                         >  1:3938916/1‑150 (MQ=255)
                                                                                                                  aGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAg                                     <  1:5166717/150‑1 (MQ=255)
                                                                                                                    aCCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGa                                   >  2:5359247/1‑150 (MQ=255)
                                                                                                                      cATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACt                                 >  2:4779517/1‑150 (MQ=255)
                                                                                                                       aTTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTa                                >  2:1424268/1‑150 (MQ=255)
                                                                                                                           atatAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTa                            >  1:2465436/1‑150 (MQ=255)
                                                                                                                           atatAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTa                            >  1:1960506/1‑150 (MQ=255)
                                                                                                                               aaaaaaaGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAAc                        >  1:3449793/1‑150 (MQ=255)
                                                                                                                               aaaaaaaGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAAc                        >  1:375700/1‑150 (MQ=255)
                                                                                                                                aaaaaaGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAAcc                       <  1:132707/150‑1 (MQ=255)
                                                                                                                                 aaaaaGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAAccc                      <  2:4988603/150‑1 (MQ=255)
                                                                                                                                     aGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAAc                  <  1:4532672/150‑1 (MQ=255)
                                                                                                                                      gAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATCCTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACt                 >  2:2132178/1‑150 (MQ=255)
                                                                                                                                       aaTTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCAGCCATGAAGGACTAGCTAAAACCCAAACTa                >  1:1564443/1‑150 (MQ=255)
                                                                                                                                        aTTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAg               >  2:3125802/1‑150 (MQ=255)
                                                                                                                                              tCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTttgtt         >  1:2296167/1‑150 (MQ=255)
                                                                                                                                               cATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTttgttg        <  2:3395275/150‑1 (MQ=255)
                                                                                                                                                   aaTATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAAt    >  2:5428003/1‑150 (MQ=255)
                                                                                                                                                    atatTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAAtt   >  2:2362879/1‑150 (MQ=255)
                                                                                                                                                    atatTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAAtt   >  1:4294654/1‑150 (MQ=255)
                                                                                                                                                     tatTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCACCATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTa  <  2:3576273/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AAACATCAACTGAACGAGCTAGTTTTTCACGGAACCCTTTATTAGCAGTCCAATCCCCTCTACCAATGTCAAAATATGCAGTGATAATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTA  >  CP009273/3786938‑3787236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: