Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 3,850,839 | G→T | 39.7% | P309Q (CCG→CAG) | yidJ ← | sulfatase/phosphatase superfamily protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 3,850,839 | 0 | G | T | 39.7% | 411.8 / inf | 349 | P309Q (CCG→CAG) | yidJ | sulfatase/phosphatase superfamily protein |
Reads supporting (aligned to +/- strand): ref base G (97/113); new base T (71/68); total (168/181) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.83e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 353 total aligned reads displayed.
TGGCTCTTTCACGGCAAGGATATTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCA > CP009273/3850691‑3850988 | ggCTCTTTCACGGCAAGGATATTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGa > 2:2989564/1‑150 (MQ=255) tctTTCACGGCAAGGATATTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATg < 1:3680812/150‑1 (MQ=255) tctTTCACGGCAAGGATATTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATg > 1:2210133/1‑150 (MQ=255) ttCACGGCAAGGATATTGTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCgg < 2:4950229/150‑1 (MQ=255) tCACGGCAAGGATATTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCggg > 1:1032503/1‑150 (MQ=255) cACGGCAAGGATATTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTACATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGt < 2:4234762/150‑1 (MQ=255) aCGGCAAGGATATTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTg > 2:5320172/1‑150 (MQ=255) ggCAAGGATATTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGAt > 1:4047470/1‑150 (MQ=255) cAATGATATTTTCCCCCGTCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATgt < 1:1633569/150‑1 (MQ=255) aaGGATATTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATgtc > 2:4977339/1‑150 (MQ=255) atatTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCa > 1:1326034/1‑150 (MQ=255) atatTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCa > 2:3655132/1‑150 (MQ=255) atatTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCa < 1:825874/150‑1 (MQ=255) tatTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCAt > 2:4348610/1‑150 (MQ=255) tatTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTAGTCAt < 2:2156514/150‑1 (MQ=255) atTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATa < 2:3744174/150‑1 (MQ=255) ttttCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATAc > 1:1694747/1‑150 (MQ=255) tCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATc > 1:484561/1‑150 (MQ=255) tCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATc < 2:671665/150‑1 (MQ=255) tCCCACGTCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATc < 2:3517434/150‑1 (MQ=255) cccccGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATcg > 1:1223969/1‑150 (MQ=255) cccGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATcgcc < 2:1317408/150‑1 (MQ=255) cAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGcccc < 1:1532587/150‑1 (MQ=255) cAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGcccc < 1:3170081/150‑1 (MQ=255) aGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCt > 2:5151357/1‑150 (MQ=255) aGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCt > 1:3512900/1‑150 (MQ=255) gAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCtn < 2:1691368/150‑2 (MQ=255) aaTCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCttt < 1:4281989/150‑1 (MQ=255) tctcTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTAc < 2:210179/150‑1 (MQ=255) tctcTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTAc > 1:4611891/1‑150 (MQ=255) ctctGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACt > 2:4471758/1‑150 (MQ=255) ctctGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACt > 1:992702/1‑150 (MQ=255) tctGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTg < 1:3477214/150‑1 (MQ=255) tctGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTg < 2:2655268/150‑1 (MQ=255) tGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGAt > 2:504344/1‑150 (MQ=255) tttttCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAg < 1:1215864/150‑1 (MQ=255) tttCAAGATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCt < 2:3964769/150‑1 (MQ=255) ttCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCtt > 2:5109693/1‑150 (MQ=255) ttCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCtt < 2:5295012/150‑1 (MQ=255) cAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTAt < 2:1740038/150‑1 (MQ=255) aaTATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTAtg < 1:4571023/150‑1 (MQ=255) aaTATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTAtg < 1:1959459/150‑1 (MQ=255) tatCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTCtgtg > 2:4566984/1‑150 (MQ=255) tatCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTAtgtg > 2:4566890/1‑150 (MQ=255) cTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTgcgc > 1:3122457/1‑150 (MQ=255) tGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGcc > 2:4067429/1‑150 (MQ=255) tGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGcc > 1:1098738/1‑150 (MQ=255) gCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGccc < 1:800202/150‑1 (MQ=255) cAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCcat > 1:4095495/1‑150 (MQ=255) gcCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCAtt < 2:2041513/150‑1 (MQ=255) ccATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCAttt < 2:1193601/150‑1 (MQ=255) catcatTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTc < 2:1512839/150‑1 (MQ=255) catTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGcc > 1:2029032/1‑150 (MQ=255) atTGTCGGCAGTAAATCGATATGACCGACTGGCTAATCGACCTTTAGCCGATCCCCTTGCGGCGAACGGATGATAAGCTGAATTCGGGTGATGTAGTAATAAATCGCCGACCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGcag > 1:5122896/1‑148 (MQ=255) atTGTCGGCAGTAAATCGATATGACCGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCg > 1:2302501/1‑150 (MQ=255) tGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTg > 1:5347791/1‑150 (MQ=255) gTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGa < 1:4794493/150‑1 (MQ=255) tCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGAt < 1:5244760/150‑1 (MQ=255) cAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGa < 1:2530342/150‑1 (MQ=255) aGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAg > 1:4696558/1‑150 (MQ=255) gTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAgg > 1:301543/1‑150 (MQ=255) aaaTCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGAGCGGAGGta > 1:2577522/1‑150 (MQ=255) aaTCGATCTGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGtat < 1:5082540/150‑1 (MQ=255) cGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTataaa > 1:71562/1‑150 (MQ=255) cGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTataaa < 1:3317185/150‑1 (MQ=255) gATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGCTCATCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGAGCGCCCATCATTTCGCCGTGATCGGAGGTctcaat < 2:1810373/150‑1 (MQ=255) gATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTAATGTGCGCCCATCATTACGCCGTGATCGGAGGtaaagat > 2:3060605/1‑145 (MQ=255) gATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTataaat < 1:550335/150‑1 (MQ=255) tgactgacTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAAcc > 1:3855158/1‑150 (MQ=255) gactgGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGt > 1:5332408/1‑150 (MQ=255) ctgGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTAt < 2:121276/150‑1 (MQ=255) gTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCa > 2:5410196/1‑150 (MQ=255) gTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCa > 1:2319686/1‑150 (MQ=255) gTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCa > 1:5634949/1‑150 (MQ=255) tATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCAc < 2:224166/150‑1 (MQ=255) tATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCAc > 2:3355597/1‑150 (MQ=255) cGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGtt > 2:5539549/1‑150 (MQ=255) ccTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGct < 1:2742134/150‑1 (MQ=255) ccTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGct < 1:29097/150‑1 (MQ=255) ccTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGct < 1:299042/150‑1 (MQ=255) tGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGctct > 2:3690476/1‑150 (MQ=255) tGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGctct < 1:3777615/150‑1 (MQ=255) gTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTg > 2:243436/1‑150 (MQ=255) ccgcTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGt > 1:3965966/1‑150 (MQ=255) cgcTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGATGTATAAATAACCCACGTCTTTTCACGTTGATCTGGCGtt > 2:1871112/1‑150 (MQ=255) cgcTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGtt > 2:769701/1‑150 (MQ=255) gcTCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTa < 1:4402141/150‑1 (MQ=255) cTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTaa < 2:2528532/150‑1 (MQ=255) tCCCCTTGCGGCGAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAg > 2:484205/1‑150 (MQ=255) ccccTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAgg < 1:5291038/150‑1 (MQ=255) cTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCGTACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCAt > 1:2073806/1‑150 (MQ=255) cggcgAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATtgat > 1:186880/1‑150 (MQ=255) ggcgAACGGATGATCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATtgatg > 1:4873094/1‑150 (MQ=255) aaCGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGAccc < 2:2813519/150‑1 (MQ=255) aaCGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGAATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGAacc > 2:2885141/1‑150 (MQ=255) gatgatCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGAc > 1:926933/1‑144 (MQ=255) gatgatCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGAc < 2:926933/144‑1 (MQ=255) gatgatCAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTcc < 2:3248493/150‑1 (MQ=255) cAGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTg < 1:1370401/150‑1 (MQ=255) aGCTGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTgg > 1:238845/1‑150 (MQ=255) | TGGCTCTTTCACGGCAAGGATATTTTCCCCCGGCAGAATCTCTGGTTTTTCAATATCTGCCAGCGCCATCATTGTCGGCAGTAAATCGATATGACTGACTGGCGTATCGACCTGTCGCCGCTCCCCTTGCGGCGAACGGATGATCAGCGGAATGCGGGTGATGTCGTCATACATCGCCGCCCCTTTACTGATCAGCTTATGTGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCA > CP009273/3850691‑3850988 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |