| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,882,760 | T→A | 5.6% | V224E (GTG→GAG) | tnaA → | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,882,760 | 0 | T | A | 5.6% | 1335.6 / 51.2 | 388 | V224E (GTG→GAG) | tnaA | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (194/170); new base A (7/15); total (203/185) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.67e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
Only 100 of 399 total aligned reads displayed.
GATTAGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATGCGATGG > CP009273/3882613‑3882909 | tAGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTaa > 1:5222905/1‑150 (MQ=255) tAGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTaa > 2:4215033/1‑150 (MQ=255) tAGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGGTGCAACCATCACCAGTAACTATGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAACTACGATATTCCGGTGGTaa < 2:499442/150‑1 (MQ=255) aGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAATCGATGTACAGCATCGCGAAGAAATAAGATATTCCGGTGGTCAt > 1:3936439/1‑150 (MQ=255) aGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAAt > 2:2166757/1‑150 (MQ=255) gAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATg > 2:5244669/1‑150 (MQ=255) ggTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTcc > 1:383740/1‑150 (MQ=255) ggTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTcc > 1:779217/1‑150 (MQ=255) ggTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTcc > 2:3906804/1‑150 (MQ=255) ggTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTcc > 2:2325785/1‑150 (MQ=255) gTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTTGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCcg > 1:45077/1‑150 (MQ=255) tATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCcgc > 1:2838968/1‑150 (MQ=255) aagaagTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCt > 2:3189693/1‑150 (MQ=255) agaagTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCgcgcgcgt < 2:2669153/150‑3 (MQ=255) taagTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCttt < 2:2205746/149‑1 (MQ=255) gaagTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCttt > 2:3150321/1‑150 (MQ=255) agTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATAACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGc > 1:2375239/1‑150 (MQ=255) tGGTCCGAATTACGTGCCGTATATCGTTGCAACCATCACAAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGa < 2:3800719/150‑1 (MQ=255) tGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGa < 2:3457814/150‑1 (MQ=255) ggTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGaa > 2:1934983/1‑150 (MQ=255) tCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGaaaa > 1:108518/1‑150 (MQ=255) tCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGaaaa > 1:852253/1‑150 (MQ=255) ccGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAAc < 1:5627045/150‑1 (MQ=255) gAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGc > 1:4956398/1‑150 (MQ=255) gAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGc > 2:4317855/1‑150 (MQ=255) aTAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCt < 1:3111714/150‑1 (MQ=255) aaCGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTAt > 1:3905485/1‑150 (MQ=255) atatCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAagc > 1:28614/1‑150 (MQ=255) atatCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAagc > 2:1374238/1‑150 (MQ=255) atatCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAagc > 2:4548685/1‑150 (MQ=255) tatCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAagca < 1:3711527/150‑1 (MQ=255) ttGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTg > 2:4474200/1‑150 (MQ=255) cAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAg > 1:1947755/1‑150 (MQ=255) aaCCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGc > 1:1498681/1‑150 (MQ=255) aaCCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGc > 1:4932698/1‑150 (MQ=255) aCCATCACCAGTAACTCTGCAGGTTGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACTGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCa < 1:1665118/150‑1 (MQ=255) aTCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACTATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGaa < 2:4759675/150‑1 (MQ=255) aTCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGaa < 2:323019/150‑1 (MQ=255) aTCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGaa > 1:3542647/1‑150 (MQ=255) aCCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATCCGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATAc < 2:561410/150‑1 (MQ=255) ccAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACa < 2:3709567/150‑1 (MQ=255) cAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACaa > 1:4116102/1‑150 (MQ=255) aGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACaaa > 1:503289/1‑150 (MQ=255) aGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACaaa > 2:2763230/1‑150 (MQ=255) gTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAg < 2:3869361/150‑1 (MQ=255) gTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAg < 1:652226/150‑1 (MQ=255) tAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGa > 1:1859330/1‑150 (MQ=255) aaCTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGAc > 2:3532324/1‑150 (MQ=255) ctctGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAAGACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTg < 2:4025614/150‑1 (MQ=255) gCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGAcc > 2:4638559/1‑150 (MQ=255) aGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCAt < 1:4022831/150‑1 (MQ=255) ggtggtCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGACTACAAAGACTGGACCATc < 1:4874279/150‑1 (MQ=255) ggtggtCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATc < 2:576092/150‑1 (MQ=255) ggtCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAg < 1:2488320/150‑1 (MQ=255) gtCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGc > 1:4370941/1‑150 (MQ=255) cAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGAGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAg > 1:4241063/1‑150 (MQ=255) aGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGa > 1:4700119/1‑150 (MQ=255) gCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGAt > 1:421361/1‑150 (MQ=255) ccGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATc < 1:4722709/150‑1 (MQ=255) ccGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATc < 1:4667788/150‑1 (MQ=255) ggTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCAc > 2:1870902/1‑150 (MQ=255) tttCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCAccc < 1:1004884/150‑1 (MQ=255) ttCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCcg < 1:923373/150‑1 (MQ=255) cACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCcgcg > 1:3393428/1‑150 (MQ=255) cTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGaa < 2:1271325/150‑1 (MQ=255) cAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGAGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCt < 1:1620269/150‑1 (MQ=255) aaaCTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTa < 2:1411722/150‑1 (MQ=255) aaCTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTAc < 2:1195515/150‑1 (MQ=255) aCTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGACTCCAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACa > 1:2336695/1‑150 (MQ=255) aCTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACa < 2:2390999/150‑1 (MQ=255) aCTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACa < 1:219149/150‑1 (MQ=255) aaaaGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGAGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAata < 2:3651611/150‑1 (MQ=255) aaaGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAatat > 2:273789/1‑150 (MQ=255) aaaGCGATGGACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAatat < 2:4376182/150‑1 (MQ=255) cGATGTACAGCATCGCGAAGAAATACGATATTCCGGAGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCg < 1:2659472/150‑1 (MQ=255) aTGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGat < 2:209316/150‑1 (MQ=255) aTGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGat > 2:4267660/1‑150 (MQ=255) tGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGata < 2:1635394/150‑1 (MQ=255) aGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTg < 1:428907/150‑1 (MQ=255) gCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTgg < 2:2520610/150‑1 (MQ=255) cATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATTCCGATATGCTGGc > 1:3475132/1‑150 (MQ=255) cATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGc < 1:2017376/150‑1 (MQ=255) gcgAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATg < 2:3050696/150‑1 (MQ=255) gaagaaATACGATATTACGGTGGTAATGGACTCCGCGCTCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTc < 2:5229998/150‑1 (MQ=255) aagaaATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTcc < 1:2634319/150‑1 (MQ=255) aaaTACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGcc > 2:910321/1‑150 (MQ=255) tACGATATTCCGGTGGTAATGGTCTCCGCGCGCTTTGCTTAAATCGCCTAGTTCATCAAGCAGCGTGACGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATCTGCCGATATGCTGGCGATGTCCGCCaag < 1:3830643/150‑1 (MQ=255) aCGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCaaga > 1:2747068/1‑150 (MQ=255) aCGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCaaga > 2:806303/1‑150 (MQ=255) gATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCaagaaa > 2:102630/1‑150 (MQ=255) gATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCaagaaa > 2:5336583/1‑150 (MQ=255) atatTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCaagaaag > 2:2022130/1‑150 (MQ=255) tatTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCaagaaaga > 1:5147397/1‑150 (MQ=255) ttCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATg > 1:5539070/1‑150 (MQ=255) tCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATGc < 1:5426039/150‑1 (MQ=255) tCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATGc < 1:1849015/150‑1 (MQ=255) ccGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATGCg < 2:4894824/150‑1 (MQ=255) ggtggtAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATGCGAt > 2:4180003/1‑150 (MQ=255) ggtggtAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATGCGAt > 2:3838721/1‑150 (MQ=255) gtggtAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATGCGATg > 2:4821340/1‑150 (MQ=255) | GATTAGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATGCGATGG > CP009273/3882613‑3882909 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |