Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,919,832 T→A 8.9% intergenic (‑17/+73) mioC ← / ← asnC FMN‑binding protein MioC/transcriptional activator of asnA; autorepressor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,919,8320TA 8.9% 1267.6 / 89.4 378intergenic (‑17/+73)mioC/asnCFMN‑binding protein MioC/transcriptional activator of asnA; autorepressor
Reads supporting (aligned to +/- strand):  ref base T (142/200);  new base A (11/23);  total (153/225)
Fisher's exact test for biased strand distribution p-value = 3.62e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 393 total aligned reads displayed.

GTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCGGTGGACTGAATTTCATCAATTGTTT  >  CP009273/3919683‑3919981
                                                                                                                                                     |                                                                                                                                                     
gTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTttatt                                                                                                                                                       <  1:1056138/150‑1 (MQ=255)
gTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTttatt                                                                                                                                                       <  1:3899886/150‑1 (MQ=255)
 tAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTttatta                                                                                                                                                      >  2:1389835/1‑150 (MQ=255)
  aaaTCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTaa                                                                                                                                                     <  2:1584552/150‑1 (MQ=255)
      cttctAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGt                                                                                                                                                 <  2:3137834/150‑1 (MQ=255)
        tctAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTgg                                                                                                                                               <  1:1973222/150‑1 (MQ=255)
         ctAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGc                                                                                                                                              <  2:5159750/150‑1 (MQ=255)
         ctAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGc                                                                                                                                              <  2:1829438/150‑1 (MQ=255)
         ctAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCGTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGc                                                                                                                                              <  2:3462378/150‑1 (MQ=255)
             cAGCGGACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTAt                                                                                                                                          >  1:4022729/1‑150 (MQ=255)
             cAGCGGACCGTGCAGCGTTTCGGTGGTAAAAACCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTAt                                                                                                                                          <  2:1266258/150‑1 (MQ=255)
               gCGGACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTg                                                                                                                                        <  2:325411/150‑1 (MQ=255)
                  taCCGTGCAGAGTTTCGGTGGTAAAACCCGCCTATTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGATGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTAc                                                                                                                                     <  1:4510307/149‑1 (MQ=255)
                  gACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTAc                                                                                                                                     >  2:4504361/1‑150 (MQ=255)
                  gACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTAc                                                                                                                                     >  2:2257585/1‑150 (MQ=255)
                  gACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTAc                                                                                                                                     <  1:1645806/150‑1 (MQ=255)
                  gACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTAc                                                                                                                                     >  2:2421234/1‑150 (MQ=255)
                      gTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCtg                                                                                                                                 <  1:2178309/150‑1 (MQ=255)
                       tGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTATGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTCAGAGTGGCGTGGTGTACGCggt                                                                                                                                >  2:3889043/1‑150 (MQ=255)
                        gCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCtgtg                                                                                                                               <  2:1323525/150‑1 (MQ=255)
                        gCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCtgtg                                                                                                                               <  2:1019025/150‑1 (MQ=255)
                         cAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGa                                                                                                                              <  1:3540469/150‑1 (MQ=255)
                         cAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGa                                                                                                                              <  1:474474/150‑1 (MQ=255)
                         cAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATAAAGAGTGGCGTATTGTACGCTGTGa                                                                                                                              <  1:1897190/150‑1 (MQ=255)
                             gTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAAcgc                                                                                                                          >  1:5584308/1‑150 (MQ=255)
                               ttCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATAAAGAGTGGCGTATTGTACGCTGTGAACGCGt                                                                                                                        >  1:4485425/1‑150 (MQ=255)
                               ttCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATAAAGAGTGGCGTATTGTACGCTGTGAACGCGt                                                                                                                        >  1:1104221/1‑150 (MQ=255)
                                 cGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATACACCGCCACCTGTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTg                                                                                                                      >  2:4945227/1‑150 (MQ=255)
                                 cGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTg                                                                                                                      <  1:1193243/150‑1 (MQ=255)
                                  ggtggtAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTgg                                                                                                                     <  1:2508837/150‑1 (MQ=255)
                                  ggtggtAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTgg                                                                                                                     >  2:1039086/1‑150 (MQ=255)
                                  ggtggtAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTgg                                                                                                                     <  2:3762718/150‑1 (MQ=255)
                                   gtggtAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTggg                                                                                                                    <  1:5553306/150‑1 (MQ=255)
                                       tAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCt                                                                                                                <  1:4235292/150‑1 (MQ=255)
                                        aaaaCCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTa                                                                                                               >  1:2861657/1‑150 (MQ=255)
                                               gCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTgg                                                                                                        <  1:3799892/150‑1 (MQ=255)
                                               gCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTgg                                                                                                        >  1:3351753/1‑150 (MQ=255)
                                               gCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTgg                                                                                                        >  1:1987340/1‑150 (MQ=255)
                                               gCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTgg                                                                                                        >  2:5298387/1‑150 (MQ=255)
                                                ccTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGa                                                                                                       <  2:55682/150‑1 (MQ=255)
                                                 ctctTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGaa                                                                                                      <  2:3659870/150‑1 (MQ=255)
                                                 ctctTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGaa                                                                                                      >  1:625478/1‑150 (MQ=255)
                                                 ctctTCCAGCTTTTCAGCCAGGTGTTCTGCTAAATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGaa                                                                                                      >  2:2598874/1‑150 (MQ=255)
                                                  tctTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGaaa                                                                                                     >  2:289451/1‑150 (MQ=255)
                                                    ttCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAg                                                                                                   >  2:892509/1‑150 (MQ=255)
                                                    ttCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAg                                                                                                   <  1:345776/150‑1 (MQ=255)
                                                    ttCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAg                                                                                                   <  1:5410529/150‑1 (MQ=255)
                                                      ccAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTa                                                                                                 <  2:2313721/150‑1 (MQ=255)
                                                       cAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTAt                                                                                                <  1:3125432/150‑1 (MQ=255)
                                                            tttCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGAt                                                                                           <  1:3004622/150‑1 (MQ=255)
                                                            tttCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGAt                                                                                           <  1:1401223/150‑1 (MQ=255)
                                                                aGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTaaa                                                                                       >  2:1089791/1‑150 (MQ=255)
                                                                    aGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATAAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAg                                                                                   <  2:4485425/150‑1 (MQ=255)
                                                                     ggTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGc                                                                                  <  1:5437626/150‑1 (MQ=255)
                                                                      gtgtTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATGTCTGCCATAAACCGCCACCTTTATAAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGcc                                                                                 <  1:2187984/150‑1 (MQ=255)
                                                                       tgtTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCg                                                                                <  1:4343202/150‑1 (MQ=255)
                                                                       tgtTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCg                                                                                <  2:2642878/150‑1 (MQ=255)
                                                                        gtTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGa                                                                               <  2:2007432/150‑1 (MQ=255)
                                                                        gtTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATATACCTGTGGAAAAGTATGGGATTAAAAAAGCCGa                                                                               <  1:2752738/150‑1 (MQ=255)
                                                                         ttCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGAt                                                                              <  1:3738811/150‑1 (MQ=255)
                                                                         ttCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGAt                                                                              <  2:3328428/150‑1 (MQ=255)
                                                                         ttCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGAt                                                                              <  1:893618/150‑1 (MQ=255)
                                                                          tCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATc                                                                             <  2:4260467/150‑1 (MQ=255)
                                                                           cTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCa                                                                            <  2:220719/150‑1 (MQ=255)
                                                                           cTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCa                                                                            >  1:3950468/1‑150 (MQ=255)
                                                                            tGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAg                                                                           <  2:4017848/150‑1 (MQ=255)
                                                                                aCATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCt                                                                       >  1:152810/1‑150 (MQ=255)
                                                                                aCATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCt                                                                       >  1:3829334/1‑150 (MQ=255)
                                                                                   tatTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATGAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGa                                                                    <  2:5433183/150‑1 (MQ=255)
                                                                                    atTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGAt                                                                   <  2:4418382/150‑1 (MQ=255)
                                                                                     ttCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATg                                                                  <  1:659613/150‑1 (MQ=255)
                                                                                         gCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTAc                                                              <  2:689180/150‑1 (MQ=255)
                                                                                           aCCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGc                                                            >  2:631097/1‑150 (MQ=255)
                                                                                           aCCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGc                                                            >  1:2341124/1‑150 (MQ=255)
                                                                                             cgccgAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCAt                                                          <  1:1276732/150‑1 (MQ=255)
                                                                                                   gggTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCgg                                                    <  2:2137348/150‑1 (MQ=255)
                                                                                                       gctgcCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGttt                                                <  2:4568003/150‑1 (MQ=255)
                                                                                                         tgcCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTg                                              <  1:1596046/150‑1 (MQ=255)
                                                                                                         tgcCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTg                                              >  1:5600835/1‑150 (MQ=255)
                                                                                                         tgcCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATAAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTg                                              <  2:439089/150‑1 (MQ=255)
                                                                                                             gCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAgg                                          <  2:3534984/150‑1 (MQ=255)
                                                                                                                  tAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGAt                                     >  2:573328/1‑150 (MQ=255)
                                                                                                                   aaGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGAGGGTACGCATGATCGGGTTTTGCAGGACGATc                                    >  2:2792133/1‑150 (MQ=255)
                                                                                                                    agagTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCa                                   <  2:5657288/150‑1 (MQ=255)
                                                                                                                      agTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAAt                                 <  2:5482039/150‑1 (MQ=255)
                                                                                                                        tGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGt                               <  1:794957/150‑1 (MQ=255)
                                                                                                                            atCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCg                           >  1:5635228/1‑150 (MQ=255)
                                                                                                                            atCTGCCATAAACCGCCACCTTTATAAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCg                           >  1:1337363/1‑150 (MQ=255)
                                                                                                                             tCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCgg                          <  2:415548/150‑1 (MQ=255)
                                                                                                                                     aaaCCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCGGTGGACTGa                  >  2:4770837/1‑150 (MQ=255)
                                                                                                                                     aaaCCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCGGTGGACTGa                  >  2:1693091/1‑150 (MQ=255)
                                                                                                                                       aCCGCCACCTTTATAAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCGGTGGACTGAAt                <  2:3627086/150‑1 (MQ=255)
                                                                                                                                         cGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCGGTGGACTGAAttt              <  1:5101827/150‑1 (MQ=255)
                                                                                                                                          gCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCGGTGGACTGAATTtc             >  1:5048709/1‑150 (MQ=255)
                                                                                                                                            cACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCGGTGGACTGAATTtcat           <  1:2421234/150‑1 (MQ=255)
                                                                                                                                              ccTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAATAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCGGTGGACTGAACTtcatca         <  1:2598874/150‑1 (MQ=255)
                                                                                                                                              ccTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCGGTGGACTGAATTtcatca         <  2:3829334/150‑1 (MQ=255)
                                                                                                                                                tttATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCGGTGGACTGAATTTCATCAAt       <  1:2053486/150‑1 (MQ=255)
                                                                                                                                                tttATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCGGTGGACTGAATTTCATCAAt       <  1:1038280/150‑1 (MQ=255)
                                                                                                                                                  tattaAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCGGTGGACTGAATTTCATCAATTg     <  2:1225710/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAACCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGTTGGGATCTACCTGTGGAAAAGTATGGGATTAAAAAAGCCGATCAGGGCTTGATGGTACGCATGATCGGGTTTTGCAGGACGATCAATGTCTCGGTGGACTGAATTTCATCAATTGTTT  >  CP009273/3919683‑3919981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: