| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,049,008 | A→T | 13.6% | L231Q (CTG→CAG) | glnL ← | sensory histidine kinase in two‑component regulatory system with GlnG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,049,008 | 0 | A | T | 13.6% | 907.6 / 112.3 | 295 | L231Q (CTG→CAG) | glnL | sensory histidine kinase in two‑component regulatory system with GlnG |
| Reads supporting (aligned to +/- strand): ref base A (123/132); new base T (10/30); total (133/162) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.22e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01 | |||||||||||
Only 100 of 301 total aligned reads displayed.
CCGCCAGCCGGTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGCGGCCCCAACAGACGGTCGACC > CP009273/4048859‑4049157 | ccgccAGCCGGTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCa > 1:1337142/1‑150 (MQ=255)ccgccAGCCGGTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCATTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCa < 2:1862388/150‑1 (MQ=255) cgccAGCCGGTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAg > 1:5044011/1‑150 (MQ=255) cgccAGCCGGTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTACACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCACTTTGATCCGGGTCGTGCGCCAg > 2:3781558/1‑150 (MQ=255) gccAGCCGGTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATATAACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGt > 2:2371309/1‑150 (MQ=255) ccAGCCGGTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCTGtt < 1:4379939/150‑1 (MQ=255) cAGCCGGTCGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTc < 2:3356729/150‑1 (MQ=255) cAGCCGGTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTc < 1:5217675/150‑1 (MQ=255) gCCGGTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCg > 1:2361658/1‑150 (MQ=255) ccGGTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCgg < 2:1117849/150‑1 (MQ=255) ccGGTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCgg < 1:1460403/150‑1 (MQ=255) cGGTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGt < 1:3468660/150‑1 (MQ=255) cGGTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGt > 1:3102130/1‑150 (MQ=255) ggTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTa < 1:2034113/150‑1 (MQ=255) ggTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTa < 1:4862138/150‑1 (MQ=255) aGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGc > 2:594798/1‑150 (MQ=255) gcgcTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCt < 2:4931323/150‑1 (MQ=255) cgcTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTg > 1:3767346/1‑150 (MQ=255) gcTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACACTATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTgg > 2:4795308/1‑150 (MQ=255) tCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCTGTTCCGGTAGGCTGGGa < 1:5156724/150‑1 (MQ=255) tCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGa < 1:4829049/150‑1 (MQ=255) tCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGa > 2:5388786/1‑150 (MQ=255) ccGTGTAGGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCg < 2:1376410/150‑1 (MQ=255) ccGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCg < 2:726139/150‑1 (MQ=255) cGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGt > 1:670979/1‑150 (MQ=255) gtgtAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTa > 1:2573048/1‑150 (MQ=255) gtAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAAt > 1:2439309/1‑150 (MQ=255) tAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCTGTTCCGGTAGGCTGGGATCGTAATc < 2:1782186/150‑1 (MQ=255) aaGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCa < 2:3193382/150‑1 (MQ=255) ggTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCGGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACg > 2:2930356/1‑150 (MQ=255) cAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAAt > 1:790731/1‑150 (MQ=255) tGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAAc > 2:3689693/1‑150 (MQ=255) aCGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCTGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCa > 1:2609957/1‑150 (MQ=255) gcgGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTGCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACg > 2:1603074/1‑150 (MQ=255) ggTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCTGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGtt < 1:5438112/150‑1 (MQ=255) ggTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGtt < 1:322883/150‑1 (MQ=255) gTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTg > 2:1984768/1‑150 (MQ=255) gTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTg > 1:1002058/1‑150 (MQ=255) tGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGGAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGt < 2:4566467/150‑1 (MQ=255) cGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTcc < 1:4782201/150‑1 (MQ=255) cAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTc < 1:942105/150‑1 (MQ=255) aGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCGGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTcc > 2:4448082/1‑150 (MQ=255) aaTGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCAt < 1:2908734/150‑1 (MQ=255) tGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCg < 1:2560295/150‑1 (MQ=255) tGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCg > 2:4118866/1‑150 (MQ=255) tGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCg < 1:4564405/150‑1 (MQ=255) aTTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGac < 2:4499958/150‑1 (MQ=255) cACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCTGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCa > 2:4242133/1‑150 (MQ=255) ccGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGc < 1:3592251/150‑1 (MQ=255) cGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCg < 1:2080214/150‑1 (MQ=255) tCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCTGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTAcc < 2:1042207/150‑1 (MQ=255) gCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCTGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGGTCCATCGACACCAGCGTTACCAcgc < 2:5344580/150‑1 (MQ=255) cccAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGt > 2:3549272/1‑150 (MQ=255) cccAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGt > 2:2313697/1‑150 (MQ=255) ccAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGtt < 1:5245513/150‑1 (MQ=255) ccAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACATGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCTGTAGGCTGGGATCGTAATCACGAATCAACCTCACGGTGTCCGGCAGTTCCTTCGACAACAGCGTTTCCACGGGtt < 2:4051909/150‑1 (MQ=255) aGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCa < 2:1472101/150‑1 (MQ=255) aGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCa < 1:3650316/150‑1 (MQ=255) cTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTAAGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTACATCGACAACATCGTTACCACGCGTTCAGCCAc > 2:1825421/1‑150 (MQ=255) tGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACt > 2:823930/1‑150 (MQ=255) tAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCTGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACttt < 1:1507651/150‑1 (MQ=255) gcgcATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGGATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTtgt < 1:2535220/150‑1 (MQ=255) cATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGaa < 2:2636228/150‑1 (MQ=255) aTTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAAt > 1:4534080/1‑150 (MQ=255) aTTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAAt > 2:2415734/1‑150 (MQ=255) aTTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAAt > 2:4925062/1‑150 (MQ=255) ttGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCTGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATa < 2:4724528/150‑1 (MQ=255) ttGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATa < 2:4832980/150‑1 (MQ=255) cgcACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACtt < 1:1283912/150‑1 (MQ=255) gcACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACttt > 2:1925006/1‑150 (MQ=255) caATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCTGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCgg < 1:4000098/150‑1 (MQ=255) aaTATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGt < 2:1292578/150‑1 (MQ=255) aaTATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGt < 2:2506030/150‑1 (MQ=255) aaTATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGt > 1:5550365/1‑150 (MQ=255) gtatTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGGAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTa > 2:1330324/2‑150 (MQ=255) atatTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTa > 2:2731369/1‑150 (MQ=255) ttCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAAcg < 2:5359056/150‑1 (MQ=255) tCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTGGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAAcgc < 1:916729/150‑1 (MQ=255) cAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACGTTGTGAATACTGTCGGTAAcgcg > 2:2911645/1‑150 (MQ=255) cAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGGAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAAcgcg < 2:5180839/150‑1 (MQ=255) gCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCTGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAAcgcgcg < 2:5310412/150‑1 (MQ=255) aaGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTa > 2:2176207/1‑150 (MQ=255) ttCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAg > 2:4681988/1‑150 (MQ=255) cAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCt < 1:1827397/150‑1 (MQ=255) aaTTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTg > 1:1157933/1‑150 (MQ=255) aTTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTACTCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGc < 2:3039444/150‑1 (MQ=255) aTTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGc > 1:1080154/1‑150 (MQ=255) aTTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGc > 2:616678/1‑150 (MQ=255) aTTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGc < 2:1079563/150‑1 (MQ=255) tttGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGCg > 1:3053598/1‑150 (MQ=255) tGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGCGGc > 1:1691466/1‑150 (MQ=255) gATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGCGGcc > 1:4941868/1‑150 (MQ=255) tCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGCGGcccc > 2:2133840/1‑150 (MQ=255) cGGGTCGTGCGCCTGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGCGGCCCCaa > 1:1734787/1‑150 (MQ=255) ggTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGCGGCCCCAACa < 2:3102130/150‑1 (MQ=255) gTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGCGGCCCCAACAg > 1:330886/1‑150 (MQ=255) cGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGCGGCCCCAACAGAc < 1:4338760/150‑1 (MQ=255) gTGCGCCAGGTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGCGGCCCCAACAGACg < 2:5553016/150‑1 (MQ=255) tGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGCGGCCCCAACAGACgg > 2:2456810/1‑150 (MQ=255) gcgcCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGCGGCCCCAACAGACGGt > 1:4137738/1‑150 (MQ=255) | CCGCCAGCCGGTAGCGCTCGCCGTGTAAGGTCAGTTGAAACGCGGTGCGGGTACGCAGAATGATTTCACCGCCTTCCGGCCCCAGCGCCTGTAGCGCATTGCGCACAATATTCAGCAAGACCTGTTCAATTTGATCCGGGTCGTGCGCCAGTTCCGGTAGGCTGGGATCGTAATCACGAATCAACCGCACGTTGTCCGGCAGTTCCATCGACACCAGCGTTACCACGCGTTCAGCCACTTTGTGAATACTTTCGGTAACGCGCGTACCGGGCAGCTGCGGCCCCAACAGACGGTCGACC > CP009273/4048859‑4049157 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |