| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,306,969 | T→A | 38.1% | N23Y (AAC→TAC) | phnM ← | ribophosphonate triphosphate hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,306,969 | 0 | T | A | 38.1% | 308.8 / inf | 325 | N23Y (AAC→TAC) | phnM | ribophosphonate triphosphate hydrolase |
| Reads supporting (aligned to +/- strand): ref base T (103/98); new base A (64/60); total (167/158) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.01e-01 | |||||||||||
Only 100 of 328 total aligned reads displayed.
AGGCCAGTCAACTTTCGGGCGCGGGGTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCC > CP009273/4306820‑4307118 | ggCCAGTCAACTTTCGGGCGCGGGGTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTc > 1:5655570/1‑150 (MQ=255) aGTCAACTTTCGGGCGCGGGGTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCa > 1:351843/1‑150 (MQ=255) aCTTTCGGGCGCGGGGTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTcc < 1:3399710/150‑1 (MQ=255) aCTTTCGGGCGCGGGGTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTcc > 1:1381516/1‑150 (MQ=255) cTTTCGGGCGCGGGGTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCa > 2:3121165/1‑150 (MQ=255) gggCGCGGGGTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGaa > 1:5505371/1‑150 (MQ=255) gggCGCGGGGTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGaa > 1:318866/1‑150 (MQ=255) ggCGCGGGGTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAAc > 1:2406590/1‑150 (MQ=255) ggCGCGGGGTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAAc > 1:1049658/1‑150 (MQ=255) ggCGCGGGGTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGAGTTCGCCGTTCTGCACCTCCAGCGAAc > 2:3191411/1‑150 (MQ=255) gcgcGGGGTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAAcc < 1:5669618/150‑1 (MQ=255) cgcgGGGTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCg > 1:2636850/1‑150 (MQ=255) ggggTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCtt > 1:5088451/1‑150 (MQ=255) ggggTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCtt < 2:1059800/150‑1 (MQ=255) gggTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTa > 1:769801/1‑150 (MQ=255) gggTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTa < 2:2698904/150‑1 (MQ=255) ggTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTac > 2:1147559/1‑150 (MQ=255) gTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTacc > 1:202283/1‑150 (MQ=255) gTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTacc > 1:202433/1‑150 (MQ=255) gaagaaTTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTaccac < 2:4204041/150‑1 (MQ=255) gaagaaTTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTaccac > 1:4938247/1‑150 (MQ=255) agaaTTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCt < 1:2139538/150‑1 (MQ=255) agaaTTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCt > 1:1045213/1‑150 (MQ=255) gaaTTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTc < 2:4105996/150‑1 (MQ=255) gaaTTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTc > 1:5249046/1‑150 (MQ=255) aTTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGt > 1:4236321/1‑150 (MQ=255) tttATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGtt > 1:2726544/1‑150 (MQ=255) aTCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTc < 1:5059949/150‑1 (MQ=255) aTCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTc < 1:3741926/150‑1 (MQ=255) aTCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTc > 1:1802552/1‑150 (MQ=255) aTCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTc > 1:3146053/1‑150 (MQ=255) aTCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTc < 2:2981540/150‑1 (MQ=255) aTCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTCTTc > 2:5192211/1‑150 (MQ=255) ggTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCtt < 2:2757705/150‑1 (MQ=255) gTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTa > 2:1288045/1‑150 (MQ=255) gTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTa < 1:1445840/150‑1 (MQ=255) aTGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAAc < 1:882810/150‑1 (MQ=255) ttcAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCTGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTGGCCGTTCTGCTACTCCAGCGTACCGCTTACCACCTCGTTTTCCTGCTCCAGCGTACCg < 2:699181/148‑1 (MQ=255) aGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTa > 1:3524441/1‑150 (MQ=255) aGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTa < 2:3451454/150‑1 (MQ=255) cTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTAtt > 2:3800405/1‑150 (MQ=255) aTCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATa > 2:1351757/1‑150 (MQ=255) aTCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATa > 1:5577559/1‑150 (MQ=255) tCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATaa > 1:973113/1‑150 (MQ=255) aGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATc > 2:1222450/1‑150 (MQ=255) aGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATc > 2:4062527/1‑150 (MQ=255) gCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCa < 1:1680994/150‑1 (MQ=255) gCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCa > 2:1631143/1‑150 (MQ=255) ccccGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCAt < 2:5517286/150‑1 (MQ=255) ccccGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCAt > 1:134601/1‑150 (MQ=255) ccccGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCAt < 1:4096253/150‑1 (MQ=255) cccGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATg < 2:566315/150‑1 (MQ=255) cGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGaa < 1:2796194/150‑1 (MQ=255) ggCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAag > 2:2554118/1‑150 (MQ=255) agcagcCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAgg > 1:2283838/1‑150 (MQ=255) agcagcCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAgg < 2:663017/150‑1 (MQ=255) agccagccGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTc > 1:5174274/1‑150 (MQ=255) agccagccGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTc < 2:128072/150‑1 (MQ=255) agccagccGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTc < 2:754527/150‑1 (MQ=255) ccagccGCCGTCGCCGTCCCTCGCCCCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGACTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTGCTCCCGCACCAGCTTAACGTAATTGATAATCATGAAGAGGCTccc < 2:4252660/150‑1 (MQ=255) cagccGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCa < 1:1589360/150‑1 (MQ=255) cagccGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCa < 1:2488267/150‑1 (MQ=255) agccGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCAt < 2:1459465/150‑1 (MQ=255) gccgccTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCAtt > 2:4676500/1‑150 (MQ=255) ccgccTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTg < 1:3283515/150‑1 (MQ=255) ccgccTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAAACGCTTACCACCTCGTTTTCCAGCACCAGCTAAACGTTATTGATAATCATGACGAGGCTCCCATTg > 2:3248670/1‑150 (MQ=255) cgccTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTgg < 2:4149716/150‑1 (MQ=255) cTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTCACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTg > 2:1666320/1‑150 (MQ=255) ttCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGc > 2:4520766/1‑150 (MQ=255) ttCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGc < 2:3091997/150‑1 (MQ=255) tCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCa > 1:2986311/1‑150 (MQ=255) cGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTCACGTTATTGATAATCATGAAGAGGCTCCCCTTGGGTGCAg < 2:1803885/150‑1 (MQ=255) gCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAgg < 1:2809892/150‑1 (MQ=255) ccGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGTGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTGAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGc > 2:5592335/1‑150 (MQ=255) ccGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGc < 1:44869/150‑1 (MQ=255) gTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCgg > 1:5540142/1‑150 (MQ=255) tCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGc < 2:2403267/150‑1 (MQ=255) ccTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGAc > 2:3962800/1‑150 (MQ=255) tCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGt > 1:1266791/1‑150 (MQ=255) cAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTa < 1:1160638/150‑1 (MQ=255) cAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTa < 2:2316534/150‑1 (MQ=255) aGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTAc < 2:4791149/150‑1 (MQ=255) aGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTAc > 1:1395284/1‑150 (MQ=255) aGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTAc < 2:3308508/150‑1 (MQ=255) cggcTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTa > 2:5447191/1‑150 (MQ=255) ggcTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTAc > 1:3902519/1‑150 (MQ=255) gcTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACa > 1:4895350/1‑150 (MQ=255) ggCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTc < 1:2605032/150‑1 (MQ=255) ggCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTc < 2:5016129/150‑1 (MQ=255) gCTTTCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCg < 2:3519126/150‑1 (MQ=255) cTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACCGCTTCGt > 2:4320859/1‑150 (MQ=255) ttCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCa > 1:5141597/1‑150 (MQ=255) tCGGCAAAGGCGCGGATTTCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCAt < 1:4594740/150‑1 (MQ=255) ggCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCATgg > 1:4694510/1‑150 (MQ=255) cgcgGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCATGGAAGATGcc > 2:3700654/1‑150 (MQ=255) gcgGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCATGGAAGATGCCt < 2:2177464/150‑1 (MQ=255) tttCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCATGGAAGATGCCTACGAt > 2:2035184/1‑150 (MQ=255) tCGCCGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCATGGAAGATGCCTACGATgg > 2:907406/1‑150 (MQ=255) ccGTACTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGTGACGTCATTACGTACAGCTTCGTCATGGAAGATGCCTACGATGGCTg < 2:4903013/150‑1 (MQ=255) gTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCATGGAAGATGCCTACGATGGCTgcg > 2:951925/1‑150 (MQ=255) | AGGCCAGTCAACTTTCGGGCGCGGGGTGAAGAATTTATCCAGATTATCGGTATGCAGCTCAATCAGCCCCGGCAGCAGCCAGCCGCCTTCGCCGTCCATCGCCTCCGGCAGGCGGCTCTGGCTTTCGGCAAAGGCGCGGATTTCGCCGTTCTGCACCTCCAGCGAACCGCTTACCACCTCGTTTTCCAGCACCAGCTTAACGTTATTGATAATCATGAAGAGGCTCCCATTGGGTGCAGGCGGTCGGCGACGTCATTACGTACAGCTTCGTCATGGAAGATGCCTACGATGGCTGCGCC > CP009273/4306820‑4307118 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |