| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,502,777 | G→A | 5.1% | N150N (AAC→AAT) | fecC ← | iron‑dicitrate transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,502,777 | 0 | G | A | 5.1% | 1362.3 / 37.1 | 373 | N150N (AAC→AAT) | fecC | iron‑dicitrate transporter subunit |
| Reads supporting (aligned to +/- strand): ref base G (190/164); new base A (11/8); total (201/172) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 395 total aligned reads displayed.
AGCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAGCGCGCTGGTAAGCGCCATAGCCAGCGCCGC > CP009273/4502628‑4502926 | agCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAgtttg > 2:524306/1‑150 (MQ=255) gCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAgtttgt < 2:5570625/150‑1 (MQ=255) gCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAgtttgt < 2:1417316/150‑1 (MQ=255) gCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTc < 1:4019142/150‑1 (MQ=255) ccAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCt < 1:4934084/150‑1 (MQ=255) cAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTg > 2:2730247/1‑150 (MQ=255) gACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTc > 2:4237238/1‑150 (MQ=255) cATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCCGCCAGTAACAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCAt < 2:197945/150‑1 (MQ=255) cATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCAt > 2:2045795/1‑150 (MQ=255) cATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCAt < 1:3021237/150‑1 (MQ=255) aTCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATg < 1:5119070/150‑1 (MQ=255) tGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTa < 2:2410432/150‑1 (MQ=255) ccAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATg < 2:4744405/150‑1 (MQ=255) gCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACg < 1:2936707/150‑1 (MQ=255) cGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTGTGTTTCTGTCATGGGTATGACGa > 2:3515671/1‑150 (MQ=255) gggCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGaa < 2:972265/150‑1 (MQ=255) gggCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTATTTCTGTCATGGGTATGACGaa > 1:1047042/1‑150 (MQ=255) gCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAAt < 1:778325/150‑1 (MQ=255) gggACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGTATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGc > 1:3215505/1‑150 (MQ=255) gggACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTATTTCTGTCATGGGTATGACGAAATCCGc > 1:2243503/1‑150 (MQ=255) ggACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGcc < 2:409605/150‑1 (MQ=255) gACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGcct < 2:217586/150‑1 (MQ=255) acacTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGcctc > 2:1942701/1‑150 (MQ=255) cacTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTATGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGcctcc < 2:3467183/150‑1 (MQ=255) cTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTg > 1:4766167/1‑150 (MQ=255) tCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGc < 1:1049106/150‑1 (MQ=255) gCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTATTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGt < 1:2338475/150‑1 (MQ=255) ccagccagTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGa > 1:5578205/1‑150 (MQ=255) agccagTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGAcc > 1:2536030/1‑150 (MQ=255) agccagTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATACGCCTCCTGCGGTCATGAcc > 2:1159938/1‑150 (MQ=255) ccagTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACcag > 2:1335370/1‑150 (MQ=255) ccagTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACcag > 1:1240977/1‑150 (MQ=255) cagTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACcagc > 1:3360836/1‑150 (MQ=255) agTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTCTGACGAAATCCGCCTCCTGCGGTCATGACcagca > 2:2962806/1‑150 (MQ=255) tAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCagcagc > 2:4409053/1‑150 (MQ=255) aaaaGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGcagcc > 1:3076098/1‑150 (MQ=255) aaaaGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGcagcc > 2:2493711/1‑150 (MQ=255) aGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGcagccagc > 2:3190420/1‑150 (MQ=255) aTGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTc > 1:626941/1‑150 (MQ=255) aTGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTc < 2:5494197/150‑1 (MQ=255) gTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCAcgcc > 1:1909895/1‑150 (MQ=255) tAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCAcgccg > 2:4468360/1‑150 (MQ=255) cATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGcccc > 1:3303214/1‑150 (MQ=255) aTGTTCTTCGGCCAGCAGCAGGGTGATGAGGGTAAGGCCCATACAAAAGGCCGACAGCTCGATTCCCGCGAGGATCAGTTTGTTTGTGTCATGGGTATGTCGAAATCCGCCTCCTGCGGTCATGACCAGCAGACAGCTCACGCCGccccc < 2:2771510/150‑1 (MQ=255) gATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGc > 2:2372781/1‑150 (MQ=255) aTCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCa > 2:3398435/1‑150 (MQ=255) aTCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCa > 2:736631/1‑150 (MQ=255) tCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCAt < 1:1252752/150‑1 (MQ=255) cTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTATTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATg > 2:3169518/1‑150 (MQ=255) tCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGTAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCTCGCCGCCCCCGCATGcc < 1:1679750/150‑1 (MQ=255) tCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGcc < 1:1209264/150‑1 (MQ=255) cGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCcg < 2:1635943/150‑1 (MQ=255) ggCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCcgc > 1:4674091/1‑150 (MQ=255) ggCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCcgc > 2:1588640/1‑150 (MQ=255) ggCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCcgc > 1:138573/1‑150 (MQ=255) gCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCcgcg < 2:1017263/150‑1 (MQ=255) ccAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGa > 2:4937881/1‑150 (MQ=255) agcagcagGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGatg < 1:2714595/150‑1 (MQ=255) agcagcagGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTATTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGatg < 2:2680567/150‑1 (MQ=255) cagcagGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGatgaa < 1:4592443/150‑1 (MQ=255) agcagGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGatgaat < 1:4204310/150‑1 (MQ=255) gcagGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGatgaatg < 1:5665191/150‑1 (MQ=255) agGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGAc > 2:2558841/1‑150 (MQ=255) gggTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACa > 2:328880/1‑150 (MQ=255) gTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACagt < 2:5367098/150‑2 (MQ=255) gTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACaga > 1:4391420/1‑150 (MQ=255) aTGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAgagac > 2:600816/1‑149 (MQ=255) cGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAg < 1:98151/150‑1 (MQ=255) cGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAg < 1:1785469/150‑1 (MQ=255) ggTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGcc < 2:1124341/150‑1 (MQ=255) ggTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGcc > 2:5501165/1‑150 (MQ=255) tAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTg < 2:5105884/150‑1 (MQ=255) aaGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGc > 2:1000422/1‑150 (MQ=255) aGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCa < 2:3852483/150‑1 (MQ=255) gCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAAt > 2:2274668/1‑150 (MQ=255) ccctACCAAACGCCGACAGCGCGATACCCGCGAGGACCAGTTTGTTTCTGTCACGGGTATGACGAAATCCGCCTCCGGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCg < 2:4853782/147‑1 (MQ=255) aTACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGc > 1:1804558/1‑150 (MQ=255) aTACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGc < 1:366154/150‑1 (MQ=255) aCAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGt > 2:1529363/1‑150 (MQ=255) cAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTc < 1:4979025/150‑1 (MQ=255) aaaGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCAGGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCgg > 1:1967851/1‑150 (MQ=255) aaGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGa > 1:4268294/1‑150 (MQ=255) gACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAgc > 2:5077571/1‑150 (MQ=255) gACAGCGCGATACCCGCGAGGATCAGTTTATTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACCGAGAATAGCCTGCCATCGGCGTCGGACTCAgc > 2:3636074/1‑150 (MQ=255) cAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAgcgc > 1:372950/1‑150 (MQ=255) cAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAgcgc > 2:4498227/1‑150 (MQ=255) cgcgATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAGCGCGCt < 2:400419/150‑1 (MQ=255) ccGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAGCGCGCTGGTAAgcg < 1:3819196/150‑1 (MQ=255) cgcgAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAGCGCGCTGGTAAgcgc > 1:881817/1‑150 (MQ=255) gcgAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAGCGCGCTGGTAAGCGcc > 2:2115111/1‑150 (MQ=255) cgAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAGCGCGCTGGTAAGCGCCa < 1:5595153/150‑1 (MQ=255) cgAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGACTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGAAATCGGCGTCGGACTCAGCGCGCTGGTAAGCGCCa > 1:2968545/1‑150 (MQ=255) gAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAGCGCGCTGGTAAGCGCCAt > 2:3774823/1‑150 (MQ=255) aGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAGCGCGCTGGTAAGCGCCATa > 2:1053936/1‑150 (MQ=255) aGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAAACGGCGTCGGACTCAGCGCGCTGGTAAGCGCCATa > 2:3721665/1‑150 (MQ=255) aTCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAGCGCGCTGGTAAGCGCCATAGcc < 1:2634064/150‑1 (MQ=255) cAGTTTATTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAGCGCGCTGGTAAGCGCCATAGCCAg > 2:1764462/1‑150 (MQ=255) ttgtttCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAGCGCGCTGGTAAGCGCCATAGCCAgcgcc < 2:4528720/150‑1 (MQ=255) ttgtttCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAGCGCGCTGGTAAGCGCCATAGCCAgcgcc < 2:1249041/150‑1 (MQ=255) gtttCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAGCGCGCTGGTAAGCGCCATAGCCAgcgccgc < 1:3502605/150‑1 (MQ=255) | AGCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAAAAGGCCGACAGCGCGATACCCGCGAGGATCAGTTTGTTTCTGTCATGGGTATGACGAAATCCGCCTCCTGCGGTCATGACCAGCAGCCAGCTCACGCCGCCCCCGCATGCCGCGATGAATGACAGAGAATAGCCTGCAATCGGCGTCGGACTCAGCGCGCTGGTAAGCGCCATAGCCAGCGCCGC > CP009273/4502628‑4502926 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |