BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	360104 =	197 (0.740)	190 (0.710)	106/276	NT	49.1%	intergenic (‑38/+557)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor
*	?	CP009273	= 360286	NA (NA)	190 (0.710)	106/276	NT	49.1%	intergenic (‑220/+375)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor

Only 100 of 432 total aligned reads displayed.

CGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGA  >  CP009273/359956‑360251

cGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCa                                                                                                                                                     <  2:657321/149‑1 (MQ=255)

 ggTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCaa                                                                                                                                                    >  2:4340096/1‑149 (MQ=255)

    aGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTc                                                                                                                                                 >  1:4569188/1‑149 (MQ=255)

     gTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTcc                                                                                                                                                <  1:2841792/149‑1 (MQ=255)

      ttCAGGCAGTTCAATCAACTGTTGACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCt                                                                                                                                               <  2:831877/149‑1 (MQ=255)

      ccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCt                                                                                                                                               >  1:1411392‑M1/143‑149 (MQ=255)

         aGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGc                                                                                                                                            <  1:2359675/149‑1 (MQ=255)

           gCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAg                                                                                                                                          >  1:312567/1‑149 (MQ=255)

             gttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgctgcctggggaattAATTCCTGGCAGtt                                                                                                                                        <  1:3048738‑M1/14‑1 (MQ=255)

             aGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGtt                                                                                                                                        <  1:632975/149‑1 (MQ=255)

             aGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGtt                                                                                                                                        >  1:4341240/1‑149 (MQ=255)

              gTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGttt                                                                                                                                       >  2:4080400/1‑149 (MQ=255)

               tgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTa                                                                                                                                      >  1:4434809‑M1/134‑149 (MQ=255)

                  aatcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATgg                                                                                                                                   <  1:1079382/149‑1 (MQ=255)

                  aatcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATgg                                                                                                                                   <  2:2617785/149‑1 (MQ=255)

                         tGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGt                                                                                                                            <  2:911299/149‑1 (MQ=255)

                          gttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTc                                                                                                                           >  1:2641595‑M1/123‑149 (MQ=255)

                          gTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCCTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAAGTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTc                                                                                                                           <  1:1446332/149‑1 (MQ=255)

                           tttACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCCGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTcc                                                                                                                          >  2:4481721/1‑149 (MQ=255)

                           tttACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTcc                                                                                                                          >  2:1419457/1‑149 (MQ=255)

                             tACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTg                                                                                                                        >  1:923810/1‑149 (MQ=255)

                              aCCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGc                                                                                                                       <  1:2688955/149‑1 (MQ=255)

                                cTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGccc                                                                                                                     >  1:1913905/1‑149 (MQ=255)

                                 tccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCt                                                                                                                                               >  2:4134680‑M1/116‑122 (MQ=255)

                                 tccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCt                                                                                                                                               <  1:3961045‑M1/7‑1 (MQ=255)

                                           aCATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCCGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCg                                                                                                          <  2:4657090/149‑1 (MQ=255)

                                            cATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCgg                                                                                                         >  1:3586286/1‑149 (MQ=255)

                                             ggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCggg                                                                                                        <  2:282300‑M1/46‑1 (MQ=255)

                                               ccAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGcc                                                                                                      >  1:3402718/1‑149 (MQ=255)

                                                 ttgtcctactcaggagagcggtccccgacaaacacccgaaaacaccaacggcccagactttcgactgcgcctttcgttttatttgttgcctggggaattAATTCCGGGCATTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCcgg                                                                                                    >  2:2095957‑M1/100‑148 (MQ=255)

                                                 agagGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGt                                                                                                    >  1:3753235/1‑149 (MQ=255)

                                                  gagGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCCGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTGTATGGCGGGCGTCCTGCCCGCCCCCCTCCGGGCCGtg                                                                                                   >  2:4562528/1‑148 (MQ=255)

                                                   agGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTg                                                                                                  >  1:2563499/1‑149 (MQ=255)

                                                      ctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCtt                                                                                               <  1:744367‑M1/55‑1 (MQ=255)

                                                       aCTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGcgtg                                                                                              >  1:2154809/1‑146 (MQ=255)

                                                       aCTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTc                                                                                              >  1:4674800/1‑149 (MQ=255)

                                                           ccccGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTAGGGGGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa                                                                                          <  1:2218753/147‑1 (MQ=255)

                                                                      aGCGGCTTACCATCCAGCGCCACCATCCCGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTGGCGTCGCACCGTTCAAATcc                                                                               >  2:2403581/1‑149 (MQ=255)

                                                                        cccgaccaacacccgataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGc                                                                             >  2:3048738‑M1/77‑149 (MQ=255)

                                                                        cGGCTTACCATCCCGCGCCACCTTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGc                                                                             <  1:3486351/149‑1 (MQ=255)

                                                                        cGGCTTACCATCCAGCGCCACCATCCAGTGCTGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGc                                                                             <  2:3856500/149‑1 (MQ=255)

                                                                          gCTTACCATCCCGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTc                                                                           <  2:2901151/149‑1 (MQ=255)

                                                                          gCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTc                                                                           >  2:4434755/1‑149 (MQ=255)

                                                                             caaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgccgggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCcg                                                                        <  2:3005885‑M1/78‑1 (MQ=255)

                                                                               ccATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCACTGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCcggc                                                                      <  2:2667539/149‑1 (MQ=255)

                                                                                 aTCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCcggcgg                                                                    <  2:2186554/149‑1 (MQ=255)

                                                                                   ccAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAt                                                                  >  2:3412624/1‑149 (MQ=255)

                                                                                   acagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGGTCAAATACGCTcccggcggct                                                                  <  1:3679839‑M1/84‑3 (MQ=255)

                                                                                   acagataaaacgaaaggcccagtctttcgactgagcctttcgttctatttgatgcctggggaattAATTCCTGGCAGTTTATggcgggc                                                                                                                              >  2:4312391‑M1/66‑89 (MQ=255)

                                                                                    cagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctcgcgaaatAATTCCTGGCAGGTTAATGCGGGCGTCCAGCCCGCCACCCTCCGGGCCGTTGCTTCGCCACCTTACAATACcctcccggccgctt                                                                 <  1:248787‑M1/85‑6 (MQ=255)

                                                                                    cAGCGCCACCATCCAGGGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCGGGCTGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAtt                                                                 <  1:3370387/149‑1 (MQ=255)

                                                                                     agataaaacgaaaggcccagtctttcgactgagcctgtcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCGTCGCAACGTTCAAAACCGctcccggcggcttg                                                                <  2:3273899‑M1/86‑5 (MQ=255)

                                                                                      gcgcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCt                                                                                                             <  2:77381/103‑1 (MQ=255)

                                                                                          caccaTCCAGTGCAGGAGCTCCGTTGATAAGGTGTCAAACATGTGAATTCCGATCCCCAAGTCCTGGCAGTTTATGGCGGGCGTCCGGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAACTCCGCTCCCGGCGGATTTGTCCt                                                           <  2:2243349/149‑1 (MQ=21)

                                                                                          aaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCt                                                           <  2:2280374‑M1/91‑1 (MQ=255)

                                                                                           accaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTa                                                          <  2:3586717/149‑1 (MQ=255)

                                                                                            ccctCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATTAGAATACCGATCCCCAATCCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTAc                                                         <  1:579967/146‑1 (MQ=255)

                                                                                            ccaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGCTTTGTcggac                                                         >  1:2985535/1‑145 (MQ=255)

                                                                                            ccaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTAc                                                         <  1:326012/149‑1 (MQ=255)

                                                                                              gtaaggcccagtctttcgtctgagcctttctttttattttttgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTc                                                       >  2:2333403‑M1/55‑149 (MQ=255)

                                                                                               aaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGcc                                                                                                                  >  2:373123‑M1/54‑89 (MQ=255)

                                                                                                aaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAg                                                     <  2:1526748‑M1/97‑1 (MQ=255)

                                                                                                  ggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattTATTCCTGGCAGTTTATGGCGGGCGTCCGGCCCGCCACCCTCCGGGCCGTGGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATGTGGCCTTCTCaggc                                                   <  2:3363458‑M1/99‑2 (MQ=255)

                                                                                                   gcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGgag                                                  >  1:2314382‑M1/50‑149 (MQ=255)

                                                                                                     gCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGagag                                                <  2:1920218/149‑1 (MQ=255)

                                                                                                     gCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATGCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGagag                                                <  2:3934313/149‑1 (MQ=255)

                                                                                                     ccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGGAGTTTATGGCGGGCGTCCTGCCCGCCACCCACCGGGCCGTGGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCAACTCAGGagag                                                <  2:3307116‑M1/102‑1 (MQ=255)

                                                                                                     ccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTGGGTTCGCAACCTTCCAAACCGCTCCCCGCGGATTTGTGCTACTCAGGagag                                                <  2:1673161‑M1/102‑1 (MQ=255)

                                                                                                       agtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCGTCGCAACGTTCAAAACCGCACCCCGCGGATTTGTACTACTCAGGAGAGCg                                              <  1:4230194‑M1/104‑1 (MQ=255)

                                                                                                       agtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTGGCGTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCg                                              <  2:1808406‑M1/104‑1 (MQ=255)

                                                                                                        gtctttcgactgagcctttcgttttatttgatgcctggggaattAATACCTGGAACTTAATGGCGTGCGTCATGCCCGCCACCCTCCGGGCCGTTGGTTCGCAACGGTCAAATCCGCTACCGGCGCATTTGTCCTACTCAGGCGAGCGt                                             <  2:4008466‑M1/105‑1 (MQ=255)

                                                                                                             tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCAcc                                        <  2:2720598/149‑1 (MQ=255)

                                                                                                                  tgagcctttcgttttatttgatgcctggggaattAATTcc                                                                                                                                                >  2:2056376‑M1/35‑40 (MQ=255)

                                                                                                                    agcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGacaaac                                 <  2:3513222‑M1/117‑1 (MQ=255)

                                                                                                                          tGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTAAAAACAGCTCCCGGCGGATTTGTCCTACACAGGAGAGCGTTAACCGAAAAacaacaca                           >  1:4137603/1‑147 (MQ=17)

                                                                                                                           gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGAt                          >  2:246549/1‑149 (MQ=255)

                                                                                                                             cAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCGTGGCAACCTTAAAATACGCACCCGGCGGATTTTTACGACTCAGGAGAGCGTTCACCGACAAACAAAAGATaa                        >  1:2429755/1‑149 (MQ=17)

                                                                                                                             cAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTGGGTTGGCAACCTTAAAATCCCGGCCCCGCGGCTTTGTGCAAAGCAGGTGGGCGGTGACCCACAAacaacaccaaa                        >  1:2088973/1‑144 (MQ=12)

                                                                                                                                tatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAAc                     <  2:606257‑M1/129‑1 (MQ=255)

                                                                                                                                aCATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAAc                     <  1:4261340/149‑1 (MQ=255)

                                                                                                                                   ttgatgcgtgggtaattAATTCCTGTAAGTTTAGGGCGGGCGGCCGGCCCGCCACCCTCCGGGCCGGTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGaa                  >  1:3323407‑M1/18‑149 (MQ=255)

                                                                                                                                    gcatgcctggggaaagAATTCCGGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAAcgaca                 >  2:3148482‑M1/17‑147 (MQ=255)

                                                                                                                                     agaATTCCGATCCCCATTTCCTGGCAGTTTTTGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAg                <  1:3839661/149‑1 (MQ=255)

                                                                                                                                      gaATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTGGGTTGGCCACCTTCAAAAACGCGCCCGGCGGCTTTGTGCTACTCAGGAGAGCGGTGACCCACCAACAAAACATAAAACAAAAgg               >  1:132176/1‑149 (MQ=14)

                                                                                                                                        tttCCGAGACCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGcc             <  2:132176/148‑1 (MQ=255)

                                                                                                                                        aTTCCGATCCCCATTTCCTGGCTGTTTAGGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACTTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGcc             <  1:2447199/149‑1 (MQ=255)

                                                                                                                                         ttCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGccc            <  2:3673851/149‑1 (MQ=255)

                                                                                                                                         cctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGccc            >  2:2379097‑M1/12‑149 (MQ=255)

                                                                                                                                            ggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGacaaac                                 <  2:3875270‑M1/117‑1 (MQ=255)

                                                                                                                                            ggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGacaaac                                 >  1:3875270‑M1/9‑125 (MQ=255)

                                                                                                                                             gATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTGGCGTCGCAACGTTCAAATACGCGCCCGGCGGATTTTTCCTACTCAGGAGAGCGTTCACCCACCAACAACAGAAAAAAAGAAAGGCCCAGTc        >  2:426060/1‑149 (MQ=11)

                                                                                                                                              aTCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCt       >  2:3383619/1‑149 (MQ=38)

                                                                                                                                               tCCCCAAGTCCTGGCAGTTTTTGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCtt      <  1:1732547/149‑1 (MQ=21)

                                                                                                                                                ccccAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCttt     <  2:169303/149‑1 (MQ=35)

                                                                                                                                                ccccAAGTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCttt     <  2:2559165/149‑1 (MQ=18)

                                                                                                                                                cataaaTTCCTGGCTGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCttt     <  2:1754979/145‑1 (MQ=17)

                                                                                                                                                aattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCGTCGCAACGGTCAAAACACCACCCCGCGGATTTGTCCTACGCCGGTGAGCGTTCACCGACCAACAACAGATAAAACGAACGGCCCAGTCttt     <  1:1168306‑M1/145‑1 (MQ=255)

                                                                                                                                                 cccAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTc    <  1:1843847/149‑1 (MQ=35)

                                                                                                                                                   tAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGa  >  1:1033106‑M1/2‑149 (MQ=255)

                                                                                                                                                   aaaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAACTCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGa  <  2:1152520/148‑1 (MQ=17)

CGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGA  >  CP009273/359956‑360251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.