| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,118,506 | A→T | 8.7% | L75Q (CTA→CAA) | yceB ← | lipoprotein, DUF1439 family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,118,506 | 0 | A | T | 8.7% | 659.1 / 7.8 | 224 | L75Q (CTA→CAA) | yceB | lipoprotein, DUF1439 family |
| Reads supporting (aligned to +/- strand): ref base A (104/94); new base T (2/23); total (106/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.14e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 228 total aligned reads displayed.
TTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGGT > CP009273/1118358‑1118654 | ttGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGACTACCGAACAGGGAGTTCATTTCCAGATTGGCGTCTCCGGGTa > 1:3240207/1‑149 (MQ=255) aCCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGt < 2:4527206/149‑1 (MQ=255) aCCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTGTATCAAACACGGGCAGCGCTGTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGt < 2:2734632/149‑1 (MQ=255) cGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTaa < 2:864018/149‑1 (MQ=255) cGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCt < 1:3155632/149‑1 (MQ=255) cGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCt < 1:2007137/149‑1 (MQ=255) cATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTa < 1:2793260/149‑1 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACCGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCGTAt > 1:638524/1‑149 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTTGCGTCTCCGGTTAGGGTAACCTTAt > 1:3832020/1‑149 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAt < 1:3130756/149‑1 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAt < 1:1980157/149‑1 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGAACAGGGAGTTCATGTCCAGGTTGGCGTCTCCGGTTAGGGTAACCTTAt > 2:3149157/1‑149 (MQ=255) tCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAtt < 1:4216067/149‑1 (MQ=255) tCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAtt < 2:4164853/149‑1 (MQ=255) cGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTc < 2:4380458/149‑1 (MQ=255) gACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCg > 1:1125749/1‑149 (MQ=255) aCTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGctc < 1:2196058/149‑1 (MQ=255) aCTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGctc < 1:628311/149‑1 (MQ=255) cTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGctct < 2:367427/149‑1 (MQ=255) ccATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGTCTACCGAAAAGGGAGTTAATTTCCAGATTGGCGTCTCCGGTTTGGGTAACCATATTCGGCTCTTcg > 1:434152/1‑149 (MQ=255) cATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGACCAGGGAGTTCATGTGCAGATTGGCGTCTCCGGGTTGGGTAACCGTATTCGGCTCTTcgc > 1:3982912/1‑149 (MQ=255) aTCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTcgcg > 2:1009000/1‑149 (MQ=255) ttCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAt < 1:3455625/149‑1 (MQ=255) cAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAttt < 2:3249301/149‑1 (MQ=255) cAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAttt < 2:912070/149‑1 (MQ=255) cAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAttt < 1:1266905/149‑1 (MQ=255) aGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑g > 2:3753869/1‑149 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGc < 1:4289486/149‑1 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGc < 1:1026801/149‑1 (MQ=255) aGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTg < 1:801348/149‑1 (MQ=255) gATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTTACTAACGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTAGCGACCAAATT‑GGCTgg > 1:3296806/1‑149 (MQ=255) gATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTgg > 2:2069356/1‑149 (MQ=255) gATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACAACCCAACAGGGAGTTCATGTCCAGATTTGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCTTAGCGACCAAATT‑GGCTgg > 1:1831437/1‑149 (MQ=255) aTCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTAATTTCCAGATTTGCGTCTCCGGTTAGGGTAACCATATTAGGCTATTCGCGACCAATTT‑TGCTGGt > 1:2730359/1‑149 (MQ=255) aTCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGAACAGGGAGTTCAAGTCCAGATTGGCGTCACCGGTTAGGGTAACCTTATTCGGCTCTTAGCGACCAAATT‑GGCTGGt > 1:4161942/1‑149 (MQ=255) tCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTc < 2:2452445/149‑1 (MQ=255) cGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCa < 2:475496/149‑1 (MQ=255) gCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAg < 1:1716307/149‑1 (MQ=255) gCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAg < 1:2368162/149‑1 (MQ=255) gCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAATT‑GGCTGGTCAg > 2:3992454/1‑149 (MQ=255) aCCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCGTTCTGACTACCGAACACGGAGGTCATGTACAAATTTGCGTCTACGGGTATGGTAACCATATTAGGCTCATCGCGACCAAATT‑GGCTGTTCAGGt > 2:1184105/1‑149 (MQ=255) ccTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGtt < 2:4246525/149‑1 (MQ=255) cTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGttt < 1:2472122/149‑1 (MQ=255) cTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCCAACAGGGAGTTCATGTCCAGATTTGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGttt > 2:4337044/1‑149 (MQ=255) ttttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGt < 2:237720/149‑1 (MQ=255) tttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTTGCGTCTCCGGTTAGGGTAACCATATTCGGCTCTTCGCGACCAATTT‑TGCTGGTCAGGTTTGTc > 1:4481851/1‑149 (MQ=255) tttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTc < 2:2327139/149‑1 (MQ=255) tttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTc < 2:3330277/149‑1 (MQ=255) tCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGTGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAg > 2:1334702/1‑149 (MQ=255) tCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAAAACGGAGGTAATGTCCAGATTGGCGTCGCCGGGTAGGGTAAACATATTCGGCGCGTAGCGACCCATTT‑TGCGGGTCAGGGTTGTCAg > 1:3593915/1‑149 (MQ=255) cTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGa > 2:92420/1‑149 (MQ=255) aaCACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTATGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTTTCAGAACAATATg > 1:3494652/1‑149 (MQ=255) aaCACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTACGGTTAGGGTAACCTTATTCGGATATTCGCGACCAATTT‑TGCTGGTCAGGTTTGTCAGAACAatatt > 2:4286609/1‑148 (MQ=255) acGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACAACCCAACAGGGAGTTCATGTCCACAATTGCGTCGACCGTTAGGGTAAACATATTAGGCTCTTAGCGACCAAATT‑TGCTGGTCAGGTTTTTCAGAACaaaaatggc > 1:4472312/1‑142 (MQ=255) gggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGGTAGGGTAACCATATTAGGCTCGTCGCGACCAATTT‑GGCGGGTCAGGTTTGTCAGAACAAAATGGGCG‑t > 1:3067255/1‑149 (MQ=255) ggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑Tc < 1:3455387/149‑1 (MQ=255) gcgcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGcc < 1:1930130/149‑1 (MQ=255) cTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACg < 2:4046330/149‑1 (MQ=255) cTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCCAACACGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTAGCGACCAATTT‑GGCGGGTCAGGTTTGTCAGAACAATAAGGGCG‑TCAGCCACg > 1:3786767/1‑149 (MQ=255) tttCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGc < 1:2528567/149‑1 (MQ=255) tttCAGCTTCAGTTTCATGGTCGCTTTCTGACTAACGAACAGGGAGTTCATTTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑TGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGc > 1:4231361/1‑149 (MQ=255) ttCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATTTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑TGCTGGTCAGGTTTGTCAGAACAATAATGGCG‑TCAGCCACGcc > 1:3885366/1‑149 (MQ=255) ttCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGcc < 2:131049/149‑1 (MQ=255) gCTTCAGTTTCATGTTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGt > 2:3564979/1‑149 (MQ=255) cAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGTTTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAAc < 2:2628373/149‑1 (MQ=255) aGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGGTAGGGTAACCATATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAAcc > 2:1534899/1‑149 (MQ=255) aTGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATc > 2:3064453/1‑149 (MQ=255) ggTCGTTTTCTGACTACCGAACTGGGTGTTATTGTCCATTTTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACAATTTT‑GGCTGGTCTGGTTTGTCAGAAAAATTTGGGCG‑TCAGCCACGCCGGGTAAACCGATATCtt < 1:1938840/149‑1 (MQ=255) cGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTg > 1:2271057/1‑149 (MQ=255) gCTTTCTGACTACCGAACTGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTga < 2:4481486/149‑1 (MQ=255) cTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTgag > 1:870542/1‑149 (MQ=255) tttCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTgaga > 1:1696823/1‑149 (MQ=255) tttCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTgaga > 2:1806134/1‑149 (MQ=255) tttCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTGGTCATAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTgaga < 2:1092882/149‑1 (MQ=255) gACTACCGAACAGGGAGTTCTGGTCCAGATTGGCGTCTCCGTTTAGGGTAACCTTATTCGGCTCTTCGCGACAAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TAAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatta < 2:528406/149‑1 (MQ=255) aCCGAACCGGGTGTTCTTGTCCCGTTGGGCGTCTCGGGTTTGGGTAACCTTTTTCGGCTCTTCGCGACCATTTT‑GGCTGGTCTGGTTTGTCAGAAAAATTTGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATtattat < 1:152223/149‑1 (MQ=255) ccGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATg > 2:4148560/1‑149 (MQ=255) aaCAGGTAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGttt < 2:644866/149‑1 (MQ=255) aCAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTc < 2:3723817/149‑1 (MQ=255) cAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCg > 1:1329286/1‑149 (MQ=255) aGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGc > 1:2062834/1‑149 (MQ=255) ggAGTTCATGTCCAGATTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACAAATTT‑GGCTGGTCTGGTTTGTCATAACAATTTGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCaa < 2:1267938/149‑1 (MQ=255) gtgTTCTTTTCCAGATTGGCTTCTCCTGTTTGGGTAAGCTTTTTCGGCTCTTCGCGACAAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCTGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAg < 2:2555771/147‑1 (MQ=255) aGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGc < 2:159063/149‑1 (MQ=255) gTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCg < 2:1448648/149‑1 (MQ=255) aTGTCCAGTTTGGCGCCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACCATTTG‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTGAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTg < 2:2962000/149‑1 (MQ=255) tCCAGATTGGCGTCTCCGTTTATTTTAACCTTATTCGGCTCTTCGCTACAAATTT‑GGCTGGTCAGGTTTGACATAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGtt < 2:271457/149‑1 (MQ=255) tttgggCGTCTCGGGTTGGGGTACCCTTTTGCGGCTCTCCGC‑TCCATTTTGGGGTGGTCTGGTTTTTAATAA‑AATTTGGGGGTTCCGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAtt < 1:4663628/145‑1 (MQ=255) gATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAtt > 1:369666/1‑149 (MQ=255) aTTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAAGTATTATGTTTCGCAAGCGACTGGTTAAttt > 1:2112554/1‑149 (MQ=255) ttGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTc > 1:2651394/1‑149 (MQ=255) ttGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTc > 1:3713431/1‑149 (MQ=255) tgggCGTCTCGGGTTTGGGTAACTTTTGTGGGCTGTGCGCGCCCATTTG‑GGCTGGTCTGGTTTGTCCGAACATTTGGGGCG‑TCCGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTc < 1:1534899/147‑1 (MQ=255) ttctcGGTTTAGGGTAACCTTTTGCGGCTCTTCGCGACAATTTG‑GGCTGGTCAGTTTTTAAAGAACAATGTGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGtt < 2:3213221/148‑1 (MQ=255) ttctcCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGtt < 2:506383/148‑1 (MQ=255) tctcCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTc > 1:2845665/1‑149 (MQ=255) tctcCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTc > 1:1942074/1‑149 (MQ=255) ccGGTTAGGGTACCCTTATGCGGCTCTTCGCTACAAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGt < 2:2537916/149‑1 (MQ=255) ccGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCATTTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGt < 2:2684536/149‑1 (MQ=255) gTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGAt > 2:2873605/1‑149 (MQ=255) | TTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTT‑GGCTGGTCAGGTTTGTCAGAACAATATGGGCG‑TCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGGT > CP009273/1118358‑1118654 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |