| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,386,008 | G→T | 64.8% | Q35K (CAG→AAG) | ycjY ← | S9 homolog non‑peptidase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,386,008 | 0 | G | T | 64.8% | 295.0 / inf | 305 | Q35K (CAG→AAG) | ycjY | S9 homolog non‑peptidase family protein |
| Reads supporting (aligned to +/- strand): ref base G (48/60); new base T (73/122); total (123/182) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 307 total aligned reads displayed.
TCTAACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGATAT > CP009273/1385860‑1386156 | tccaaCTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTg < 2:514980/146‑1 (MQ=255) cTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACt < 1:2744511/149‑1 (MQ=255) cTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACt < 1:3773078/149‑1 (MQ=255) cTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACt < 1:2913107/149‑1 (MQ=255) gACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGa < 2:3753015/149‑1 (MQ=255) gACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCAGGGGGAGATAACACAATTGCCAGATACTGa > 2:3358494/1‑149 (MQ=255) aCGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGAc < 1:4049180/149‑1 (MQ=255) aCGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCAGGGTGAGCTAACACAATTGCCTTATACTGAc > 2:4570099/1‑149 (MQ=255) gcgGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACgg < 2:2901773/149‑1 (MQ=255) gcgGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACgg < 1:1301629/149‑1 (MQ=255) ggCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGt < 2:2705189/149‑1 (MQ=255) tCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTtc < 2:2139541/149‑1 (MQ=255) tCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTtc < 2:4481470/149‑1 (MQ=255) tCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTtc < 1:4413233/149‑1 (MQ=255) gccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGGGAGATAACACAATTGCCTGATACTGACGGGGTTCATC‑aa > 1:1556338/1‑149 (MQ=255) gccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAACCCCCCCCCAGGGGGAGATAACACAAATTCCAGATACAGACGCGGTTcaac‑aa > 1:532663/1‑149 (MQ=255) gccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTATTTTAAGCCCCCACCGGGGTGAGCTAACACAAATGCCAGATAAAGACGGGTTtcctaaa > 2:4337327/1‑144 (MQ=255) ccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑aaa < 1:3504352/149‑1 (MQ=255) tttCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAAtttt < 1:2053404/149‑1 (MQ=255) aCCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAg < 1:4425419/149‑1 (MQ=255) ccgtGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAgg < 2:1287528/146‑1 (MQ=255) cTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAggg < 1:4554954/149‑1 (MQ=255) tGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGac < 2:629140/149‑2 (MQ=255) aTAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAACGCCCCCACCAGGGTGTGATAACACAAATGCCGTATACTGACGGGTTTCATC‑AAATTTTGGTGGGAAAt > 2:4008635/1‑149 (MQ=255) aaGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCACCGGGGGGAGATAACACAAATTCCTTATAATGACGGGTTTCATC‑AAAATTTTGTGGGAAATAg > 1:67380/1‑149 (MQ=255) aaGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGGTGTTTTAAGCCCCCCCCCGGGGGAGGTAAAACAAATGCCTGATAAATAACGGTTTCATCAAAATTTTGGGGGTaaaat > 1:2771690/1‑147 (MQ=255) tGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCa < 2:1086/149‑1 (MQ=255) gCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCAc < 1:2621510/149‑1 (MQ=255) gCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTATTTAAACCCCCCCCCAGGGGGTGATAAAACAATTTCCGTATAAAGACGGGTTTCATC‑AAAATTTTGAGGGAAATATATAAc > 1:2526198/1‑149 (MQ=255) cGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACt < 2:3678954/149‑1 (MQ=255) aaGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTGGTTTACCCCCCCACCGGGGGGTGATAACACAAATGCCGTATAAAGACGGGTTTCATC‑AAATTTTGGTGGGAAATAGATCACTGCAGAc > 1:4664432/1‑149 (MQ=255) aaGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGGTCTTTAACGCCCCCCCCGGGGGGAGATAACACAATTGCCGTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCAAGGCAGAc > 1:2323708/1‑149 (MQ=255) aGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTATTTAAAGCCCCCACCTGGGTGAGATAAAACAATTGCCTTATACTGAAGGGTTTGATA‑AAATTTTGTATGGAAATAGATCACAGCAGaaa > 2:3415347/1‑147 (MQ=255) gCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGGTGTTTAAAGCCCCCCCCAGGGTGTGATAACACAAATTCCGTATACAGAAGGGTTTAATC‑AAAATTTTGAGGGAAAAATATAACAGCACACaa > 1:667745/1‑149 (MQ=255) cAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACaaa < 2:3352864/149‑1 (MQ=255) aTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTTTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAagt > 2:1485748/1‑148 (MQ=255) aTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAaga < 2:177512/149‑1 (MQ=255) tAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAagag < 2:541611/149‑1 (MQ=255) aGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAgaga < 2:2525399/149‑1 (MQ=255) gTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGAt < 2:1593714/149‑1 (MQ=255) tGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTGTTTAAAGCCCCCACCAGGGTGAGATAAAACAAATTCCTTATACAGAAGGGTTTCATA‑AAATTTTTGAGGGTAATAGATAAATGCAGACAAAGAGATg > 1:2234208/1‑149 (MQ=255) gACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATgg < 1:4122597/149‑1 (MQ=255) gACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCACCCGGGGGCGATAACACAAAAGCCAGATACAGACGGGGTTAATC‑CAAATTTTGAGGGGAAAATATCACAGCAGAAAAAGAGATgg > 1:3256868/1‑149 (MQ=255) aCAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGTGAAATAGATCACTGCAGACAAAGAGATGGt < 2:3388415/149‑1 (MQ=255) aCAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGt < 2:3905180/149‑1 (MQ=255) aCAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGt < 1:4589513/149‑1 (MQ=255) aCAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTTAAGCCCCCCCCCGGGTGGGATAACACAAATTCCTTATACATACGGGTTTCATC‑AAATTTTGGTGGGGAATAGATAACAGCACACAAAGAGATggg > 2:4297178/1‑148 (MQ=255) aTCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTTAAGCCCCCCCCAGGGGGTGATAAAAAAAATTCCTTATAATTAAGGGTTTGAAA‑AAAATTTTGTGGGTAAAATATAACAGCAGACACAGAGATGGGTggg > 1:1686739/1‑148 (MQ=255) ccTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGatta < 1:1572623/149‑1 (MQ=255) cTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGattat < 1:3915267/149‑1 (MQ=255) ttCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGc < 2:1119584/149‑1 (MQ=255) tCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCt < 2:2394414/149‑1 (MQ=255) ccGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTTGTCTTTAAACCCCCCACCGGGGTGAGATAACACAAATTCCATATACAGACGGGTTTAATC‑AAATTTTGGATGGAAATAGATCACTGCAGACAAATAGATGGGTGGATTATTGATg > 2:4544953/1‑149 (MQ=255) cAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAg < 1:2167075/149‑1 (MQ=255) cAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAAAGCCCCCACCGGGGTGAGATAACAAAAATTCCAGATAATGACGGGTTTCATA‑AAATTTTTGAGGGAAAAAGATAACAGCAGACAAAGAGATGGTTGGATTCTTGCGGTTAg > 2:1335030/1‑149 (MQ=255) aGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGt < 1:2448008/149‑1 (MQ=255) gTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAAAGCCCCCACCGGGGTGAGATAAAACAAATTCCAGATACTGACGGGTTTCATC‑AAATTTTTGAGGGAAAAATATAACTGCAGACAAAGAGATGGTTGGATTATTTCTGTTAGTg > 2:4593051/1‑149 (MQ=255) ttttGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAg < 1:712707/149‑1 (MQ=255) gCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGAc < 2:1874358/149‑1 (MQ=255) gCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCAGGGTGAGATAACACAAATGCCTGATACAGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGAACACAGCAGACAAAGAGATGGTTGGATTATTTCTGTTAGTGAACCTGAc > 2:3761733/1‑149 (MQ=255) ttCCGGCCGTTTTTTCTTTAAAGCCCCCACCTGGGTGAGATAAAACAATTTCCTTTTAATTACGGGTTTCATA‑AAATTTTTGCGGGAAATATATAACAGCAGACAAAGAGTTGTTTGGATTATTTGTTTTATTGTATGTGTCTttattt > 2:167250/1‑148 (MQ=255) ttCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTTTACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTttatta < 1:1125732/149‑1 (MQ=255) ttCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTttatta < 1:1126434/149‑1 (MQ=255) ttCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTttatta < 1:3968727/149‑1 (MQ=255) tCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTtattat < 2:2439450/149‑1 (MQ=255) ccGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTattatt < 1:3660671/149‑1 (MQ=255) ggCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtca < 1:1068658/149‑1 (MQ=255) ggCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtca < 1:4245016/149‑1 (MQ=255) ggCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtca < 2:1923080/149‑1 (MQ=255) ggCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtca < 2:3605921/149‑1 (MQ=255) cGTTTGTTATTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcatca < 2:3716159/149‑1 (MQ=255) gTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTcatcat < 2:134900/149‑1 (MQ=255) gTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTcatcat > 1:3987111/1‑149 (MQ=255) tttGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCAtt > 1:3858825/1‑149 (MQ=255) tGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTcc < 1:1407135/149‑1 (MQ=255) tttAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAAGAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTcc > 1:1999360/1‑149 (MQ=255) ttAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCt > 1:3841057/1‑149 (MQ=255) tAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTc < 1:3021435/149‑1 (MQ=255) aaCGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCa < 1:2848530/149‑1 (MQ=255) ccccACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAg < 1:913263/149‑1 (MQ=255) cccACCTGGGTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGt < 1:1506644/149‑1 (MQ=255) cccACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGt > 1:4183728/1‑149 (MQ=255) cACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACACAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTg > 1:1241207/1‑149 (MQ=255) aCCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGACATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGt < 2:4242366/149‑1 (MQ=255) gggTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGt < 2:1217752/149‑1 (MQ=255) gggTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGt < 2:289091/149‑1 (MQ=255) ggTGAGATAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCCGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGtt > 2:3862917/1‑149 (MQ=255) gTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTc < 2:3251552/149‑1 (MQ=255) gagaTAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGt < 2:2335551/149‑1 (MQ=255) agaTAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACATAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGtt < 1:3404353/149‑1 (MQ=255) gaTAACACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGttt > 1:10001/1‑149 (MQ=255) aTAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGtttt < 1:4593051/149‑1 (MQ=255) aaCACAATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTaa > 2:2724488/1‑149 (MQ=255) aaCACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTaa < 1:2129024/149‑1 (MQ=255) caATTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGt > 1:1852595/1‑149 (MQ=255) caATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGt > 2:2853626/1‑149 (MQ=255) aaTTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGtt < 1:3086033/149‑1 (MQ=255) aTTGCCTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTg > 2:4629383/1‑149 (MQ=255) gCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTg < 2:771410/149‑1 (MQ=255) ccTTATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGa < 2:4295271/149‑1 (MQ=255) | TCTAACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGACGGGTTTCATC‑AAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGATAT > CP009273/1385860‑1386156 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |