| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,671,110 | C→A | 6.0% | D351Y (GAT→TAT) | pntA ← | pyridine nucleotide transhydrogenase, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,671,110 | 0 | C | A | 6.0% | 986.5 / 29.1 | 257 | D351Y (GAT→TAT) | pntA | pyridine nucleotide transhydrogenase, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base C (102/139); new base A (6/10); total (108/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 269 total aligned reads displayed.
CACGGTGAGCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTCCGTAGTG > CP009273/1670962‑1671258 | ggTGAGCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCaaa > 1:4611854/1‑149 (MQ=255) gTGAGCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCaaaa > 1:4633674/1‑149 (MQ=255) gTGAGCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCaaaa < 2:142150/149‑1 (MQ=255) gTGAGCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCaaaa < 1:1657260/149‑1 (MQ=255) aGCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCa > 1:3686697/1‑149 (MQ=255) gCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCaa < 1:750527/149‑1 (MQ=255) gCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCaa < 1:2148710/149‑1 (MQ=255) gCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCaa < 1:2861604/149‑1 (MQ=255) gCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCaa < 1:4103224/149‑1 (MQ=255) aGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACa > 2:1857083/1‑149 (MQ=255) ggTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAg < 2:2620735/149‑1 (MQ=255) tACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTg < 1:3114743/149‑1 (MQ=255) tACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTg < 1:3209985/149‑1 (MQ=255) tttttCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATAAAAATCAACAGTGatat > 1:3246577/1‑149 (MQ=255) tCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGcc < 1:2599737/149‑1 (MQ=255) cTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGt > 1:3409313/1‑149 (MQ=255) cTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACACTGATATTTCCGt > 1:440044/1‑149 (MQ=255) cAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCt < 2:2384831/149‑1 (MQ=255) gTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCttt < 2:3992521/149‑1 (MQ=255) ttCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTtctc > 1:3743510/1‑149 (MQ=255) cACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTTAGCTGATACCTGAATAGGCGGTGCCGGCCAGGTAATTTAGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATAAAAAACAACATTGATATTGCCGTCTTTCTCtt > 1:1335202/1‑149 (MQ=255) cACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCtt < 2:1262700/149‑1 (MQ=255) cACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATAAAAATCAACAGTGATATTGCCGTCTTTCTCtt > 1:2508717/1‑149 (MQ=255) aCTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATAAAAATCAACAGTGATATTGCCGTCTTTCTCttt < 1:584662/149‑1 (MQ=255) aCTACCCGTGCCGCTTTTTGTGCCGCCAGCGGCAGAGCTGATACCTGAATCGGCGGAGCCGGCCAGGAACAAACGCCCGCACCCATCACGGACACGCCGCGACTCACCACAACATCAAAAACAACAGAGATAAAGCCTACTTtctcaat > 2:2532562/1‑146 (MQ=255) gTGCCGCTTTGTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCAGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCacaac < 2:1352731/149‑1 (MQ=255) ggCCGCTTTTTGTGCCGCCTGCGGCTGCGCGGATACCTGCAGCGGCGGTGCCGGCCAGGTAAGTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACCTCATCAAAATCAACCGTGATATTGCCGTCTTTCTCTTTGCacaaca < 2:2113980/148‑1 (MQ=255) gCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAg > 2:1739871/1‑149 (MQ=255) gCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAg < 2:1668643/149‑1 (MQ=255) cTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTc < 1:4482422/149‑1 (MQ=255) tttttGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTca < 1:1678011/149‑1 (MQ=255) tttttGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTca > 1:4129051/1‑149 (MQ=255) tttttGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACAGCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTca > 2:1377549/1‑149 (MQ=255) ttGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTcagca < 1:2575694/149‑1 (MQ=255) ttGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTcagca < 2:2043045/149‑1 (MQ=255) ttGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTcagca < 1:113084/149‑1 (MQ=255) tgCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGAt < 2:4123763/149‑1 (MQ=255) gccgccTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGAtt < 2:4245343/149‑1 (MQ=255) ccgccTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTa > 2:3574815/1‑149 (MQ=255) cTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGa < 1:1585480/149‑1 (MQ=255) tGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAg > 2:1305373/1‑149 (MQ=255) tGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAg < 2:3214363/149‑1 (MQ=255) gCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAgg < 2:4260625/149‑1 (MQ=255) ggCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGtt < 2:925583/149‑1 (MQ=255) gctgagctgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGttt > 1:64908/1‑149 (MQ=255) gctgagctgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGttt < 1:1017608/149‑1 (MQ=255) gagctgaTACCTGAATCGGCGGTGCCGGCCCGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTCACGAGGTTtgtg > 2:3753860/1‑149 (MQ=255) gagctgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTtgtg > 2:1451282/1‑149 (MQ=255) gagctgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATAAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTtgtg > 1:678373/1‑149 (MQ=255) gctgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATAAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGcc < 1:1514923/149‑1 (MQ=255) tgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGt < 1:2228040/149‑1 (MQ=255) tgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGt > 2:2804008/1‑149 (MQ=255) ccTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGc > 2:2050109/1‑149 (MQ=255) cTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCt > 2:4016277/1‑149 (MQ=255) gAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCtgt < 1:3563040/149‑1 (MQ=255) gAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCtgt < 1:4224356/149‑1 (MQ=255) gAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCtgt > 1:1136765/1‑149 (MQ=255) aaTCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCtgtg > 2:3127886/1‑149 (MQ=255) aaTCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCtgtg > 2:157857/1‑149 (MQ=255) tCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAg < 1:3880260/149‑1 (MQ=255) gTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGc < 1:3797158/149‑1 (MQ=255) tGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCg < 2:2673064/149‑1 (MQ=255) tGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCg < 2:330321/149‑1 (MQ=255) gCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGt < 1:2058087/149‑1 (MQ=255) ccGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTc < 2:1838841/149‑1 (MQ=255) ggCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCgg > 1:4595355/1‑149 (MQ=255) cAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAg > 2:2850055/1‑149 (MQ=255) aagttCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGc < 2:4456075/146‑1 (MQ=255) aaTTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGc < 2:524668/149‑1 (MQ=255) ccGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGa < 2:750146/149‑1 (MQ=255) cGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGAt < 1:3439646/149‑1 (MQ=255) cGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGAt < 2:3400821/149‑1 (MQ=255) gCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATc > 2:4576523/1‑149 (MQ=255) gCACGGATCACGGTCACGCCGCGAATCACCACATCATAAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATc < 1:1897428/149‑1 (MQ=255) ggATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGta < 2:2195324/149‑1 (MQ=255) gATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGtat > 2:2583696/1‑149 (MQ=255) cACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAAc > 1:1402665/1‑149 (MQ=255) aCGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAAcc < 1:3724766/149‑1 (MQ=255) cGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCa > 2:4551821/1‑149 (MQ=255) ggTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCaa < 1:3374162/149‑1 (MQ=255) gTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAAt < 1:3781415/149‑1 (MQ=255) tCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATc < 1:4374830/149‑1 (MQ=255) cgccgcGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACt < 1:1181871/149‑1 (MQ=255) gccgcGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACtt > 2:273845/1‑149 (MQ=255) ccgcGAATCACCACATCATAAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACttt < 2:105606/149‑1 (MQ=255) cgcgAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTg > 1:2478597/1‑149 (MQ=255) gcgAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGa > 2:3919392/1‑149 (MQ=255) gAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGaca > 1:3345462/1‑149 (MQ=255) aaTCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGacac > 1:1032588/1‑149 (MQ=255) aaTCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGacac < 2:566987/149‑1 (MQ=255) accacATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCAtt < 2:4595761/149‑1 (MQ=255) ccacATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCAttt < 1:1739871/149‑1 (MQ=255) cacaTCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCAtttt < 2:3274455/149‑1 (MQ=255) cacaTCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCAtttt < 2:1927714/149‑1 (MQ=255) catcatAAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTcc < 2:3692266/149‑1 (MQ=255) atcatcAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTCCg > 1:158720/1‑149 (MQ=255) atcatcAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTCCg > 1:158609/1‑149 (MQ=255) tcaAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTCCGTAGt < 2:2262259/149‑1 (MQ=255) caAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTCCGTAGTg < 1:2266593/149‑1 (MQ=255) caAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTCCGTAGTg > 2:2966915/1‑149 (MQ=255) | CACGGTGAGCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTCCGTAGTG > CP009273/1670962‑1671258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |