Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 2,170,285 | C→T | 6.4% | A133A (GCG→GCA) | gatY ← | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 2,170,285 | 0 | C | T | 6.4% | 1063.4 / 38.6 | 298 | A133A (GCG→GCA) | gatY | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit |
Reads supporting (aligned to +/- strand): ref base C (128/150); new base T (9/10); total (138/160) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 301 total aligned reads displayed.
ACATCCCATGAGCCGTGCCGATGGCGACCGCCAGGGAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTGAGCGATATCGTCAAATTTCGTGT > CP009273/2170137‑2170433 | cccATGAGCCGTGCCGATGGCGACCGCCAGGGAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCt > 2:3553661/1‑149 (MQ=255) aTGAGCCGTGCCGATGGCGACCGCCAGGGAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGa > 2:3589244/1‑149 (MQ=255) aTGAGCCGTGCCGATGGCGACCGCCAGGGAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGa < 1:1484407/149‑1 (MQ=255) tGAGCCGTGCCGATGGCGACCGCCAGGGAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGAc > 2:3414557/1‑149 (MQ=255) gCCGATGGCGACCGCCAGGGAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACAt < 2:2584688/149‑1 (MQ=255) ccGATGGCGACCGCCAGGGAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATc < 1:1816920/149‑1 (MQ=255) tGGCGACCGCCAGGGAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAg < 1:813498/149‑1 (MQ=255) tGGCGACCGCCAGGGAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAg > 1:1388231/1‑149 (MQ=255) aCCGCCAGGGAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATg < 2:2816106/149‑1 (MQ=255) gCCAGGGAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCa < 2:4586875/149‑1 (MQ=255) ccAGGGAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCaa < 2:1598992/149‑1 (MQ=255) ccAGGGAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCaa < 2:124502/149‑1 (MQ=255) gggAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCTGCCTCGACGCTGACATCAAAGCGATGGCaaaaa < 1:51786/149‑1 (MQ=255) gggAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCTGCCTCGACGCTGACATCAAAGCGATGGCaaaaa < 1:2392762/149‑1 (MQ=255) gggAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCaaaaa < 2:1450880/149‑1 (MQ=255) gggAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCaaaaa < 1:2094237/149‑1 (MQ=255) gggAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCaaaaa < 1:2144099/149‑1 (MQ=255) gggAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCaaaaa > 1:2630521/1‑149 (MQ=255) aaTCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATcc < 2:1825030/149‑1 (MQ=255) aTCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATcca < 2:1942762/149‑1 (MQ=255) aTCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATcca > 2:4104888/1‑149 (MQ=255) aTCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATcca < 2:897469/149‑1 (MQ=255) tCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATccac > 1:1969712/1‑149 (MQ=255) tCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCAGCCTCGACGCTGACATCAAAGCGATGGCAAAAATccac > 1:4055464/1‑149 (MQ=255) cAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATccacc < 2:2144810/149‑1 (MQ=255) aaTTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATccacca > 2:233879/1‑149 (MQ=255) ccGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCTGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACctc < 1:1673748/149‑1 (MQ=255) aggTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACctct > 1:2248881/2‑149 (MQ=255) aggTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCACAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACctct > 1:4589065/2‑149 (MQ=255) gTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCTGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCttt > 2:2973122/1‑149 (MQ=255) tGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGa < 1:1592062/149‑1 (MQ=255) gCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGAc > 1:4140034/1‑149 (MQ=255) ccTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGAcc < 2:4453229/149‑1 (MQ=255) tCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCg > 1:3951833/1‑149 (MQ=255) cGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGt < 2:3863149/149‑1 (MQ=255) ggCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTg < 1:3416971/149‑1 (MQ=255) ggCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTg < 2:2281580/149‑1 (MQ=255) gCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGa > 1:4256319/1‑149 (MQ=255) aaaTTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGaaa < 2:2212927/149‑1 (MQ=255) aTTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCTGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAata < 1:3489329/149‑1 (MQ=255) ttCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAatat < 2:4503200/149‑1 (MQ=255) ttCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAatat < 2:2054006/149‑1 (MQ=255) gcgcCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTgc > 1:1138245/1‑149 (MQ=255) gcgcCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTgc > 1:3473696/1‑149 (MQ=255) cTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCaa < 1:4369085/149‑1 (MQ=255) gAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCaaaa > 2:4376503/1‑149 (MQ=255) gAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCaaaa < 1:2287095/149‑1 (MQ=255) aGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTGTGCCTCGACGCTGACATCAAAGCGTTGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAg < 1:4611023/149‑1 (MQ=255) aGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCTGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAg < 1:868327/149‑1 (MQ=255) cGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGc < 1:307867/149‑1 (MQ=255) ggggTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCa < 1:1255786/149‑1 (MQ=255) gTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAAt < 1:569619/149‑1 (MQ=255) gTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAAt > 1:323566/1‑149 (MQ=255) gTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAAt > 2:2106179/1‑149 (MQ=255) tGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGc > 1:1882395/1‑149 (MQ=255) ggTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCg < 2:3939994/149‑1 (MQ=255) gtgtACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGa < 1:3724951/149‑1 (MQ=255) gtgtACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGa < 2:1522869/149‑1 (MQ=255) tgtACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAg < 2:4614040/149‑1 (MQ=255) tgtACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAg > 1:3896820/1‑149 (MQ=255) tgtACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAg > 2:1936189/1‑149 (MQ=255) gtACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAgg < 1:4635837/149‑1 (MQ=255) gtACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAgg > 1:1022960/1‑149 (MQ=255) cAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGt < 1:107371/149‑1 (MQ=255) aTCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCa < 2:1744239/149‑1 (MQ=255) tCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCAt > 2:4240900/1‑149 (MQ=255) gCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGAc > 2:3164853/1‑149 (MQ=255) gCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGAc < 1:4104888/149‑1 (MQ=255) cATTGACTTGCACATCATCTTCCTGGACGCCAAGTTGCCCCAGCTCCGCCTAGACGCTGACATCAAAGCTATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGat < 2:573906/149‑2 (MQ=255) aTTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAgc < 2:363889/149‑1 (MQ=255) aTTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAgc > 2:674203/1‑149 (MQ=255) gACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCa < 1:3317073/149‑1 (MQ=255) gCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCa > 1:1214006/1‑149 (MQ=255) cacaTCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAg > 1:757888/1‑149 (MQ=255) catcatCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAgaa < 1:721821/149‑1 (MQ=255) catcatCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAgaa < 2:3709925/149‑1 (MQ=255) atcatcTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAgaac < 1:4516100/149‑1 (MQ=255) atcatcTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAgaac < 1:2181394/149‑1 (MQ=255) tcatcTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAgaacg > 1:941496/1‑149 (MQ=255) atcTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAgaacgaa < 1:4449021/149‑1 (MQ=255) ttCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCt < 1:1155581/149‑1 (MQ=255) gtCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCt < 1:4039477/148‑1 (MQ=255) tCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCtt < 2:812881/149‑1 (MQ=255) ccTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTc < 2:4676193/149‑1 (MQ=255) ccTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTc < 2:311580/149‑1 (MQ=255) cTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCt < 1:1919416/149‑1 (MQ=255) tGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTg > 1:1708599/1‑149 (MQ=255) tGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTg > 1:2811277/1‑149 (MQ=255) gccgccAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTGAg < 2:3474764/149‑1 (MQ=255) cAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTGAGCGata < 2:1764991/149‑1 (MQ=255) aaGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTGAGCGatat > 1:631207/1‑149 (MQ=255) aaGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTGAGCGatat < 1:3400465/149‑1 (MQ=255) gTTGCCCCAGCTCTGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTGAGCGATATCg > 2:3797824/1‑149 (MQ=255) ttGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTGAGCGATATCGt < 1:3587346/149‑1 (MQ=255) gCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTGAGCGATATCGTCa > 1:249777/1‑149 (MQ=255) cAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTGTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTGAGCGATATCGTCAAAtt < 1:2951253/149‑1 (MQ=255) gCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTGAGCGATATCGTCAAATTTc > 2:502387/1‑149 (MQ=255) gCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTGAGCGATATCGTCAAATTTc > 2:1048912/1‑149 (MQ=255) gCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTGAGCGATATCGTCAAATTTc > 1:3763181/1‑149 (MQ=255) cTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTGAGCGATATCGTCAAATTTCg < 2:1672164/149‑1 (MQ=255) | ACATCCCATGAGCCGTGCCGATGGCGACCGCCAGGGAATCAATTCCGGTTGCCTCGGCAAATTCACGCGCCTGAGCGGGGTTGGTGTACAACGCATCGGCTTCATTGACTTGCACATCATCTTCCTGGCCGCCAAGTTGCCCCAGCTCCGCCTCGACGCTGACATCAAAGCGATGGCAAAAATCCACCACCTCTTTGACCCGTGAAATATTTTGCGCAAAAGGCAAATGCGAGGCGTCAATCATGACTGAGCGCACGCCAGAACGAACCTTCTGAGCGATATCGTCAAATTTCGTGT > CP009273/2170137‑2170433 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |