| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,762,594 | C→A | 6.7% | R191S (CGC→AGC) | yfjQ → | CP4‑57 prophage; uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,762,594 | 0 | C | A | 6.7% | 823.5 / 10.8 | 241 | R191S (CGC→AGC) | yfjQ | CP4‑57 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base C (96/118); new base A (25/2); total (121/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.73e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 243 total aligned reads displayed.
CAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAATGCTAAAG > CP009273/2762446‑2762741 | gggggATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCCGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCt > 2:884934/1‑149 (MQ=255) ggggATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCtt < 1:2095004/149‑1 (MQ=255) ggggATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACAGGCAAAAGCAGCGCTTACGTATCGcgt > 2:87086/1‑147 (MQ=255) gggATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAATCAGCGCTTAAGTATCGCttt > 2:2052750/1‑149 (MQ=255) gATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTgg < 2:2787938/149‑1 (MQ=255) gATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTgg < 1:796334/149‑1 (MQ=255) gATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTAACGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTAAGTATCGCTTTgg > 2:4382591/1‑149 (MQ=255) gATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTAACCCCCCCAGTGCAGCAGGCACAGGCAAAATCACCCCCTACGTATAGCttttg > 1:127310/1‑147 (MQ=21) aTGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTTCGTTTAACGCCACCATTGCAGCAGGCACTGGCAAAAACAGCGCTTACGTATCGCTTTGGt > 1:665207/1‑149 (MQ=255) aTGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTAAAACCACCAGTGCAGCAAGCACAGGCAAAAACAAAGCATAACTATAGCtttttt > 1:1221367/1‑146 (MQ=18) ggtgAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACAGGCAAAAGCAGCGCTTACGTATCGCTTTTGTGAgg > 2:1349872/1‑149 (MQ=255) gtgAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGa < 1:2777345/149‑1 (MQ=255) tgAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTTCTTTTAACGCCACCAGGTCCGCACGCACAGGCAAAACCACCGCGTACGTATCGCTTTGGTGAGGac > 1:3222830/1‑149 (MQ=255) tgAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTGGCTTTTAACCCCACCAGTTCAGCAGGCACAGGCAAAACAAGCGCATAAGTATAGCATTTGTTAGGaa > 1:3136766/1‑148 (MQ=255) aGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGacca < 1:1035873/149‑1 (MQ=255) gTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGaccac < 2:4571435/149‑1 (MQ=255) tCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTTCTTTTTAAGCCACCAGTTCAGCAGGCAAATGCAAAAACAACCCATAAGTATAGCTTTTTTTAGGtccacc > 1:490275/1‑149 (MQ=255) aGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAg > 2:250241/1‑149 (MQ=255) ggTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCCCCAGTGCAGCAGGCACTGGCAAAAGCAGCGCTTAAGAATCGCATTGGTGAGGACCACCAGc > 1:1884740/1‑149 (MQ=25) ttATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTAACGCCACCATTTCAGCAAGCACAGGCCAAAACAGCGCTTAAGTATAGCGTTTGTGTTGACCACCAcccc > 1:1994391/1‑148 (MQ=21) ttGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTTCTTTTACCGCCACCAGTGCAGCACGCACTGGCAAAAGCACCGCATACGTATAGCTTTGGTGAGGACCACCAGCCCGtt > 2:3371291/1‑149 (MQ=255) ttGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGtt < 1:1686756/149‑1 (MQ=255) gAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACCTATCGCGTTGGTGAGGACCACCAGCCGGTTAc > 2:492642/1‑149 (MQ=255) gAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCAGTGCAGCAGGCACGGGCAAAAGCAGCCCTTACGTATAGCTTTGGTGAGGACCACCCGCCGGTTAc > 1:253577/1‑149 (MQ=25) aGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCAGTGCAGCAGGCACTGGCAAAAGCAGCCCTTAAGTATCGCTTTTGTGAGGACCACCAGCCGGTTACt > 1:3880022/1‑149 (MQ=255) ggCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCAGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAAt > 2:2858971/1‑149 (MQ=255) cGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCGTTTACCGCCACCAGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATAGCTTTGGTGAGGACCACCAGCCCGTTACTGAATCg > 2:3655298/1‑149 (MQ=255) gTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAAACGc > 2:2444853/1‑149 (MQ=255) gTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTAACGCCACCTGTGCAGCAGGCACAGGCAAAAGCAGCGCTTACGTATAGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGc > 2:284245/1‑149 (MQ=255) ttttaGTGCTTGGTATTTTTGAGCGTGTTGAAGAAAATAGGGATTCCATGAAGTCGTTGCTTTTACCGCAACCTGTGCATCAGGCACTGGAAAAAGCAGCGCTTACTTATCGCTTTGTTGAGGACCACCAGCCGGTTACTGAATCGCAg < 2:2730456/145‑1 (MQ=255) gAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGAt < 2:234556/149‑1 (MQ=255) gAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGAt > 2:4158883/1‑149 (MQ=255) aaGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATa < 1:2664971/149‑1 (MQ=255) ggggATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTccc < 2:1228047/149‑1 (MQ=255) gATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCAGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATAGCGTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATAAACTCCCCAc > 2:3537006/1‑149 (MQ=25) tttttGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCAcgc < 2:4071839/149‑1 (MQ=255) tttttGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCAcgc < 1:2913184/149‑1 (MQ=255) tttttGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCAcgc < 1:1758187/149‑1 (MQ=255) ttGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCAcgccgc < 1:4515697/149‑1 (MQ=255) ttGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCAcgccgc < 2:585794/149‑1 (MQ=255) gCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCAGTGCAGCAGGCACTGGCAAAAGCAGCGCTTAAGTATCGCTTTGGTGTGGACCACCAGCCGGTTACTGAATCGCAGATACACTCCCCACGCCGCAGGc > 2:4489360/1‑149 (MQ=25) gtgtGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAg > 2:4235878/1‑149 (MQ=255) gtgtGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTAACCCCACCAGTGCAGCAGGCACTGGCAAAAGCAGCGCTGACGTATAGCGTTTGTGTGGTCCACCAGCCGGTTAATTAATAGCAGATACTATCCCCACCCCCCGGGCAg > 1:469256/1‑149 (MQ=21) tgtgGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAgg < 2:651536/149‑1 (MQ=255) ggAAGAAAAGAGGGATGCCATGCAGTCGTTGGGTTTACCCCCACCGGTGCAGCAGGCACTGGCCAAAGCACCGCTTACGTATCGCGTTGGTTAGGACCACCAGCCCGTTACTGAATCGCAGATACACACCCCACCCCGCTGGCAGGATg > 1:2313416/1‑149 (MQ=21) ggAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCCCCAGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGTGGACCACCAGCCGGTTACTGAATAGCAGATACTCTCCCCACGCCGCTGGCAGGATg > 2:2219586/1‑149 (MQ=255) ggAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATg > 2:3073341/1‑149 (MQ=255) gaagaaAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATga < 2:3595629/149‑1 (MQ=255) gaaAAGAGGGATGCCATGCAGTCGTTGCTTTTAACGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTAAGTATAGCTTTTGTGTTGTCCACCAGCCGGTTACTGAATAGCACATAAAATCCCCACGCCGCTGGCAGGATgtgat > 1:1924792/1‑148 (MQ=21) gaaAAGAGGGATGCCATGCAGTCGTTGCTTTTAACCCCACCAGTTCAGCAGGCACAGGCAAAAGCAGCGCTTAAGTATAGCGTTTGTGAGGACCACCCCCCGGTTAATGAAACGCAGATAAACTCCCCACCCCGCTGGCAGGAGGagag > 1:4128949/1‑149 (MQ=21) aaaGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCa < 1:765338/149‑1 (MQ=255) aaGAGGGATGCCATGCAGTCGTTGGTTTTTCCCCCACCAGTGCAGCAGGGACAGGCAAAAGCAGCGCTTTAGTATAGCTTTGGGGAGGACCACCAGCCGGGTAAGGAATAGCAGATACAAAACCCCCCCCCCTGGCCGGAGGGGAGCaa > 2:1591697/1‑149 (MQ=16) aaGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCaa < 1:2330317/149‑1 (MQ=255) agagGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAAt < 1:3571476/149‑1 (MQ=255) gagGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTTCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGTGGACCACCCGCCGGGTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATTAGAGCAATg > 2:2560445/1‑149 (MQ=21) gagGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGGATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACACTCCCCACGCCGCTGGCCGGATGAGAGCAATg > 2:765068/1‑149 (MQ=255) ggATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGAcc < 1:4271585/149‑1 (MQ=255) ggATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGAcc < 1:4467058/149‑1 (MQ=255) gATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCt < 1:2282439/149‑1 (MQ=255) aTGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCtt < 1:37426/149‑1 (MQ=255) tGCCATGCAGTCGTTGCTTTTAACGCCACCAGTGCAGCAGGCACAGGCAAAATCAGCGCTTACGTATCGCTTTTGTGAGGACCACCAGCCGGTTACTGAATAGCAGATAATCTACCCACGCCGCAGGCAGGATTAGAGCAAAGAcaatt > 2:4039534/1‑145 (MQ=255) aGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGaccacc < 2:3527684/149‑1 (MQ=255) gTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATc < 2:2684742/149‑1 (MQ=255) ttGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCa > 1:1002340/1‑149 (MQ=255) ttGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCa < 2:3737665/149‑1 (MQ=255) gCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGc < 1:4187122/149‑1 (MQ=255) cTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACGTTTGGACCACCTATCAGCg < 2:2532437/149‑1 (MQ=255) ttttACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCgg > 1:4591669/1‑149 (MQ=255) ttttACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCgg > 2:382571/1‑149 (MQ=255) tACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGAtt < 2:4123545/149‑1 (MQ=255) aCCGCCACCTGTGCAGCAGGCACTGGCACAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTc > 2:2251914/1‑149 (MQ=255) cGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCaa < 1:2162418/149‑1 (MQ=255) cGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCaa > 2:3452876/1‑149 (MQ=255) gCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAg < 2:329138/149‑1 (MQ=255) cACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGaa > 2:1797805/1‑149 (MQ=255) aCCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGaaa > 2:2979603/1‑149 (MQ=255) ccTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGaaaa < 1:964991/149‑1 (MQ=255) gtgCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCt < 1:2567792/149‑1 (MQ=255) cagcagGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGAt < 1:1591697/149‑1 (MQ=255) agcagGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGAtt < 1:1449499/149‑1 (MQ=255) gcagGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTa > 2:551199/1‑149 (MQ=255) cagGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTaa < 2:1346531/149‑1 (MQ=255) ggCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAgg > 2:1493299/1‑149 (MQ=255) ggCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAgg > 2:2135378/1‑149 (MQ=255) ggCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAgg > 1:4364001/1‑149 (MQ=255) ggCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAgg > 2:1378021/1‑149 (MQ=255) ggCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAgg > 1:4010762/1‑149 (MQ=255) cACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGc < 1:3050665/149‑1 (MQ=255) aCTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCg > 1:3414465/1‑149 (MQ=255) cTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCgg > 2:2792994/1‑149 (MQ=255) cAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTc > 2:1107141/1‑149 (MQ=255) gcagcGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTgg > 1:180932/1‑149 (MQ=255) agcGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGc < 2:3043826/149‑1 (MQ=255) gcgcTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCg < 1:2893138/149‑1 (MQ=255) ctgaCGTCTCGCTTTGGTGAGGACCACCAGCCGGTTACTGACTCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTaa < 1:3676903/146‑1 (MQ=255) ttACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAAt > 2:1926017/1‑149 (MQ=255) aCGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAATGc < 2:2000842/149‑1 (MQ=255) aCGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAATGc > 1:2343455/1‑149 (MQ=255) aTCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAATGCTaaa > 2:1439588/1‑149 (MQ=255) tCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAATGCTAAAg > 2:4584421/1‑149 (MQ=255) | CAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAATGCTAAAG > CP009273/2762446‑2762741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |