| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,835,291 | T→G | 13.7% | C315G (TGC→GGC) | ascB → | cryptic 6‑phospho‑beta‑glucosidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,835,291 | 0 | T | G | 13.7% | 679.5 / 11.7 | 292 | C315G (TGC→GGC) | ascB | cryptic 6‑phospho‑beta‑glucosidase |
| Reads supporting (aligned to +/- strand): ref base T (101/138); new base G (45/4); total (150/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.23e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 294 total aligned reads displayed.
TATCGATGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTACGATCGTTA > CP009273/2835143‑2835439 | tCGATGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTCTCTTTAAGCTATTACGCCTCGCGCTgc > 2:3023184/1‑149 (MQ=255) tCGATGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGGTTGTCTCTTTCAGCGCTTACGCCTCGCGCTgc > 2:2830311/1‑149 (MQ=255) gATGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTTTGTCTTTCAGCTATTAAGCCTCGCGCTgcgc > 1:1608444/1‑149 (MQ=255) gATGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGGTTGTCTCGTTCAGCAAATAAGCCACGCGCGgcgc > 1:2390809/1‑149 (MQ=255) aTGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGcc < 2:1971160/149‑1 (MQ=255) gtgCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTc < 2:2198439/149‑1 (MQ=255) cAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTcggc < 2:1822566/149‑1 (MQ=255) ggCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTCTTACGCCTCGCGCTGCGCCTcggcgg > 2:4006738/1‑149 (MQ=255) gcgcGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGga < 2:4053115/149‑1 (MQ=255) gcgGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGgaga < 2:3653890/149‑1 (MQ=255) cgGGGCACTTATACGGCTTACTCTTCCCGCGTATTCAGATAAAAAGGTGTAACCATCAAAATAGCACCGGTCGATGATGTAATCCTGTTTAAAACCGTCGATTTTGTCTCTTTAAGCTATTACTCCTCGCTCTGCGACTCGGCGGTGAt < 2:429737/149‑1 (MQ=255) gggCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGa < 2:3777591/149‑1 (MQ=255) gggCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTCTCTTTCAGCTATTACGCCGCGCGCGGCGCCGCGGCGGAGCTGa > 2:2093678/1‑149 (MQ=255) gCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAAc < 2:3161627/149‑1 (MQ=255) aCGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGc < 2:903516/149‑1 (MQ=255) gTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTATTTAAGCTATTAAGCCACGCGCTGCGCCTCGGCGGAGATGTACGCca > 1:3455201/1‑149 (MQ=255) tATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCcaa > 2:2270456/1‑149 (MQ=255) tATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTAAGCTATTACGCCGCGCGCTGCGCCTCGGCGGAGATGAACGCcaa > 2:1794694/1‑149 (MQ=255) tATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTATCTTTCAGCTATTACGCCTCGCGCGGCGCCACGGCGGAGATTAACGCcaa > 1:1057352/1‑149 (MQ=255) aTCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCcaac > 2:261034/1‑149 (MQ=255) ccGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCcaacaa < 1:3101892/149‑1 (MQ=255) ccGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCcaacaa < 1:4227486/149‑1 (MQ=255) ccGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCcaacaa < 2:2331370/149‑1 (MQ=255) gCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTAAGCTAATAAGCCACGCGCTGCGCCCCCGCGGATAATAACCCCAACAAcag > 1:2279611/1‑149 (MQ=255) gCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTCTCTTTCAGCTATTACGCCGCGCGCGGCGCCGCGGCGGAGATGAACGCCAACAAcag > 2:1502569/1‑149 (MQ=255) ttACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAAcagca < 1:3550665/149‑1 (MQ=255) aCTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGt < 1:2955926/149‑1 (MQ=255) aCTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGt > 2:85369/1‑149 (MQ=255) gCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTTTGTATTTAAGCTAATAAGCCCCGCGCGGCGCCACGGCGGGGATTAACGCCAACAAAAACCGTgcggc > 1:3199546/1‑149 (MQ=255) cgcgTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGaa < 1:3664625/149‑1 (MQ=255) tATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTTTCTCTTTCAGCGATTACGCCTCGCGCGGCGCCTCGGCGGAGATGAACGCCAACAACACCAGTGCGGCGAACgtg > 1:2686697/1‑149 (MQ=255) tATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTTTATAATTGAGCTATTAAGCCACGCGCAGCGCCACCGCGGCGATGAAACCCAACAAAAACAGTGCGGCGAACctg > 1:3617720/1‑149 (MQ=255) aTTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACgtgg < 1:2563788/149‑1 (MQ=255) tCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACgtggtg < 1:204696/149‑1 (MQ=255) cgcgAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTTTGTCTTTCAGCGATTAAGCCACGCGCTGCGCCGCGGCGGAGGGGAACGCCAACAAAAGCAGAGCGGCGACCCGGGTGaa > 1:2004675/1‑149 (MQ=255) gcgAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGaaa < 1:4348326/149‑1 (MQ=255) gagAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGaaa < 1:4296782/147‑1 (MQ=255) cgAAAAAGGGGTAACCATCAACACAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGTGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAAt < 1:2240215/149‑1 (MQ=255) cgAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAAt < 1:2049312/149‑1 (MQ=255) gAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATc < 1:2504979/149‑1 (MQ=255) aaaaaGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTCTCTTTCAGCTCTTACGCCTCGCGCTGCGCCGCGGCGGAGATGAACGCCAACAAAATCAGTGCGGCGAACGTGGTGAAATCg > 2:109392/1‑149 (MQ=255) aaaGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCGGCGCCTCGGCGGCGATGAACGCCAACAACAGCAGTGCGGCGAACGGGGTGAAATCGCt > 2:2358955/1‑149 (MQ=255) aaGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTg < 1:1809246/149‑1 (MQ=255) aaGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTg < 1:4143540/149‑1 (MQ=255) aGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCGATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGCACCTGGGGAAATAGCTGc > 2:1253878/1‑149 (MQ=255) ggggTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTTTATATTTCAGCTATTAAGCCGCGCGCGGCGCCTCGGCGGAGATGAACCCCAACAACACCAGTGCGGCGAACGTGGGGTAATAGCTGCg > 1:2089729/1‑149 (MQ=255) ggggTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCg < 1:2264326/149‑1 (MQ=255) gggTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGt < 2:4248780/149‑1 (MQ=255) gTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTaa < 1:3338857/149‑1 (MQ=255) aCCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATTAAAGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATcc > 2:1521720/1‑149 (MQ=255) aTCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTCTCGTTCAGCGAATACGCCGCGCGCGGCGCCGCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTa > 2:3870120/1‑149 (MQ=255) tCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTTTGTCTTTCAGCGATTAAGCCTCGCGCGGCGCCACGGCGGCGATGAACCCCAACAACAGCACTGCGGCGAACGTGGTGTAATAGCGGCGTAAAACGTAt > 1:1544532/1‑149 (MQ=255) caacaaAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTTTCTATTTGAGCTATTACGCCACGCGCGGCGCCGCGGCGGGGATTAAACCCAACAAAAGCACTGCGGCGAACGGGGGGAAAAAGCAGCGTAATACGTATc > 1:3712438/1‑149 (MQ=255) caacaaAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATc < 1:57633/149‑1 (MQ=255) aacaaAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTTTGTCGTTCAGCGATTAAGCCGCGCCCGGCGCCACGGCGGCGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAAAACGTATCt > 2:3181979/1‑149 (MQ=255) acaaAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTCTCGTTGAGCGATTACGCCGCGCGCTGCGCCTCGGGGGAGATGTACGCCAACAACAGCAGTGCGGCGTACGTGGTGAACTAGCGGCGTAATCCGTATCTa > 2:1602242/1‑149 (MQ=255) caaAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTGTCGTTCAGCGATTTAGCCCCGCGCGGCGCCGCCGCGGCGATGAACGCCCACAACAGCACTGCGGCGAACCTGGTGAAATAGCGGCCTAATACCTATATAc > 1:4468991/1‑149 (MQ=255) aaGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAg > 2:1902796/1‑149 (MQ=255) aaGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATATACAg > 2:738468/1‑149 (MQ=255) aaGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTCTCTTTCCGCGATTACGCCGCGCCCGGCGCCCCGGCGGAGATGAACGCCCACCACAGCCGTGCGGCGCCCGTGGTGAAAACGCGGCGGAATCCGGCTCTACac > 2:1740850/1‑148 (MQ=255) aGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTATCTTTAAGCTATTACGCCACGCGCGGCCCCTCGGCGGAGATGAAAGCCAACCACACCAGTGCGGCGAACGGGGTGAAATCGCTGCGTAATCCGTATCTACAgg > 2:827516/1‑149 (MQ=255) aGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGAGTTTGTCTCGTTCAGCTATTAAGCCTCGCGCGGCGCCTCGGCGGAGATGAACGCCAAAAACAGCAGTGCGGCGAACGTGGTGAAATAGCTGCGTAATCCGTATATACacg > 1:3448687/1‑147 (MQ=255) cACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTg < 2:71137/149‑1 (MQ=255) cACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTg < 1:212485/149‑1 (MQ=255) gatgatGAAATCCTGAAAAACACCGTCGATTTTTTATCTTTCAGCTATTAACCCACGCGCTGCGCCGCGGCGGAGATGAAAGCCAACAACAGCAGTGCGGCGAACGGGGTGAAAACGCTGCGTAATCCGGATATAAAGGTGAGCGActg > 2:2742528/1‑149 (MQ=255) gatgaAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGActgggg < 1:4660709/149‑1 (MQ=255) atgaAATCCTGAAAAACACCGTCGATTTTTTCTCGTTCAGCGATTACCCCGAGCGCGGCGCCACGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAAACGCAGCGGAATACGTATCAACAAGTGAGCGActggggc > 1:769582/1‑149 (MQ=255) tgaAAACCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGActggggct < 1:3795883/149‑1 (MQ=255) tCCTGAAAAACACCGTCGAGTTTGTCTCGTTCAGCGATTACGCCGCGCGCGGCGCCACCGCGGCGATGAACCCCAACAACACCACTGCGGCGCACGGGGTGAAAACGCGGCGTAATCCGTATCTACAGGTGAGCGAcaggggcgggggc > 2:4321441/1‑148 (MQ=255) ccTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGaa < 1:1166993/149‑1 (MQ=255) cTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCGGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTCCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAAt < 1:3290142/149‑1 (MQ=255) aaaaaCACCGTCGATTTTGTATATTTAATCTATTAAGCCACGCGCTGCGCCTCGGCGGAGATGTACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATACGTATCTACAAGTGAGCGCCGGGGGCTGGGGGATTGa > 2:1337800/1‑149 (MQ=255) cacCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCAc < 2:4675261/149‑1 (MQ=255) cGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCGCGGCGGAGATGAACGCCAACAACCGCAGTGCGGCGAACGTGGTGAAATCGCGGCGTAATCCGTATCTACAGGTGCGCGACTGGGGCTGGGGAATTGATCCACTCg < 1:2778220/149‑1 (MQ=255) gTCTATTTTGTCTCTTTCAGCTATTCCGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACCGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCgg < 1:3996419/149‑1 (MQ=255) gTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGACTTGATCCACTCgg > 2:4502173/1‑149 (MQ=255) gTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCAAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCTTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCgg < 1:554868/149‑1 (MQ=255) tcttttttGTCTATTTCAGCTATTACGCCGCGCGCTGCGCCTCGGCGGAGATGAACGCAAACAACAGCAGTGGGGCTAACGTGGTTAAATGGCTGCGTAATCCGAATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGt < 1:3571997/145‑1 (MQ=255) tCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGCATTGATCCACTCGGt > 1:3678831/1‑149 (MQ=255) cGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGTAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTc < 1:173800/149‑1 (MQ=255) gATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCt > 2:4448894/1‑149 (MQ=255) aTTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTg > 1:2079048/1‑149 (MQ=255) ttttGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGc > 1:2619301/1‑149 (MQ=255) ttGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGt > 2:1377431/1‑149 (MQ=255) tGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTa < 2:1118647/149‑1 (MQ=255) tGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAACAGTGCGGCGAACGTGGTGAAATAGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGtc > 2:590192/1‑148 (MQ=255) gTCTCTTTCCGCGATTACGCCTCGCGCGGCGCCGCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTTTCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTAt < 1:1366795/149‑1 (MQ=255) ctctTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCa < 2:3455201/149‑1 (MQ=255) gCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAat > 1:1962672/1‑149 (MQ=255) tATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAatat < 2:1021969/149‑1 (MQ=255) aTTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATatg > 2:1759251/1‑149 (MQ=255) ttACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATatga < 2:1608576/149‑1 (MQ=255) tACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATatgat < 2:2496842/149‑1 (MQ=255) aCGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATAACCATGAATatgatg > 1:1085972/1‑149 (MQ=255) gCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTa > 1:3079424/1‑149 (MQ=255) gCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTa < 2:1427118/149‑1 (MQ=255) gCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTa < 2:3262891/149‑1 (MQ=255) cTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTACg < 2:2283071/149‑1 (MQ=255) tCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATAACCATGAATATGATGTACGa > 2:3616035/1‑149 (MQ=255) gcgcTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTACGATc < 2:25414/149‑1 (MQ=255) | TATCGATGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTACGATCGTTA > CP009273/2835143‑2835439 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |