| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,309,359 | C→A | 5.6% | T5T (ACG→ACT) | infB ← | translation initiation factor IF‑2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,309,359 | 0 | C | A | 5.6% | 1124.6 / 31.2 | 292 | T5T (ACG→ACT) | infB | translation initiation factor IF‑2 |
| Reads supporting (aligned to +/- strand): ref base C (146/129); new base A (10/7); total (156/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 296 total aligned reads displayed.
CTGAATTTTTCTGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCG > CP009273/3309211‑3309506 | cTGAATTTTTCTGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATc > 1:2131100/1‑149 (MQ=255) aTTTTTCTGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTa > 2:1329425/1‑149 (MQ=255) aTTTTTCTGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTa > 1:4469494/1‑149 (MQ=255) ttttCTGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCCGCGTTTTAATCGTTACa > 2:1307024/1‑149 (MQ=255) ttCTGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATc > 1:3658926/1‑149 (MQ=255) tGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGt > 2:4341251/1‑149 (MQ=255) gATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTc > 2:1240995/1‑149 (MQ=255) gATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTc < 1:4370037/149‑1 (MQ=255) ttCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCAt < 1:4280805/149‑1 (MQ=255) cAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGc < 2:1403087/149‑1 (MQ=255) cAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGc < 1:3522938/149‑1 (MQ=255) gtggtCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGt < 2:4182095/149‑1 (MQ=255) tggtCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGtt < 2:1044851/149‑1 (MQ=255) atcaaAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATAGTTACATCTGTCATGCTGttccttcc > 1:3858937/1‑149 (MQ=255) tcaaAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTtccttcct < 2:3726802/149‑1 (MQ=255) aaaGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGc < 1:1062689/149‑1 (MQ=255) tCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACa > 2:1338283/1‑149 (MQ=255) tGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGt > 1:230494/1‑149 (MQ=255) tGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGt < 2:4193833/149‑1 (MQ=255) gTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGtt < 2:3623535/149‑1 (MQ=255) tttCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGttt < 1:1850601/149‑1 (MQ=255) tttCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGttt > 1:4122213/1‑149 (MQ=255) ctctTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCGGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTttatt < 1:1289631/149‑1 (MQ=255) ctctTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTttatt > 1:3137463/1‑149 (MQ=255) tctTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTttatta < 1:120299/149‑1 (MQ=255) ttGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACg > 2:914322/1‑149 (MQ=255) gCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTc < 2:4045959/149‑1 (MQ=255) aGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGt > 2:4659574/1‑149 (MQ=255) aGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGt > 2:70027/1‑149 (MQ=255) aGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGt < 2:2916491/149‑1 (MQ=255) aGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGt > 1:2461336/1‑149 (MQ=255) gACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTc > 1:1470005/1‑149 (MQ=255) gACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTc > 2:986616/1‑149 (MQ=255) gACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATAGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTc > 2:330437/1‑149 (MQ=255) gACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATAGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTc > 2:2671902/1‑149 (MQ=255) cacaGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCAc < 1:426366/149‑1 (MQ=255) acaGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCAcc < 2:1048234/149‑1 (MQ=255) caGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCg > 1:1442949/1‑149 (MQ=255) gagTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGaa > 2:3050835/1‑149 (MQ=255) gtcgtcAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAAcc > 2:2719938/1‑149 (MQ=255) tcgtcAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCa > 2:4557900/1‑149 (MQ=255) tcgtcAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCa < 1:550054/149‑1 (MQ=255) cgtcAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAg < 2:3097374/149‑1 (MQ=255) tcAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCa > 1:720230/1‑149 (MQ=255) agcagACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCaaa < 2:3276835/149‑1 (MQ=255) gcagACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTAGTCACCGAACCAGCAAat > 1:3631231/1‑149 (MQ=255) cagACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAata < 2:2504989/149‑1 (MQ=255) aCTTCCGGATACCTGCATCAGCAAATTGTTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTa > 1:3732927/1‑149 (MQ=255) tCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACgg < 2:3839604/149‑1 (MQ=255) ggATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCa < 2:3540021/149‑1 (MQ=255) gATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATAGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAg > 1:1998370/1‑149 (MQ=255) aTACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATAGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGc > 1:3563256/1‑149 (MQ=255) tACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGcc > 1:627563/1‑149 (MQ=255) aCCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCa < 2:398893/149‑1 (MQ=255) cTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATa > 1:3036074/1‑149 (MQ=255) cATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATc < 1:3576429/149‑1 (MQ=255) aTCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCa > 2:805712/1‑149 (MQ=255) aTCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCa > 2:1161004/1‑149 (MQ=255) tCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAg > 2:1839030/1‑149 (MQ=255) cAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGt < 2:2290788/149‑1 (MQ=255) gCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGc > 1:1376968/1‑149 (MQ=255) cAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCt < 1:1187562/149‑1 (MQ=255) aaTTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTcc > 2:4496766/1‑149 (MQ=255) aTTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCg < 2:1975823/149‑1 (MQ=255) aTTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCg > 2:3337332/1‑149 (MQ=255) aTTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCg > 1:1683032/1‑149 (MQ=255) tGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCttt < 2:2131100/149‑1 (MQ=255) cAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTtcgt > 2:1365701/1‑149 (MQ=255) cAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTtcgt < 1:1572471/149‑1 (MQ=255) cAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTtcgt < 1:1572719/149‑1 (MQ=255) ggCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTtcgtcg > 2:1004390/1‑149 (MQ=255) gCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCgg < 1:2561259/149‑1 (MQ=255) cGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGt < 1:3673547/149‑1 (MQ=255) ttCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCa > 2:859679/1‑149 (MQ=255) ttCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCa < 1:2784963/149‑1 (MQ=255) cACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCaagg < 1:1640406/149‑3 (MQ=255) aCGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAAccc < 1:3438067/149‑1 (MQ=255) aCGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAAccc > 2:4159776/1‑149 (MQ=255) cGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCt < 1:2572501/149‑1 (MQ=255) cGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCt > 1:1513443/1‑149 (MQ=255) aGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCg > 1:4009415/1‑149 (MQ=255) aGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCg > 1:3620202/1‑149 (MQ=255) aGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCg > 1:3290347/1‑149 (MQ=255) tGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATc > 2:2696841/1‑149 (MQ=255) tGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATc > 2:1396490/1‑149 (MQ=255) gTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCa > 2:2695611/1‑149 (MQ=255) gTCGCTCTGCGGCCAGCGTTTTAATAGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCa < 1:74561/149‑1 (MQ=255) tCGCTCTGCGGCCAGCGTTTTAATAGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAg > 1:2271056/1‑149 (MQ=255) gCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGatc < 2:1617700/149‑1 (MQ=255) gCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGatcatc > 1:3327620/1‑149 (MQ=255) gCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGatcatc > 2:3392691/1‑149 (MQ=255) ccAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGAtcatca > 1:950249/1‑149 (MQ=255) cAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCCACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCaa < 2:782053/149‑1 (MQ=255) aGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAAt < 2:3772098/149‑1 (MQ=255) aGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAAt > 2:591873/1‑149 (MQ=255) ttttAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGccc > 2:2407318/1‑149 (MQ=255) tAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGt > 2:3440123/1‑149 (MQ=255) aTCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTc < 1:2948008/149‑1 (MQ=255) aTCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTc < 1:1011405/149‑1 (MQ=255) tCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCg > 1:4618492/1‑149 (MQ=255) | CTGAATTTTTCTGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCG > CP009273/3309211‑3309506 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |