| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,603,226 | C→T | 6.0% | A217V (GCT→GTT) | yhhQ → | DUF165 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,603,226 | 0 | C | T | 6.0% | 1077.0 / 36.1 | 300 | A217V (GCT→GTT) | yhhQ | DUF165 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (145/137); new base T (10/8); total (155/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 309 total aligned reads displayed.
GATGCCTTTATGGCTGAACACTGGATGGAAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGT > CP009273/3603078‑3603374 | cTTTATGGCTGAACACTGGATGGAAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGc > 1:4429462/1‑149 (MQ=255) tttATGGCTGAACACTGGATGGAAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCa > 2:1740580/1‑149 (MQ=255) ggCTGAACACTGGATGGAAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGa < 1:2240676/149‑1 (MQ=255) ttaaCACTGGATGGAAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGtt < 1:3126763/147‑1 (MQ=255) aaCACTGGATGGAAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGTTTTGCAGGCGAGTTaa > 2:1856452/1‑149 (MQ=255) cTGGATGGAAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGt < 2:2702127/149‑1 (MQ=255) cTGGATGGAAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTACTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGt > 1:3583578/1‑149 (MQ=255) tggatggaAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGtt < 1:1707801/149‑1 (MQ=255) tggaAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGtt > 2:1471380/1‑149 (MQ=255) ggaAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTa < 1:886390/149‑1 (MQ=255) gaAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTAt < 1:2432658/149‑1 (MQ=255) cgcTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGtt < 2:965857/149‑1 (MQ=255) gcTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTtg < 2:2953235/149‑1 (MQ=255) tGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTtgtg < 2:541671/149‑1 (MQ=255) tGGTCGATTACTGTTTCAAAGTGTTAATAAGTATAGTTTTCTTCCTGCCAATGTATGGCGTATTACTAAATATGCTGTTGAAAAGACTGGCAGATAAATACCAAATCAAAGCTTTTCAGGCGAGTTAAAGGTTAGTTATCAGAGTtgtg > 1:4079299/1‑149 (MQ=255) gTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGAt < 1:3470867/149‑1 (MQ=255) gTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGAt > 2:774187/1‑149 (MQ=255) gATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAg > 2:2797464/1‑149 (MQ=255) aTTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAga < 1:4131248/149‑1 (MQ=255) aTTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAga > 1:1771745/1‑149 (MQ=255) tACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAgatg < 1:2461279/149‑1 (MQ=255) aCTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAgatgg > 1:1078924/1‑149 (MQ=255) tGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAgatggat > 2:2680592/1‑149 (MQ=255) gTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAgatggatg > 1:3434782/1‑149 (MQ=255) tttCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGatga < 2:705915/149‑1 (MQ=255) tCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGatgaat < 2:381758/149‑1 (MQ=255) aaaGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGatgaatga > 1:154318/1‑149 (MQ=255) aaGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGTTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAg > 1:1491186/1‑149 (MQ=255) aaGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGTTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAg > 1:1491905/1‑149 (MQ=255) aaGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAg > 2:1262331/1‑149 (MQ=255) aGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGc > 1:1136553/1‑149 (MQ=255) gtgtTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGcc < 1:2360595/149‑1 (MQ=255) tgtTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCg > 2:2294840/1‑149 (MQ=255) gtTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGt < 2:2532137/149‑1 (MQ=255) gtTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGt < 2:2138296/149‑1 (MQ=255) gtTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGt < 2:1128739/149‑1 (MQ=255) aaTCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTAt > 2:3797573/1‑149 (MQ=255) aTCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATg > 1:3724432/1‑149 (MQ=255) tCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATgg < 2:3974609/149‑1 (MQ=255) cAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGc < 1:3786522/149‑1 (MQ=255) gTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGTTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCg > 2:4148164/1‑149 (MQ=255) gTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCg > 2:2666600/1‑149 (MQ=255) aTCGTTTTCTTCCTGCCAATGTCTGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGtt < 1:488016/149‑1 (MQ=255) aTCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGtt < 1:2828499/149‑1 (MQ=255) aTCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGtt < 1:2011208/149‑1 (MQ=255) gTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTAt < 2:1564664/149‑1 (MQ=255) ttttCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGTAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATc < 1:3387242/149‑1 (MQ=255) ttttCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATc < 2:3421456/149‑1 (MQ=255) ttttCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATc < 1:2334147/149‑1 (MQ=255) ttttCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGACGGATGAATGAGCCGTTATGGCCGTTTATc < 1:2095411/149‑1 (MQ=255) tttCTTCCTGCCTATGTATGGCGTATTACTCTATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCg < 1:4566530/149‑1 (MQ=255) tcttcCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGaa > 2:1823341/1‑149 (MQ=255) tGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGgaag > 2:2570459/1‑149 (MQ=255) gCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGgaaga < 2:171522/149‑1 (MQ=255) cAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGaagaag < 2:3263837/149‑1 (MQ=255) aTGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTc < 1:4003595/149‑1 (MQ=255) aTGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATg < 1:4362350/149‑1 (MQ=255) tGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATgc < 2:3414583/149‑1 (MQ=255) tATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGTTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAAt > 1:3025902/1‑149 (MQ=255) aTTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATc > 2:203901/1‑149 (MQ=255) ttACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCt < 1:1207623/149‑1 (MQ=255) tACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTg < 1:595740/149‑1 (MQ=255) cTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGt < 2:1079191/149‑1 (MQ=255) aaTATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTaa > 1:1435178/1‑149 (MQ=255) tatGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAat > 1:2958894/1‑149 (MQ=255) gCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATg > 2:4230737/1‑149 (MQ=255) tGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTc > 1:4518882/1‑149 (MQ=255) tGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTc > 1:2627579/1‑149 (MQ=255) aaaaGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAAt < 2:2085913/149‑1 (MQ=255) aaaGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGTAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAAtt > 2:810343/1‑149 (MQ=255) aaaGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTGGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAACGGAAGACGTCAATGCGCAATCTGGTTAAATATGTCGGAAtt > 2:3188255/1‑149 (MQ=255) aaGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATTTCGGAATTg > 1:1917285/1‑149 (MQ=255) gACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGc > 2:4051624/1‑149 (MQ=255) aCTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGcc < 2:4450232/149‑1 (MQ=255) aCTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGcc < 2:444964/149‑1 (MQ=255) cTGGCAGATAAATCCGAAATCAACGTTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCct < 1:1868274/149‑1 (MQ=255) cTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCct < 2:3758717/149‑1 (MQ=255) ggCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCCGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGACGAAGTCAATGCGCAATCTGGGTAAATATGTCGGAATTGGCcggc > 2:4341285/1‑149 (MQ=255) ggCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTTGCctgc > 1:1371548/1‑149 (MQ=255) ggCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGTCctgc > 2:175904/1‑149 (MQ=255) ggCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTGTATCGAAAGGAAGAAGTCAATGCGCCATCTGGTTAAATATGTCGGAATTGGCctgc > 1:3919234/1‑149 (MQ=255) gCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCctgct < 2:4501480/149‑1 (MQ=255) gATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGt > 2:3110560/1‑149 (MQ=255) aTAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGtt < 1:3517381/149‑1 (MQ=255) aTAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGtt < 2:384618/149‑1 (MQ=255) tAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTa > 2:2177455/1‑149 (MQ=255) aaaTCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTAt < 1:130801/149‑1 (MQ=255) aTCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAATTCACTGCGCAATCTGGTTAAATATGTCGGAATTTGCCTGCTGGtgaggg > 2:4632468/1‑144 (MQ=255) aTCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATgg < 1:2501274/149‑1 (MQ=255) tCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATggg > 2:3740889/1‑149 (MQ=255) gAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCt > 2:2434927/1‑149 (MQ=255) gAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCt > 2:2217573/1‑149 (MQ=255) aaaTCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCtt < 2:4079299/149‑1 (MQ=255) aTCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGc < 2:1792724/149‑1 (MQ=255) aaCGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGc > 1:717731/1‑149 (MQ=255) aaCGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGc > 2:1679323/1‑149 (MQ=255) aCGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGACTTGGCCTGCTGGTTATGGGGCTTGCGGcc > 1:3844293/1‑149 (MQ=255) cGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCt < 1:4263523/149‑1 (MQ=255) gCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCtg > 2:1359680/1‑149 (MQ=255) cTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCtgt > 1:532880/1‑149 (MQ=255) | GATGCCTTTATGGCTGAACACTGGATGGAAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGT > CP009273/3603078‑3603374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |