| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,636,207 | T→A | 9.3% | T96S (ACT→TCT) | rsmJ ← | 16S rRNA m(2)G1516 methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,636,207 | 0 | T | A | 9.3% | 969.6 / 70.2 | 281 | T96S (ACT→TCT) | rsmJ | 16S rRNA m(2)G1516 methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (141/114); new base A (14/12); total (155/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
Only 100 of 289 total aligned reads displayed.
TCCTGCAACCAGCCGCCGATTTCCGCATCCGCATAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGC > CP009273/3636059‑3636355 | tCCTGCAACCAGCCGCCGATTTCCGCATCCGCATAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGt < 1:4053421/149‑1 (MQ=255) ccAGCCGCCGATTTCCGCATCCGCATAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATcca > 1:690947/1‑149 (MQ=255) ccAGCCGCCGATTTCCGCATCCGCATAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATcca < 1:3496907/149‑1 (MQ=255) gccgccGATTTCCGCATCCGCATAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATccacca > 2:2822574/1‑149 (MQ=255) ccgccgATTTCCGCATCCGCATAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCcaccac < 1:609775/149‑1 (MQ=255) cgccgATTTCCGCATCCGCATAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACcaca > 1:2634242/1‑149 (MQ=255) ccgATTTCCGCATCCGCATAACCACGCGCTAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATc < 2:3860812/149‑1 (MQ=255) ccgATTTCCGCATCCGCATAACCACGCGCTAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATc < 2:2987656/149‑1 (MQ=255) ccgATTTCCGCATCCGCATAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATc > 2:3960244/1‑149 (MQ=255) cgATTTCCGCATCCGCATAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATcc < 2:3577525/149‑1 (MQ=255) cgATTTCCGCATCCGCATAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATcc > 2:3403870/1‑149 (MQ=255) atccgcatAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAaataat < 2:152559/149‑1 (MQ=255) tccgcatAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATc < 1:1025434/149‑1 (MQ=255) tccgcatAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGAGGCATCCACCACATCCGGCAAATAATc > 1:224645/1‑149 (MQ=255) ccgcatAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCg < 1:1634224/149‑1 (MQ=255) aaCCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTa > 1:2017329/1‑149 (MQ=255) aCCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTaa < 2:718858/149‑1 (MQ=255) aCCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTaa > 1:436930/1‑149 (MQ=255) ccACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAAt < 1:3077207/149‑1 (MQ=255) ccACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAAt < 2:4124385/149‑1 (MQ=255) aCGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGc > 2:307783/1‑149 (MQ=255) cgcCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCa < 1:996392/149‑1 (MQ=255) cgcCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCa < 1:1602220/149‑1 (MQ=255) cgcCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCa < 1:3333301/149‑1 (MQ=255) ccAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCAcc > 1:321026/1‑149 (MQ=255) ggCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCt > 2:3947976/1‑149 (MQ=255) ggCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCt > 2:3052379/1‑149 (MQ=255) ccGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCttt < 2:2742333/149‑1 (MQ=255) ccGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCttt > 2:187429/1‑149 (MQ=255) cgtcgtCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTc < 2:2613371/149‑1 (MQ=255) gtcgtcGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCg > 1:968481/1‑149 (MQ=255) gtcgtcGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCg > 1:4422066/1‑149 (MQ=255) gtcgAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCa > 1:4659663/1‑149 (MQ=255) tcgAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCAc > 2:1891062/1‑149 (MQ=255) tcgAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCAGCGCGCCCAAGTCCTGCAGAGGCATCCACCACATCCGGCCCATAATCGCCTTTAATGCCCACCGCTTTCGCCAc > 1:1215077/1‑149 (MQ=255) gcgcGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCa > 2:2946045/1‑149 (MQ=255) ggCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACcgc > 1:3967723/1‑149 (MQ=255) gCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACcgcg > 2:4391005/1‑149 (MQ=255) gCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACcgcg > 1:1295071/1‑149 (MQ=255) gCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACcgcg > 2:2182118/1‑149 (MQ=255) aaCCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGac > 2:587445/1‑149 (MQ=255) cACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGaccac < 1:2185712/149‑1 (MQ=255) tGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCAccgc > 2:1499460/1‑149 (MQ=255) ttACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGAGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGaa < 2:4028344/149‑1 (MQ=255) aCGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAAtt < 2:3552407/149‑1 (MQ=255) cGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAAttt < 2:4354513/149‑1 (MQ=255) cTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGc > 2:3335958/1‑149 (MQ=255) ccAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGt < 1:4555653/149‑1 (MQ=255) ccAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGt > 2:777879/1‑149 (MQ=255) ccAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGt < 1:3442451/149‑1 (MQ=255) ccAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGt > 2:160708/1‑149 (MQ=255) cAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGAGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTc > 1:4264709/1‑149 (MQ=255) cAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGAGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTc > 2:4569482/1‑149 (MQ=255) aGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCg > 1:1185620/1‑149 (MQ=255) gCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCgg < 1:906355/149‑1 (MQ=255) aTCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGAGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTg > 1:2677719/1‑149 (MQ=255) gCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGcc > 1:147272/1‑149 (MQ=255) gCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGcc > 1:3576236/1‑149 (MQ=255) cACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCa > 2:4053578/1‑149 (MQ=255) cgcgGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGAGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATc > 1:3158823/1‑149 (MQ=255) gCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTc < 2:4105012/149‑1 (MQ=255) gCAGCCGACTGAAGCCAGTACAAAGGAATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTc > 2:1274253/1‑149 (MQ=255) aGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCg > 1:1599822/1‑149 (MQ=255) gCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGc > 2:3695860/1‑149 (MQ=255) gCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGc > 2:574022/1‑149 (MQ=255) gCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTGTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGc > 2:574120/1‑149 (MQ=255) cGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCca < 2:3671406/149‑1 (MQ=255) cGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCca > 1:2947442/1‑149 (MQ=255) cGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCca < 2:1335291/149‑1 (MQ=255) gACTGAAGCCAGTACAAAGGCCTCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGACTTTGCGTCGGTGCGCCATCGCTCCGCcac > 1:1776294/1‑148 (MQ=255) aCTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCcaac > 1:4295541/1‑149 (MQ=255) gAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACaaa > 1:2133183/1‑149 (MQ=255) gAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACaaa > 1:4482688/1‑149 (MQ=255) aGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAAt > 1:2878388/1‑149 (MQ=255) aGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAAt > 1:3883267/1‑149 (MQ=255) aGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAAt > 1:1523901/1‑149 (MQ=255) gTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATcaaca < 2:237569/149‑1 (MQ=255) tACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATcaacaa > 1:1112949/1‑149 (MQ=255) cAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAg > 1:3633241/1‑149 (MQ=255) aaaGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGa > 1:1587945/1‑149 (MQ=255) aaGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAACTCAACAAAGAt > 2:3820855/1‑149 (MQ=255) aaGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGAt > 2:3172207/1‑149 (MQ=255) aaGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGAt > 2:214162/1‑149 (MQ=255) ggCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATgc < 1:663600/149‑1 (MQ=255) tCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATgccgcc < 2:4242572/149‑1 (MQ=255) tCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATgccgcc > 2:4546792/1‑149 (MQ=255) tCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATgccgcc > 1:2925216/1‑149 (MQ=255) gcgcCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCaa < 1:636300/149‑1 (MQ=255) gcgcCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCaa < 1:2320352/149‑1 (MQ=255) gcCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGt < 2:690947/149‑1 (MQ=255) aaGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTg < 2:3273958/149‑1 (MQ=255) aGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTgg > 2:2485836/1‑149 (MQ=255) gCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAAGGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCtcatc < 2:887553/149‑1 (MQ=255) cAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCtcatca < 2:501106/149‑1 (MQ=255) cAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCtcatca < 2:1106435/149‑1 (MQ=255) aGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCAc < 1:1948709/149‑1 (MQ=255) gTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACg > 1:2848244/1‑149 (MQ=255) gTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACg > 1:4190706/1‑149 (MQ=255) tGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGc < 1:440300/149‑1 (MQ=255) tGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGc < 1:819844/149‑1 (MQ=255) | TCCTGCAACCAGCCGCCGATTTCCGCATCCGCATAACCACGCGCCAGGCCGTCGTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGC > CP009273/3636059‑3636355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |