| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,308,595 | C→A | 5.7% | E277* (GAG→TAG) | phnJ ← | carbon‑phosphorus lyase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,308,595 | 0 | C | A | 5.7% | 1220.6 / 37.2 | 315 | E277* (GAG→TAG) | phnJ | carbon‑phosphorus lyase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (161/136); new base A (9/9); total (170/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
Only 100 of 316 total aligned reads displayed.
GGTCTTCCCGGAGCCGGATTCCCCGACAATGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCTGAACGGTGAACGGGTGATCGTC > CP009273/4308447‑4308742 | ccGGAGCCGGATTCCCCGACAATGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTAGCTCTGt < 1:2165363/149‑1 (MQ=255) cGGAGCCGGATTCCCCGACAATGCCCAGCACTTCCCCCGGCCATAAATCCAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGtt < 2:1168112/149‑1 (MQ=255) cGGAGCCGGATTCCCCGACAATGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAACGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGtt < 2:2903786/149‑1 (MQ=255) ggAGCCGGATTCCCCGACAATGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTg < 2:4630264/149‑1 (MQ=255) aGCCGGATTCCCCGACAATGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTggc > 1:932392/1‑149 (MQ=255) ggATTCCCCGACAATGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTAGCTCTGTTGGCGGCa > 2:1629712/1‑149 (MQ=255) gATTCCCCGACAATGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCaa > 1:1446287/1‑149 (MQ=255) aTTCCCCGACAATGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCaat < 1:4253027/149‑1 (MQ=255) ttCCCCGACAATGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCaata < 1:3249024/149‑1 (MQ=255) ttCCCCGACAATGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCaata > 2:722393/1‑149 (MQ=255) cccGACAATGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATc < 2:3306687/149‑1 (MQ=255) gACAATGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGt > 2:1766391/1‑149 (MQ=255) gACAATGCCCAGCACTTCCCCCGGCCAGAAATCAAAAGAGACAGCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGt < 2:2529377/149‑1 (MQ=255) aaTGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATc > 1:3077946/1‑149 (MQ=255) aTGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCg > 1:2296278/1‑149 (MQ=255) aTGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCg > 1:556138/1‑149 (MQ=255) gCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGa > 2:3966190/1‑149 (MQ=255) gCCCAGCACGTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGa < 1:4319691/149‑1 (MQ=255) aCTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACa > 2:3844821/1‑149 (MQ=255) ttCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACaaa > 2:4176571/1‑149 (MQ=255) cccccGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACa < 2:4515909/149‑1 (MQ=255) ccccGGCCATAACTCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACAt < 1:440823/149‑1 (MQ=255) ccGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGc > 1:1054632/1‑149 (MQ=255) ccGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTAGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGc < 1:48892/149‑1 (MQ=255) gCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGt > 1:4135153/1‑149 (MQ=255) ccATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGtt < 1:523328/149‑1 (MQ=255) ccATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGtt < 1:3844748/149‑1 (MQ=255) ccATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGtt < 1:3875863/149‑1 (MQ=255) cATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGttt > 2:1404382/1‑149 (MQ=255) cATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTAGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGttt < 2:1170627/149‑1 (MQ=255) aTAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTc < 1:3043537/149‑1 (MQ=255) aTAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTc < 1:2709684/149‑1 (MQ=255) aTAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTc > 2:3981545/1‑149 (MQ=255) aaaTCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCg > 2:3538101/1‑149 (MQ=255) aaTCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCgg > 2:4128929/1‑149 (MQ=255) aaaaGAGACATCGCTAAAGCCTTTGCCCGGCGCGTACAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTc > 1:2891723/1‑149 (MQ=255) aaaGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCa > 2:2114409/1‑149 (MQ=255) aaaGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCa < 2:2000515/149‑1 (MQ=255) cagagACCTCGCTACAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCAt < 2:4405285/148‑1 (MQ=255) agaCATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCa > 1:1035055/1‑149 (MQ=255) gaCATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATACTCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAg > 2:3783386/1‑149 (MQ=255) gaCATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAg > 1:1596650/1‑149 (MQ=255) cATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGca > 1:4109552/1‑149 (MQ=255) aTCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGcac < 2:2090215/149‑1 (MQ=255) tAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACtt > 1:2602454/1‑149 (MQ=255) aaaGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTtc > 1:3143604/1‑149 (MQ=255) aGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTtcat > 1:2523381/1‑149 (MQ=255) aGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTAGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTtcat > 1:4268027/1‑149 (MQ=255) ccTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTtcatca > 2:1092384/1‑149 (MQ=255) cTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCaa < 2:3613121/149‑1 (MQ=255) cTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCaa < 2:1277104/149‑1 (MQ=255) cTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCaa < 2:300416/149‑1 (MQ=255) cTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCaa > 1:3020164/1‑149 (MQ=255) cccGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAg < 1:621878/149‑1 (MQ=255) ggCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCtg < 1:1350263/149‑1 (MQ=255) aGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGAt > 1:1533756/1‑149 (MQ=255) ggTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATc > 2:1872188/1‑149 (MQ=255) gggTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGc < 1:722393/149‑1 (MQ=255) gTCAGGTTATTGGCCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAg < 1:3339925/149‑1 (MQ=255) tCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGa < 1:2084024/149‑1 (MQ=255) cAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGAt < 1:3566753/149‑1 (MQ=255) aGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGTGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATg < 2:1153520/149‑1 (MQ=255) ggTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATgg < 2:2624143/149‑1 (MQ=255) gTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGgc > 2:2373993/1‑149 (MQ=255) gTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGgc > 1:2386080/1‑149 (MQ=255) aTTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCa > 2:1693591/1‑149 (MQ=255) aTTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCa > 2:2305777/1‑149 (MQ=255) ttGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCAt < 2:550106/149‑1 (MQ=255) tgcccGACAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATg < 1:4370003/146‑1 (MQ=255) tGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATg < 2:3499143/149‑1 (MQ=255) tGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATg < 2:2868225/149‑1 (MQ=255) tGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGAGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATg < 1:4370046/149‑1 (MQ=255) gACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATgg > 1:654835/1‑149 (MQ=255) ccGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCt > 2:3437275/1‑149 (MQ=255) cGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTc < 1:3721951/149‑1 (MQ=255) aaaGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCAt > 1:1338805/1‑149 (MQ=255) aaaGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCAt > 2:4476223/1‑149 (MQ=255) aaaGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCAt > 1:2643911/1‑149 (MQ=255) aaaGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCAt > 1:3814752/1‑149 (MQ=255) aaaGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCAt > 2:3797703/1‑149 (MQ=255) aaaGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCAt > 1:2801421/1‑149 (MQ=255) aaaGTAACGGTTGATTCATTGGTTTTTTGCCTAGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCAt > 2:3083362/1‑149 (MQ=255) aaCGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCAc < 1:1870398/149‑1 (MQ=255) ggTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCActgc < 2:664197/149‑1 (MQ=255) gTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCActgct > 1:4005098/1‑149 (MQ=255) ttGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCActgctg > 2:421763/1‑149 (MQ=255) gATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCtgaa < 2:1596650/149‑1 (MQ=255) gATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCtgaa > 2:2565003/1‑149 (MQ=255) aTTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCtgaacggtg > 1:3673425/1‑149 (MQ=255) ttGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCtgaacggtga > 2:505043/1‑149 (MQ=255) tttttGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCTGAACGGTGAACggg < 1:4181320/149‑1 (MQ=255) tttGCCTAGCTCTGGTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCTGAACGGTGAACGGGTg < 1:4440393/149‑1 (MQ=255) ttGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCTGAACGGTGAACGGGTGa < 1:2432892/149‑1 (MQ=255) tGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCTGAACGGTGAACGGGTGAt < 2:3569708/149‑1 (MQ=255) gCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCTGAACGGTGAACGGGTGAtc > 1:4562816/1‑149 (MQ=255) cTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCTGAACGGTGACCGGGTGAtcgt > 2:2776699/1‑149 (MQ=255) tCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCTGAACGGTGAACGGGTGAtcgtc > 2:1574028/1‑149 (MQ=255) tCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCTGAACGGTGAACGGGTGAtcgtc < 2:3705223/149‑1 (MQ=255) tCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCTGAACGGTGAACGGGTGAtcgtc > 2:4674416/1‑149 (MQ=255) tCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCTGAACGGTGAACGGGTGAtcgtc < 2:1368572/149‑1 (MQ=255) | GGTCTTCCCGGAGCCGGATTCCCCGACAATGCCCAGCACTTCCCCCGGCCATAAATCAAAAGAGACATCGCTAAAGCCTTTGCCCGGCGCGTAAAGGTGGGTCAGGTTATTGACCGAAAGTAACGGTTGATTCATTGGTTTTTTGCCTCGCTCTGTTGGCGGCAATAATCGGTATCGGAGCAGACAAACATGCGGTTTCCGGCGTCATCCAGCACCACTTCATCAAGATAGCTGTGGGTCGATCCGCAGATGGCGCATGGCTCATCCCACTGCTGAACGGTGAACGGGTGATCGTC > CP009273/4308447‑4308742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |