| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,603,125 | A→C | 7.2% | T300P (ACG→CCG) | yjjU → | putative patatin‑like family phospholipase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,603,125 | 0 | A | C | 7.2% | 598.4 / 6.0 | 231 | T300P (ACG→CCG) | yjjU | putative patatin‑like family phospholipase |
| Reads supporting (aligned to +/- strand): ref base A (103/103); new base C (22/2); total (125/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.50e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 234 total aligned reads displayed.
GCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACC > CP009273/4602977‑4603272 | gCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCa < 2:1110708/149‑1 (MQ=255) cAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAc < 1:1137623/149‑1 (MQ=255) aaTTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCCCg > 2:3988367/1‑149 (MQ=255) aTTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACgg < 2:2117059/149‑1 (MQ=255) tttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGt < 1:1837987/149‑1 (MQ=255) tttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGt > 2:2907472/1‑149 (MQ=255) ttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGtt < 1:1312190/149‑1 (MQ=255) ttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGtt < 2:1361582/149‑1 (MQ=255) aTTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTgg > 2:3182678/1‑149 (MQ=255) gagaAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACACGCCACGGTTGGCaa > 1:1821693/1‑149 (MQ=255) aaaCCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCt < 2:1619715/149‑1 (MQ=255) aaCCACCGGGCAAGCTTCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTa < 2:1272383/149‑1 (MQ=255) accaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTAt < 2:2959635/149‑1 (MQ=255) ccaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTAtt < 2:1855433/149‑1 (MQ=255) ccaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTAtt < 2:4190449/149‑1 (MQ=255) caccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTa < 1:3742704/149‑1 (MQ=255) accGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTaa < 1:4636777/149‑1 (MQ=255) accGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTaa < 2:3669854/149‑1 (MQ=255) ccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAAc < 2:2621156/149‑1 (MQ=255) ggCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGGTGGCACTCTAtttaatgt > 2:3168192/1‑143 (MQ=255) ggCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACGCGCCACGCTTGGGAAGCTATTAACTGa > 1:623311/1‑149 (MQ=255) aGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTTCTCGCCACCGTGGGCAAGCAATTAAATTaaaaa > 1:2010314/1‑149 (MQ=255) aGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGaaaaa < 2:481734/149‑1 (MQ=255) cTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAgc < 1:2379284/149‑1 (MQ=255) cTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAgc < 2:3058848/149‑1 (MQ=255) tGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAgcg > 2:175859/1‑149 (MQ=255) tGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAgcg < 1:3185939/149‑1 (MQ=255) gctgATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAgcgc < 2:4276283/146‑1 (MQ=255) gCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAgcgc < 2:3117307/149‑1 (MQ=255) cGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGcgcc < 1:2954941/149‑1 (MQ=255) gATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCACGCCACGGTTGGCAAGCTATTAACTGAAAAAGcgccgc > 2:346668/1‑149 (MQ=255) tttttCGAAATTTATCCGCCGAAGCCATTACTTAGTATCGCGGTGGGCAGTCGTATTCCGGCGGTGCGTTAATACTATAAACTTGGGCGTTTATGGGGTCGTTATTTCCTCGCCACGGTGGGCAAGATATTAACTGAAAAAGCGCCGCt < 1:2426412/146‑1 (MQ=255) atTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTa > 2:1128811/1‑149 (MQ=255) cGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTGGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTAccc < 2:4621870/149‑1 (MQ=255) gAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGGTGGCAAGCTATTAACTGAAAAAGCGCCGCGTACCCg > 2:1668269/1‑149 (MQ=255) aaTTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTACTCGCCCCGGGTGGCAAGCGATTAACTGAAAAATCGCCGCTTACCCGcc > 1:2567948/1‑149 (MQ=255) aaTTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTACACGCCCCCGGTGGCCACCGATTAACAGAAAAAGCGCCCCCTAcccccc > 1:3281829/1‑149 (MQ=255) aTTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAAATTGGGCGTTTATGCGGTCGTTATTTAATCTCCCCGGGTTGCAAGAAATAAACTTAAAAATCGCCGCTTACCCCCCa > 1:4252424/1‑149 (MQ=255) tttATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGTTGGCAAGCTATTAAATGAAAAAGCGCCGCATACCCGCCaa > 1:701107/1‑148 (MQ=255) ttATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATc < 1:3455705/149‑1 (MQ=255) ccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCTTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGcc < 2:56814/149‑1 (MQ=255) aaGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTGCACGCCACGGTTGGGCAGCTATTAAATGAAAAAACGCCCCATAACCCCCAACTGGTGCCact > 1:3615585/1‑147 (MQ=255) aaGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCCCGGGTTGCAAGCGATTAACTGAAAAAGCGCCCCATACCCCCCCACTGGTGCCAgg > 1:1478833/1‑148 (MQ=255) aaGCAATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCAATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgt < 1:2846172/149‑1 (MQ=255) gCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTCCTCGCCACGGGTGGCAAGCGATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtgg > 2:1721238/1‑149 (MQ=255) gCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTAACCGCCATCTGGTGCCAgtgg > 2:1721159/1‑149 (MQ=255) tAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGAAGCCgg > 2:3407839/1‑149 (MQ=255) gTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACGCGCCCCCGGTGGCAAGCGAATAAAAGAAAAAACGCCCCGTACCCCCCCTCAGGTGCCACGGGTGACGCCGGaa > 1:1068518/1‑149 (MQ=255) tATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTAGCCACGGTTGGCAAGCTATTAAATTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAAt > 1:3044615/1‑149 (MQ=255) tATCGCGAGTGGCAGTCGGTTTCCGGCGCTGCGTGAATACTATAAACTTGGGCTTTTATGCGGTCTTTATTTCCTCGCCACGGTGGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAAt < 1:3952622/149‑1 (MQ=255) aTCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATc < 2:1074492/149‑1 (MQ=255) tCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTACTCGCCCCGGTTGGCAAGCGATTAAATGAAAAAGCGCCCCGTACCCGCCAACTGGGGCCAGGGGTGACGcccgcatac > 1:2914597/1‑142 (MQ=255) tCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCg < 1:1097984/149‑1 (MQ=255) gcgcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCTTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGAt < 1:3432163/149‑1 (MQ=255) gcgcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTGCGCGCCCCCGGTGGGCAGCGATTAAATTAAAAAGCGCCCCGTACCCCCCCACCTGTGGCCGTGGTGTCGCCGGGATCGAt > 1:4145888/1‑149 (MQ=255) gcgcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTACTCGCCCCCGTTTGCAAGCGATTTAATGAAAAAACGCCCCGTACCCCCCCACGGGGGCCACTGGGGAAGCCGGGAACGAt > 1:2196488/1‑149 (MQ=255) gcgcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGAt < 1:2704905/149‑1 (MQ=255) gcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACCGGTGGCAAGCTCTTAACAGAAAAACCGCCGCATAACCGCCAACAGGTGCCAGTGGTGACGCCGGTATAGATTg > 2:4594783/1‑149 (MQ=255) tGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCTCGGTTGGCAAGCTATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCa < 2:3482962/149‑1 (MQ=255) cAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTc < 2:139819/149‑1 (MQ=255) aGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACACGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCAGGTGCCAGTGGTGACGCCGGAATAGATTGTCATTcc > 2:4451109/1‑149 (MQ=255) aTTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTgc < 2:2552522/149‑1 (MQ=255) ttCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTCCACGCCACGGTTGGCCACCGATTAACGGAAAAAGCGCCGCTTACCCGCCCTCTGGTGCCAGTGGTGACGCCCGAATCGAATGTCATTCCGCCTgcg > 2:4008166/1‑149 (MQ=255) ccGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCGATTAACTGTAAAAGCGCCGCTTAACCGCCCTCTGGGGCCCGGGGGGACGCCGGTCTAGATTTTCATtgcgcctgcgcc > 2:593760/1‑149 (MQ=255) ggCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAg < 2:3139603/149‑1 (MQ=255) tGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACGAGCCCCGGTTGGCCAGCTATTAACGGAAAAAGCGCCGCGTAACCCCCATCTGGTGCCCCTGGTGTCGCCGGAAACGATTGTAAATCCGCCAGCGCCACGCGcc > 1:2660192/1‑149 (MQ=255) tGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTGCTCGCCACCGTTGGCAAGCTATTAACAGAAAAAGCGCCGCTTACCCCCCATCTGGTGCCAGTGGTGACGCCCGAATCGATTGTCATTCCCCCTGCGCCAGTCGCCAACg > 2:71833/1‑149 (MQ=255) gAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAACCTATTAACTGAAAAAGCGCCGCTTACCCGCCCACTGGTGCCCGTGGTGACGCCGGAATCGATTGTCATTACGCCTGCGCCCCTCGCCCACGa > 2:3668155/1‑149 (MQ=255) aaGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGTTTGCAAGCGATTAAATGAAAAATCGCCGCTTACCCCCCCGCTGGTGCCAGTGGTGACGCCCGCATAGATTTTAAATGCGCCAGCGCCAGTCGCCAACGAt > 1:2281238/1‑149 (MQ=255) aGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATa < 1:4590003/149‑1 (MQ=255) gACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATAc < 2:1680896/149‑1 (MQ=255) gACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATAc < 2:1436627/149‑1 (MQ=255) ataAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCCCGGTTTGCAAGCGATTAACTGAAAAAGCGCCCCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCAGCGCCAGTCGCCAACCATAAGCTg > 2:1451054/1‑149 (MQ=255) aaCTTGGGCTTTTATGCGGTCGTTATGTCCTCGCCACGGTTGGCAAGCTTTTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGtt < 1:1602652/149‑1 (MQ=255) aaCTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGtt < 2:866801/149‑1 (MQ=255) aaCTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCGTACCCGCCAACTGGTGCCAGTGGTGACGCCGGAATCGATTTTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGtt > 2:2708953/1‑149 (MQ=255) aaCTTGGGCGTTTATGCGGTCGTTATTTCCTAGCCACGGGTGGCCAGCGATTAACTGAAAAAGCGCCCCGTACCCGCCATCTGGTGCCACTGGTGACGCCGGAAACGATTGTCAATACGCCAGCGCCACTCGCCAACCAAACGCggggt > 2:1328180/1‑147 (MQ=255) cTTGGGCGTTTATGCGGTCGTGAATTCCACCCCACCGTTGGCAAGCAATTAACAGAAAAACCGCCCCATACCCCCCCACGGGTGCCACTGGTGACCCCCGCAACCATTGTCAATCCCCCAGCGCCACTCCCCCACCAAACCCGGGTTGc > 2:112310/1‑149 (MQ=255) cGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGt < 1:3002778/149‑1 (MQ=255) gTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTg < 2:623311/149‑1 (MQ=255) ttATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAg < 2:3218734/149‑1 (MQ=255) ttATGCGGTCGTTATCTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAg < 2:1543038/149‑1 (MQ=255) tttGCGGTCGTTATTTCCTCGCCACGGTTGGAAAGCTATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGc < 1:2799684/147‑1 (MQ=255) tGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGa < 2:2520731/149‑1 (MQ=255) ggTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGc < 2:2412096/149‑1 (MQ=255) ggTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGc > 2:3470759/1‑149 (MQ=255) tCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTc < 1:175859/149‑1 (MQ=255) gTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCg > 1:4438198/1‑149 (MQ=255) ttATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTcccc > 1:3142952/1‑147 (MQ=255) ttATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGc > 1:250902/1‑149 (MQ=255) aTTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAg > 2:1931079/1‑149 (MQ=255) tttCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAgg > 1:1574756/1‑149 (MQ=255) tttCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAgg > 2:2666621/1‑149 (MQ=255) tttCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAgg > 2:3847667/1‑149 (MQ=255) cTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa < 1:521159/149‑1 (MQ=255) cTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa < 1:2128250/149‑1 (MQ=255) tCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAAc > 2:1151370/1‑149 (MQ=255) gCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGa > 1:1050547/1‑149 (MQ=255) cACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAcc > 1:3169030/1‑149 (MQ=255) cACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAcc > 2:3714801/1‑149 (MQ=255) | GCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACC > CP009273/4602977‑4603272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |